RNA–Protein interactions for RNA: ENST00000487791.1

HBA1-204, Transcript of hemoglobin subunit alpha 1, humanhuman

TSL 1 (best)

Gene HBA1, Length 410 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HBA1-204ENST00000487791 ADRA2BP18089 450 aa29.7■■■□□ 2.35
HBA1-204ENST00000487791 SSFA2P28290 1259 aa29.7■■■□□ 2.35
HBA1-204ENST00000487791 R3HDM1Q15032 1099 aaKnown RBP29.7■■■□□ 2.35
HBA1-204ENST00000487791 ANO8Q9HCE9 1232 aaPredicted RBP29.7■■■□□ 2.35
HBA1-204ENST00000487791 COL5A3P25940 1745 aaPredicted RBP29.7■■■□□ 2.34
HBA1-204ENST00000487791 TJP1Q07157 1748 aa29.7■■■□□ 2.34
HBA1-204ENST00000487791 RPS6KA4O75676 772 aa29.69■■■□□ 2.34
HBA1-204ENST00000487791 ZNF827Q17R98 1081 aa29.69■■■□□ 2.34
HBA1-204ENST00000487791 TRAPPC3LQ5T215 181 aa29.67■■■□□ 2.34
HBA1-204ENST00000487791 TSR2Q969E8 191 aaKnown RBP29.67■■■□□ 2.34
HBA1-204ENST00000487791 USP16Q9Y5T5 823 aa29.67■■■□□ 2.34
HBA1-204ENST00000487791 MSH5O43196 834 aa29.66■■■□□ 2.34
HBA1-204ENST00000487791 ERBB4Q15303 1308 aa29.66■■■□□ 2.34
HBA1-204ENST00000487791 FANCIQ9NVI1 1328 aa29.66■■■□□ 2.34
HBA1-204ENST00000487791 A0A087WZG4 1122 aa29.65■■■□□ 2.34
HBA1-204ENST00000487791 DUSP27Q5VZP5 1158 aa29.65■■■□□ 2.34
HBA1-204ENST00000487791 CANXP27824 592 aaKnown RBP29.64■■■□□ 2.34
HBA1-204ENST00000487791 IL6STP40189 918 aaPredicted RBP29.64■■■□□ 2.34
HBA1-204ENST00000487791 INTS5Q6P9B9 1019 aaKnown RBP29.64■■■□□ 2.34
HBA1-204ENST00000487791 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.63■■■□□ 2.33
HBA1-204ENST00000487791 PSDA5PKW4 1024 aaPredicted RBP29.63■■■□□ 2.33
HBA1-204ENST00000487791 EIF2S2P20042 333 aaKnown RBP29.63■■■□□ 2.33
HBA1-204ENST00000487791 RFC4P35249 363 aa29.63■■■□□ 2.33
HBA1-204ENST00000487791 SLC16A10Q8TF71 515 aa29.63■■■□□ 2.33
HBA1-204ENST00000487791 ZBED9Q6R2W3 1325 aa29.63■■■□□ 2.33
HBA1-204ENST00000487791 LAMB4A4D0S4 1761 aa29.62■■■□□ 2.33
HBA1-204ENST00000487791 PHF14O94880 888 aa29.62■■■□□ 2.33
HBA1-204ENST00000487791 HDGFL1Q5TGJ6 251 aa29.62■■■□□ 2.33
HBA1-204ENST00000487791 QSER1Q2KHR3 1735 aa29.62■■■□□ 2.33
HBA1-204ENST00000487791 PRAMEF22A3QJZ6 481 aa29.61■■■□□ 2.33
HBA1-204ENST00000487791 SLFN5Q08AF3 891 aa29.61■■■□□ 2.33
HBA1-204ENST00000487791 ZBTB1Q9Y2K1 713 aa29.61■■■□□ 2.33
HBA1-204ENST00000487791 TWISTNBQ3B726 338 aaPredicted RBP29.6■■■□□ 2.33
HBA1-204ENST00000487791 PNPLA7Q6ZV29 1317 aa29.6■■■□□ 2.33
HBA1-204ENST00000487791 A1BGP04217 495 aa29.59■■■□□ 2.33
HBA1-204ENST00000487791 ZNF330Q9Y3S2 320 aaPredicted RBP29.59■■■□□ 2.33
HBA1-204ENST00000487791 ELL2O00472 640 aaPredicted RBP29.58■■■□□ 2.33
HBA1-204ENST00000487791 ZPR1O75312 459 aa29.58■■■□□ 2.33
HBA1-204ENST00000487791 CCDC30Q5VVM6 783 aa29.58■■■□□ 2.33
HBA1-204ENST00000487791 UBR3Q6ZT12 1888 aa29.58■■■□□ 2.33
HBA1-204ENST00000487791 C8orf58Q8NAV2 365 aa29.58■■■□□ 2.33
HBA1-204ENST00000487791 DBF4Q9UBU7 674 aaPredicted RBP29.58■■■□□ 2.33
HBA1-204ENST00000487791 KRT24Q2M2I5 525 aa29.57■■■□□ 2.32
HBA1-204ENST00000487791 MYH14Q7Z406 1995 aaKnown RBP29.56■■■□□ 2.32
HBA1-204ENST00000487791 EIF5P55010 431 aaKnown RBP29.56■■■□□ 2.32
HBA1-204ENST00000487791 EXOSC9Q06265 439 aaKnown RBP29.56■■■□□ 2.32
HBA1-204ENST00000487791 COL23A1Q86Y22 540 aaPredicted RBP29.56■■■□□ 2.32
HBA1-204ENST00000487791 ARXQ96QS3 562 aa29.56■■■□□ 2.32
HBA1-204ENST00000487791 STK31Q9BXU1 1019 aa29.56■■■□□ 2.32
HBA1-204ENST00000487791 SPINK5Q9NQ38 1064 aaPredicted RBP29.56■■■□□ 2.32
HBA1-204ENST00000487791 COL15A1P39059 1388 aa29.55■■■□□ 2.32
HBA1-204ENST00000487791 ARHGEF1Q92888 912 aaKnown RBP29.55■■■□□ 2.32
HBA1-204ENST00000487791 NECTIN2Q92692 538 aa29.53■■■□□ 2.32
HBA1-204ENST00000487791 DDX21Q9NR30 783 aaKnown RBP eCLIP29.53■■■□□ 2.32
HBA1-204ENST00000487791 HYPKQ9NX55 129 aa29.53■■■□□ 2.32
HBA1-204ENST00000487791 CT47B1P0C2W7 299 aaPredicted RBP29.52■■■□□ 2.32
HBA1-204ENST00000487791 MYL6BP14649 208 aa29.52■■■□□ 2.32
HBA1-204ENST00000487791 ZNF428Q96B54 188 aa29.52■■■□□ 2.32
HBA1-204ENST00000487791 CDCA7LQ96GN5 454 aa29.52■■■□□ 2.32
HBA1-204ENST00000487791 MTFR1LQ9H019 292 aa29.52■■■□□ 2.32
HBA1-204ENST00000487791 KIF6Q6ZMV9 814 aa29.51■■■□□ 2.31
HBA1-204ENST00000487791 NARFQ9UHQ1 456 aa29.51■■■□□ 2.31
HBA1-204ENST00000487791 TUBGCP6Q96RT7 1819 aa29.5■■■□□ 2.31
HBA1-204ENST00000487791 TRMT2AQ8IZ69 625 aaKnown RBP29.5■■■□□ 2.31
HBA1-204ENST00000487791 NLGN1Q8N2Q7 840 aa29.5■■■□□ 2.31
HBA1-204ENST00000487791 TSPYL6Q8N831 410 aa29.5■■■□□ 2.31
HBA1-204ENST00000487791 NBPF26B4DH59 902 aa29.49■■■□□ 2.31
HBA1-204ENST00000487791 NBPF10Q6P3W6 841 aaKnown RBP29.49■■■□□ 2.31
HBA1-204ENST00000487791 DZIP3Q86Y13 1208 aaKnown RBP29.49■■■□□ 2.31
HBA1-204ENST00000487791 NBPF15Q8N660 670 aa29.49■■■□□ 2.31
HBA1-204ENST00000487791 ZNF652Q9Y2D9 606 aa29.49■■■□□ 2.31
HBA1-204ENST00000487791 SPON1Q9HCB6 807 aa29.48■■■□□ 2.31
HBA1-204ENST00000487791 CHPF2Q9P2E5 772 aa29.48■■■□□ 2.31
HBA1-204ENST00000487791 USP42Q9H9J4 1324 aaKnown RBP29.47■■■□□ 2.31
HBA1-204ENST00000487791 VAMP4O75379 141 aa29.47■■■□□ 2.31
HBA1-204ENST00000487791 POLD1P28340 1107 aa29.47■■■□□ 2.31
HBA1-204ENST00000487791 PIP4K2AP48426 406 aaPredicted RBP29.47■■■□□ 2.31
HBA1-204ENST00000487791 RGL2O15211 777 aa29.46■■■□□ 2.31
HBA1-204ENST00000487791 AMIGO3Q86WK7 504 aa29.46■■■□□ 2.31
HBA1-204ENST00000487791 CASZ1Q86V15 1759 aa29.45■■■□□ 2.31
HBA1-204ENST00000487791 ZBTB7AO95365 584 aa29.45■■■□□ 2.31
HBA1-204ENST00000487791 TBC1D2BQ9UPU7 963 aa29.45■■■□□ 2.31
HBA1-204ENST00000487791 DDX58O95786 925 aaKnown RBP29.43■■■□□ 2.3
HBA1-204ENST00000487791 PDIA6Q15084 440 aa29.43■■■□□ 2.3
HBA1-204ENST00000487791 USPL1Q5W0Q7 1092 aa29.43■■■□□ 2.3
HBA1-204ENST00000487791 CLEC4GQ6UXB4 293 aa29.43■■■□□ 2.3
HBA1-204ENST00000487791 SMIM5Q71RC9 77 aa29.43■■■□□ 2.3
HBA1-204ENST00000487791 YTHDC1Q96MU7 727 aaKnown RBP29.43■■■□□ 2.3
HBA1-204ENST00000487791 ERVV-1B6SEH8 477 aa29.42■■■□□ 2.3
HBA1-204ENST00000487791 PDGFDQ9GZP0 370 aaPredicted RBP29.42■■■□□ 2.3
HBA1-204ENST00000487791 SLC4A2P04920 1241 aa29.4■■■□□ 2.3
HBA1-204ENST00000487791 GYS1P13807 737 aa29.4■■■□□ 2.3
HBA1-204ENST00000487791 COPS6Q7L5N1 327 aa29.4■■■□□ 2.3
HBA1-204ENST00000487791 SRP68Q9UHB9 627 aaKnown RBP29.4■■■□□ 2.3
HBA1-204ENST00000487791 ATF5Q9Y2D1 282 aaPredicted RBP29.4■■■□□ 2.3
HBA1-204ENST00000487791 C4AP0C0L4 1744 aa29.4■■■□□ 2.3
HBA1-204ENST00000487791 AIMP1Q12904 312 aaKnown RBP29.39■■■□□ 2.3
HBA1-204ENST00000487791 PROSER3Q2NL68 480 aa29.39■■■□□ 2.3
HBA1-204ENST00000487791 XAGE3Q8WTP9 111 aa29.39■■■□□ 2.3
HBA1-204ENST00000487791 MAP3K15Q6ZN16 1313 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms