RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 ZNF827Q17R98 1081 aa25.13■■□□□ 1.61
PCOLCE-208ENST00000487172 CRKLP46109 303 aaKnown RBP25.12■■□□□ 1.61
PCOLCE-208ENST00000487172 SOS1Q07889 1333 aaPredicted RBP25.12■■□□□ 1.61
PCOLCE-208ENST00000487172 MYH14Q7Z406 1995 aaKnown RBP25.11■■□□□ 1.61
PCOLCE-208ENST00000487172 LAMB4A4D0S4 1761 aa25.11■■□□□ 1.61
PCOLCE-208ENST00000487172 KRT24Q2M2I5 525 aa25.11■■□□□ 1.61
PCOLCE-208ENST00000487172 INTS5Q6P9B9 1019 aaKnown RBP25.11■■□□□ 1.61
PCOLCE-208ENST00000487172 TRMT2AQ8IZ69 625 aaKnown RBP25.11■■□□□ 1.61
PCOLCE-208ENST00000487172 AK7Q96M32 723 aa25.1■■□□□ 1.61
PCOLCE-208ENST00000487172 CCDC87Q9NVE4 849 aa25.1■■□□□ 1.61
PCOLCE-208ENST00000487172 RPS6KA4O75676 772 aa25.09■■□□□ 1.61
PCOLCE-208ENST00000487172 DUSP27Q5VZP5 1158 aa25.09■■□□□ 1.61
PCOLCE-208ENST00000487172 C8orf58Q8NAV2 365 aa25.09■■□□□ 1.61
PCOLCE-208ENST00000487172 CDCA7LQ96GN5 454 aa25.09■■□□□ 1.61
PCOLCE-208ENST00000487172 QSER1Q2KHR3 1735 aa25.09■■□□□ 1.61
PCOLCE-208ENST00000487172 TFCP2L1Q9NZI6 479 aa25.08■■□□□ 1.61
PCOLCE-208ENST00000487172 UBR3Q6ZT12 1888 aa25.08■■□□□ 1.61
PCOLCE-208ENST00000487172 FLAD1Q8NFF5 587 aa25.07■■□□□ 1.6
PCOLCE-208ENST00000487172 RTCBQ9Y3I0 505 aaKnown RBP25.07■■□□□ 1.6
PCOLCE-208ENST00000487172 GNPATO15228 680 aa25.06■■□□□ 1.6
PCOLCE-208ENST00000487172 A1BGP04217 495 aa25.06■■□□□ 1.6
PCOLCE-208ENST00000487172 SSFA2P28290 1259 aa25.06■■□□□ 1.6
PCOLCE-208ENST00000487172 CHMP4AQ9BY43 222 aa25.06■■□□□ 1.6
PCOLCE-208ENST00000487172 ZBTB1Q9Y2K1 713 aa25.06■■□□□ 1.6
PCOLCE-208ENST00000487172 ERBB4Q15303 1308 aa25.06■■□□□ 1.6
PCOLCE-208ENST00000487172 EXOSC9Q06265 439 aaKnown RBP25.05■■□□□ 1.6
PCOLCE-208ENST00000487172 TUBGCP6Q96RT7 1819 aa25.05■■□□□ 1.6
PCOLCE-208ENST00000487172 ADRA2BP18089 450 aa25.04■■□□□ 1.6
PCOLCE-208ENST00000487172 IL6STP40189 918 aaPredicted RBP25.04■■□□□ 1.6
PCOLCE-208ENST00000487172 TWISTNBQ3B726 338 aaPredicted RBP25.04■■□□□ 1.6
PCOLCE-208ENST00000487172 TSPYL6Q8N831 410 aa25.04■■□□□ 1.6
PCOLCE-208ENST00000487172 PNPLA7Q6ZV29 1317 aa25.04■■□□□ 1.6
PCOLCE-208ENST00000487172 ELL2O00472 640 aaPredicted RBP25.03■■□□□ 1.6
PCOLCE-208ENST00000487172 EIF2S2P20042 333 aaKnown RBP25.03■■□□□ 1.6
PCOLCE-208ENST00000487172 R3HDM1Q15032 1099 aaKnown RBP25.03■■□□□ 1.6
PCOLCE-208ENST00000487172 CANXP27824 592 aaKnown RBP25.02■■□□□ 1.6
PCOLCE-208ENST00000487172 EIF5P55010 431 aaKnown RBP25.02■■□□□ 1.6
PCOLCE-208ENST00000487172 TRAPPC3LQ5T215 181 aa25.02■■□□□ 1.6
PCOLCE-208ENST00000487172 HDGFL1Q5TGJ6 251 aa25.02■■□□□ 1.6
PCOLCE-208ENST00000487172 AMIGO3Q86WK7 504 aa25.02■■□□□ 1.6
PCOLCE-208ENST00000487172 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.01■■□□□ 1.59
PCOLCE-208ENST00000487172 NBPF26B4DH59 902 aa25.01■■□□□ 1.59
PCOLCE-208ENST00000487172 VAMP4O75379 141 aa25.01■■□□□ 1.59
PCOLCE-208ENST00000487172 NBPF10Q6P3W6 841 aaKnown RBP25.01■■□□□ 1.59
PCOLCE-208ENST00000487172 NBPF15Q8N660 670 aa25.01■■□□□ 1.59
PCOLCE-208ENST00000487172 PDIA6Q15084 440 aa24.99■■□□□ 1.59
PCOLCE-208ENST00000487172 COL23A1Q86Y22 540 aaPredicted RBP24.99■■□□□ 1.59
PCOLCE-208ENST00000487172 CCDC30Q5VVM6 783 aa24.98■■□□□ 1.59
PCOLCE-208ENST00000487172 ARHGEF1Q92888 912 aaKnown RBP24.98■■□□□ 1.59
PCOLCE-208ENST00000487172 DDX21Q9NR30 783 aaKnown RBP eCLIP24.98■■□□□ 1.59
PCOLCE-208ENST00000487172 A0A087WZG4 1122 aa24.97■■□□□ 1.59
PCOLCE-208ENST00000487172 PSDA5PKW4 1024 aaPredicted RBP24.97■■□□□ 1.59
PCOLCE-208ENST00000487172 PHF14O94880 888 aa24.97■■□□□ 1.59
PCOLCE-208ENST00000487172 SMIM5Q71RC9 77 aa24.97■■□□□ 1.59
PCOLCE-208ENST00000487172 SLC16A10Q8TF71 515 aa24.97■■□□□ 1.59
PCOLCE-208ENST00000487172 DBF4Q9UBU7 674 aaPredicted RBP24.97■■□□□ 1.59
PCOLCE-208ENST00000487172 COL15A1P39059 1388 aa24.96■■□□□ 1.59
PCOLCE-208ENST00000487172 CASZ1Q86V15 1759 aa24.96■■□□□ 1.59
PCOLCE-208ENST00000487172 CT47B1P0C2W7 299 aaPredicted RBP24.96■■□□□ 1.59
PCOLCE-208ENST00000487172 PIP4K2AP48426 406 aaPredicted RBP24.96■■□□□ 1.59
PCOLCE-208ENST00000487172 LRP10Q7Z4F1 713 aa24.96■■□□□ 1.59
PCOLCE-208ENST00000487172 NECTIN2Q92692 538 aa24.96■■□□□ 1.59
PCOLCE-208ENST00000487172 NPM2Q86SE8 214 aaKnown RBP24.95■■□□□ 1.58
PCOLCE-208ENST00000487172 ZNF428Q96B54 188 aa24.95■■□□□ 1.58
PCOLCE-208ENST00000487172 CHPF2Q9P2E5 772 aa24.95■■□□□ 1.58
PCOLCE-208ENST00000487172 RFC4P35249 363 aa24.94■■□□□ 1.58
PCOLCE-208ENST00000487172 C4AP0C0L4 1744 aa24.93■■□□□ 1.58
PCOLCE-208ENST00000487172 MYL6BP14649 208 aa24.93■■□□□ 1.58
PCOLCE-208ENST00000487172 PDGFDQ9GZP0 370 aaPredicted RBP24.93■■□□□ 1.58
PCOLCE-208ENST00000487172 HYPKQ9NX55 129 aa24.93■■□□□ 1.58
PCOLCE-208ENST00000487172 NARFQ9UHQ1 456 aa24.93■■□□□ 1.58
PCOLCE-208ENST00000487172 PROSER3Q2NL68 480 aa24.92■■□□□ 1.58
PCOLCE-208ENST00000487172 YTHDC1Q96MU7 727 aaKnown RBP24.92■■□□□ 1.58
PCOLCE-208ENST00000487172 MSH5O43196 834 aa24.91■■□□□ 1.58
PCOLCE-208ENST00000487172 STK31Q9BXU1 1019 aa24.91■■□□□ 1.58
PCOLCE-208ENST00000487172 ZNF330Q9Y3S2 320 aaPredicted RBP24.91■■□□□ 1.58
PCOLCE-208ENST00000487172 CACNA1FO60840 1977 aa24.91■■□□□ 1.58
PCOLCE-208ENST00000487172 USP42Q9H9J4 1324 aaKnown RBP24.9■■□□□ 1.58
PCOLCE-208ENST00000487172 ANXA1P04083 346 aa24.9■■□□□ 1.58
PCOLCE-208ENST00000487172 RGL2O15211 777 aa24.89■■□□□ 1.58
PCOLCE-208ENST00000487172 ZPR1O75312 459 aa24.89■■□□□ 1.58
PCOLCE-208ENST00000487172 DZIP3Q86Y13 1208 aaKnown RBP24.89■■□□□ 1.58
PCOLCE-208ENST00000487172 TBC1D2BQ9UPU7 963 aa24.89■■□□□ 1.58
PCOLCE-208ENST00000487172 MTFR1LQ9H019 292 aa24.88■■□□□ 1.57
PCOLCE-208ENST00000487172 SLC4A2P04920 1241 aa24.87■■□□□ 1.57
PCOLCE-208ENST00000487172 GYS1P13807 737 aa24.87■■□□□ 1.57
PCOLCE-208ENST00000487172 COPS6Q7L5N1 327 aa24.87■■□□□ 1.57
PCOLCE-208ENST00000487172 SRP68Q9UHB9 627 aaKnown RBP24.87■■□□□ 1.57
PCOLCE-208ENST00000487172 ERVV-1B6SEH8 477 aa24.86■■□□□ 1.57
PCOLCE-208ENST00000487172 CAMTA2O94983 1202 aa24.86■■□□□ 1.57
PCOLCE-208ENST00000487172 ALDH1L2Q3SY69 923 aa24.86■■□□□ 1.57
PCOLCE-208ENST00000487172 USPL1Q5W0Q7 1092 aa24.86■■□□□ 1.57
PCOLCE-208ENST00000487172 TTLL7Q6ZT98 887 aa24.86■■□□□ 1.57
PCOLCE-208ENST00000487172 NLGN1Q8N2Q7 840 aa24.86■■□□□ 1.57
PCOLCE-208ENST00000487172 XAGE3Q8WTP9 111 aa24.86■■□□□ 1.57
PCOLCE-208ENST00000487172 TCERG1O14776 1098 aaKnown RBP24.85■■□□□ 1.57
PCOLCE-208ENST00000487172 KIF6Q6ZMV9 814 aa24.85■■□□□ 1.57
PCOLCE-208ENST00000487172 ARXQ96QS3 562 aa24.85■■□□□ 1.57
PCOLCE-208ENST00000487172 BCL2L12Q9HB09 334 aa24.85■■□□□ 1.57
PCOLCE-208ENST00000487172 COL24A1Q17RW2 1714 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms