RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 TFIP11Q9UBB9 837 aaKnown RBP19.23■□□□□ 0.67
MCF2L-229ENST00000488765 APPP05067 770 aa19.23■□□□□ 0.67
MCF2L-229ENST00000488765 FUCA2Q9BTY2 467 aa19.23■□□□□ 0.67
MCF2L-229ENST00000488765 USP16Q9Y5T5 823 aa19.23■□□□□ 0.67
MCF2L-229ENST00000488765 MAP3K4Q9Y6R4 1608 aa19.23■□□□□ 0.67
MCF2L-229ENST00000488765 C8orf58Q8NAV2 365 aa19.23■□□□□ 0.67
MCF2L-229ENST00000488765 CCDC34Q96HJ3 373 aa19.23■□□□□ 0.67
MCF2L-229ENST00000488765 IL25Q9H293 177 aa19.23■□□□□ 0.67
MCF2L-229ENST00000488765 CBX8Q9HC52 389 aa19.23■□□□□ 0.67
MCF2L-229ENST00000488765 SLC4A10Q6U841 1118 aa19.22■□□□□ 0.67
MCF2L-229ENST00000488765 DNAJC25Q9H1X3 360 aa19.22■□□□□ 0.67
MCF2L-229ENST00000488765 KIF1BO60333 1816 aa19.22■□□□□ 0.67
MCF2L-229ENST00000488765 IQSEC2Q5JU85 1478 aa19.22■□□□□ 0.67
MCF2L-229ENST00000488765 FRMPD1Q5SYB0 1578 aa19.22■□□□□ 0.67
MCF2L-229ENST00000488765 CFAP74Q9C0B2 1584 aa19.22■□□□□ 0.67
MCF2L-229ENST00000488765 STX6O43752 255 aa19.22■□□□□ 0.67
MCF2L-229ENST00000488765 ZSCAN22P10073 491 aaPredicted RBP19.22■□□□□ 0.67
MCF2L-229ENST00000488765 CCDC191Q8NCU4 936 aa19.22■□□□□ 0.67
MCF2L-229ENST00000488765 TYRO3Q06418 890 aa19.21■□□□□ 0.67
MCF2L-229ENST00000488765 SLC20A2Q08357 652 aa19.21■□□□□ 0.67
MCF2L-229ENST00000488765 CUL4AQ13619 759 aa19.21■□□□□ 0.67
MCF2L-229ENST00000488765 RBM33Q96EV2 1170 aaKnown RBP19.21■□□□□ 0.67
MCF2L-229ENST00000488765 LRRFIP2Q9Y608 721 aaKnown RBP19.21■□□□□ 0.67
MCF2L-229ENST00000488765 MROH2AA6NES4 1674 aa19.21■□□□□ 0.67
MCF2L-229ENST00000488765 SART3Q15020 963 aaKnown RBP19.21■□□□□ 0.67
MCF2L-229ENST00000488765 RRS1Q15050 365 aaKnown RBP19.21■□□□□ 0.67
MCF2L-229ENST00000488765 RASSF4Q9H2L5 321 aa19.21■□□□□ 0.67
MCF2L-229ENST00000488765 ABCC3O15438 1527 aa19.21■□□□□ 0.67
MCF2L-229ENST00000488765 FAM83GA6ND36 823 aa19.21■□□□□ 0.67
MCF2L-229ENST00000488765 PRKAR2BP31323 418 aa19.21■□□□□ 0.67
MCF2L-229ENST00000488765 SMARCE1Q969G3 411 aa19.21■□□□□ 0.67
MCF2L-229ENST00000488765 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.21■□□□□ 0.67
MCF2L-229ENST00000488765 PHACTR3Q96KR7 559 aa19.2■□□□□ 0.66
MCF2L-229ENST00000488765 MRVI1Q9Y6F6 885 aa19.2■□□□□ 0.66
MCF2L-229ENST00000488765 SKILP12757 684 aa19.2■□□□□ 0.66
MCF2L-229ENST00000488765 CCDC83Q8IWF9 413 aa19.2■□□□□ 0.66
MCF2L-229ENST00000488765 FAM200AQ8TCP9 573 aa19.2■□□□□ 0.66
MCF2L-229ENST00000488765 DRC1Q96MC2 740 aa19.2■□□□□ 0.66
MCF2L-229ENST00000488765 MEIS3Q99687 375 aa19.2■□□□□ 0.66
MCF2L-229ENST00000488765 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.2■□□□□ 0.66
MCF2L-229ENST00000488765 A0A1W2PP64 1363 aa19.2■□□□□ 0.66
MCF2L-229ENST00000488765 DHX16O60231 1041 aaKnown RBP19.19■□□□□ 0.66
MCF2L-229ENST00000488765 TPM3P06753 285 aa19.19■□□□□ 0.66
MCF2L-229ENST00000488765 CLCN6P51797 869 aa19.19■□□□□ 0.66
MCF2L-229ENST00000488765 TWISTNBQ3B726 338 aaPredicted RBP19.19■□□□□ 0.66
MCF2L-229ENST00000488765 UNC5CLQ8IV45 518 aa19.19■□□□□ 0.66
MCF2L-229ENST00000488765 HECW2Q9P2P5 1572 aa19.19■□□□□ 0.66
MCF2L-229ENST00000488765 ARHGAP29Q52LW3 1261 aa19.19■□□□□ 0.66
MCF2L-229ENST00000488765 NME9Q86XW9 330 aa19.19■□□□□ 0.66
MCF2L-229ENST00000488765 DACT1Q9NYF0 836 aa19.19■□□□□ 0.66
MCF2L-229ENST00000488765 SMC3Q9UQE7 1217 aa19.19■□□□□ 0.66
MCF2L-229ENST00000488765 MYO1CO00159 1063 aa19.18■□□□□ 0.66
MCF2L-229ENST00000488765 E2F4Q16254 413 aa19.18■□□□□ 0.66
MCF2L-229ENST00000488765 MCCP23508 829 aa19.18■□□□□ 0.66
MCF2L-229ENST00000488765 PLA2G4AP47712 749 aa19.18■□□□□ 0.66
MCF2L-229ENST00000488765 ALDH1L2Q3SY69 923 aa19.18■□□□□ 0.66
MCF2L-229ENST00000488765 ERCC4Q92889 916 aaPredicted RBP19.18■□□□□ 0.66
MCF2L-229ENST00000488765 HDAC5Q9UQL6 1122 aa19.18■□□□□ 0.66
MCF2L-229ENST00000488765 EMILIN1Q9Y6C2 1016 aa19.18■□□□□ 0.66
MCF2L-229ENST00000488765 VWDEQ8N2E2 1590 aa19.18■□□□□ 0.66
MCF2L-229ENST00000488765 ZNF75DP51815 510 aa19.17■□□□□ 0.66
MCF2L-229ENST00000488765 ESYT1Q9BSJ8 1104 aa19.17■□□□□ 0.66
MCF2L-229ENST00000488765 FHOD1Q9Y613 1164 aa19.17■□□□□ 0.66
MCF2L-229ENST00000488765 DEPDC5O75140 1603 aa19.17■□□□□ 0.66
MCF2L-229ENST00000488765 LARGE1O95461 756 aa19.17■□□□□ 0.66
MCF2L-229ENST00000488765 F13A1P00488 732 aa19.17■□□□□ 0.66
MCF2L-229ENST00000488765 BMS1Q14692 1282 aaKnown RBP19.17■□□□□ 0.66
MCF2L-229ENST00000488765 POLKQ9UBT6 870 aa19.17■□□□□ 0.66
MCF2L-229ENST00000488765 ABCC11Q96J66 1382 aa19.17■□□□□ 0.66
MCF2L-229ENST00000488765 PDE1AP54750 535 aa19.17■□□□□ 0.66
MCF2L-229ENST00000488765 MAP3K11Q16584 847 aa19.17■□□□□ 0.66
MCF2L-229ENST00000488765 NECAB1Q8N987 351 aa19.17■□□□□ 0.66
MCF2L-229ENST00000488765 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.17■□□□□ 0.66
MCF2L-229ENST00000488765 TNMDQ9H2S6 317 aa19.17■□□□□ 0.66
MCF2L-229ENST00000488765 GOLGA6L4A6NEF3 574 aa19.16■□□□□ 0.66
MCF2L-229ENST00000488765 PNMA6AP0CW24 399 aaPredicted RBP19.16■□□□□ 0.66
MCF2L-229ENST00000488765 FAM177A1Q8N128 213 aaPredicted RBP19.16■□□□□ 0.66
MCF2L-229ENST00000488765 NUP62CLQ9H1M0 184 aa19.16■□□□□ 0.66
MCF2L-229ENST00000488765 IQGAP1P46940 1657 aa19.16■□□□□ 0.66
MCF2L-229ENST00000488765 SLU7O95391 586 aaKnown RBP19.15■□□□□ 0.66
MCF2L-229ENST00000488765 ZNF165P49910 485 aa19.15■□□□□ 0.66
MCF2L-229ENST00000488765 CEBPZQ03701 1054 aaKnown RBP19.15■□□□□ 0.66
MCF2L-229ENST00000488765 MBIPQ9NS73 344 aa19.15■□□□□ 0.66
MCF2L-229ENST00000488765 MYOM2P54296 1465 aa19.15■□□□□ 0.66
MCF2L-229ENST00000488765 RPAP1Q9BWH6 1393 aaPredicted RBP19.15■□□□□ 0.66
MCF2L-229ENST00000488765 DIAPH1O60610 1272 aaKnown RBP19.15■□□□□ 0.66
MCF2L-229ENST00000488765 CEP85Q6P2H3 762 aa19.15■□□□□ 0.66
MCF2L-229ENST00000488765 KIF1BPQ96EK5 621 aa19.15■□□□□ 0.66
MCF2L-229ENST00000488765 ZSCAN26Q16670 478 aa19.14■□□□□ 0.66
MCF2L-229ENST00000488765 AK2P54819 239 aa19.14■□□□□ 0.65
MCF2L-229ENST00000488765 INTS4Q96HW7 963 aaKnown RBP19.14■□□□□ 0.65
MCF2L-229ENST00000488765 GJB2P29033 226 aa19.13■□□□□ 0.65
MCF2L-229ENST00000488765 LMAN1P49257 510 aa19.13■□□□□ 0.65
MCF2L-229ENST00000488765 SYCP1Q15431 976 aa19.13■□□□□ 0.65
MCF2L-229ENST00000488765 NUTM2GQ5VZR2 741 aa19.13■□□□□ 0.65
MCF2L-229ENST00000488765 LRRC8AQ8IWT6 810 aa19.13■□□□□ 0.65
MCF2L-229ENST00000488765 KDM5AP29375 1690 aaKnown RBP19.13■□□□□ 0.65
MCF2L-229ENST00000488765 F6X3S4 739 aa19.13■□□□□ 0.65
MCF2L-229ENST00000488765 MCM2P49736 904 aa19.13■□□□□ 0.65
MCF2L-229ENST00000488765 ERBB3P21860 1342 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 216.7 ms