RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 SLC26A8Q96RN1 970 aa10.12□□□□□ -0.79
TMEM39A-209ENST00000486235 ARHGAP31Q2M1Z3 1444 aa10.12□□□□□ -0.79
TMEM39A-209ENST00000486235 MYOM3Q5VTT5 1437 aa10.12□□□□□ -0.79
TMEM39A-209ENST00000486235 VPS8Q8N3P4 1428 aa10.12□□□□□ -0.79
TMEM39A-209ENST00000486235 PRDM15P57071 1507 aaPredicted RBP10.12□□□□□ -0.79
TMEM39A-209ENST00000486235 MAN1A2O60476 641 aa10.11□□□□□ -0.79
TMEM39A-209ENST00000486235 KCNA6P17658 529 aa10.11□□□□□ -0.79
TMEM39A-209ENST00000486235 NR5A1Q13285 461 aa10.11□□□□□ -0.79
TMEM39A-209ENST00000486235 ABCC5O15440 1437 aa10.1□□□□□ -0.79
TMEM39A-209ENST00000486235 BMP2P12643 396 aa10.1□□□□□ -0.79
TMEM39A-209ENST00000486235 PDE4DQ08499 809 aa10.1□□□□□ -0.79
TMEM39A-209ENST00000486235 IDI1Q13907 227 aa10.1□□□□□ -0.79
TMEM39A-209ENST00000486235 RTL5Q5HYW3 569 aaPredicted RBP10.1□□□□□ -0.79
TMEM39A-209ENST00000486235 KANK1Q14678 1352 aa10.1□□□□□ -0.79
TMEM39A-209ENST00000486235 ROBO1Q9Y6N7 1651 aa10.09□□□□□ -0.79
TMEM39A-209ENST00000486235 ERBINQ96RT1 1412 aa10.09□□□□□ -0.79
TMEM39A-209ENST00000486235 MAP3K1Q13233 1512 aa10.09□□□□□ -0.79
TMEM39A-209ENST00000486235 EFCAB6Q5THR3 1501 aa10.09□□□□□ -0.79
TMEM39A-209ENST00000486235 MAGEB6P1A0A0J9YX57 407 aa10.08□□□□□ -0.8
TMEM39A-209ENST00000486235 LOC105371045A0A1W2PR82 267 aa10.08□□□□□ -0.8
TMEM39A-209ENST00000486235 LILRB3O75022 631 aa10.08□□□□□ -0.8
TMEM39A-209ENST00000486235 CHIC2Q9UKJ5 165 aa10.08□□□□□ -0.8
TMEM39A-209ENST00000486235 MSH6P52701 1360 aa10.07□□□□□ -0.8
TMEM39A-209ENST00000486235 UPP2O95045 317 aa10.07□□□□□ -0.8
TMEM39A-209ENST00000486235 FSHRP23945 695 aa10.07□□□□□ -0.8
TMEM39A-209ENST00000486235 CARD14Q9BXL6 1004 aa10.07□□□□□ -0.8
TMEM39A-209ENST00000486235 SETD1AO15047 1707 aaKnown RBP10.07□□□□□ -0.8
TMEM39A-209ENST00000486235 VASH1Q7L8A9 365 aaPredicted RBP10.06□□□□□ -0.8
TMEM39A-209ENST00000486235 ARMC2Q8NEN0 867 aa10.06□□□□□ -0.8
TMEM39A-209ENST00000486235 SLC24A3Q9HC58 644 aa10.06□□□□□ -0.8
TMEM39A-209ENST00000486235 POLR3EQ9NVU0 708 aa10.06□□□□□ -0.8
TMEM39A-209ENST00000486235 DAPK1P53355 1430 aa10.06□□□□□ -0.8
TMEM39A-209ENST00000486235 TET3O43151 1660 aa10.06□□□□□ -0.8
TMEM39A-209ENST00000486235 NKTRP30414 1462 aaKnown RBP10.05□□□□□ -0.8
TMEM39A-209ENST00000486235 LINC00528Q8N1L1 170 aa10.05□□□□□ -0.8
TMEM39A-209ENST00000486235 SLAIN2Q9P270 581 aa10.05□□□□□ -0.8
TMEM39A-209ENST00000486235 ADGRB3O60242 1522 aa10.05□□□□□ -0.8
TMEM39A-209ENST00000486235 CROCC2H7BZ55 1655 aa10.05□□□□□ -0.8
TMEM39A-209ENST00000486235 PTPN23Q9H3S7 1636 aa10.04□□□□□ -0.8
TMEM39A-209ENST00000486235 JCADQ9P266 1359 aa10.04□□□□□ -0.8
TMEM39A-209ENST00000486235 LMTK2Q8IWU2 1503 aa10.04□□□□□ -0.8
TMEM39A-209ENST00000486235 MEIOBQ8N635 442 aa10.04□□□□□ -0.8
TMEM39A-209ENST00000486235 HELBQ8NG08 1087 aaPredicted RBP10.04□□□□□ -0.8
TMEM39A-209ENST00000486235 C1QTNF2Q9BXJ5 285 aa10.04□□□□□ -0.8
TMEM39A-209ENST00000486235 NOS1P29475 1434 aa10.04□□□□□ -0.8
TMEM39A-209ENST00000486235 NWD1Q149M9 1564 aa10.04□□□□□ -0.8
TMEM39A-209ENST00000486235 ANKRD30AQ9BXX3 1397 aa10.03□□□□□ -0.8
TMEM39A-209ENST00000486235 PHLPP1O60346 1717 aa10.03□□□□□ -0.8
TMEM39A-209ENST00000486235 PPFIA3O75145 1194 aa10.03□□□□□ -0.8
TMEM39A-209ENST00000486235 PPP1R15AO75807 674 aaPredicted RBP10.03□□□□□ -0.8
TMEM39A-209ENST00000486235 NBPF14Q5TI25 921 aa10.03□□□□□ -0.8
TMEM39A-209ENST00000486235 SH3BP5LQ7L8J4 393 aa10.03□□□□□ -0.8
TMEM39A-209ENST00000486235 SH3RF1Q7Z6J0 888 aa10.03□□□□□ -0.8
TMEM39A-209ENST00000486235 KDM5AP29375 1690 aaKnown RBP10.02□□□□□ -0.8
TMEM39A-209ENST00000486235 CLK2P49760 499 aaKnown RBP10.02□□□□□ -0.81
TMEM39A-209ENST00000486235 TUSC1Q2TAM9 212 aa10.02□□□□□ -0.81
TMEM39A-209ENST00000486235 MEX3CQ5U5Q3 659 aaKnown RBP10.02□□□□□ -0.81
TMEM39A-209ENST00000486235 C14orf37Q86TY3 774 aa10.02□□□□□ -0.81
TMEM39A-209ENST00000486235 TRIM52Q96A61 297 aa10.02□□□□□ -0.81
TMEM39A-209ENST00000486235 SLC52A1Q9NWF4 448 aa10.02□□□□□ -0.81
TMEM39A-209ENST00000486235 DNMT3LQ9UJW3 386 aa10.02□□□□□ -0.81
TMEM39A-209ENST00000486235 FGD6Q6ZV73 1430 aa10.01□□□□□ -0.81
TMEM39A-209ENST00000486235 LRP6O75581 1613 aa10.01□□□□□ -0.81
TMEM39A-209ENST00000486235 VSIG8P0DPA2 414 aa10.01□□□□□ -0.81
TMEM39A-209ENST00000486235 CTDSPL2Q05D32 466 aa10.01□□□□□ -0.81
TMEM39A-209ENST00000486235 PLEKHG1Q9ULL1 1385 aa10.01□□□□□ -0.81
TMEM39A-209ENST00000486235 ZFYVE9O95405 1425 aa10□□□□□ -0.81
TMEM39A-209ENST00000486235 RIMS2Q9UQ26 1411 aa10□□□□□ -0.81
TMEM39A-209ENST00000486235 SOS2Q07890 1332 aaPredicted RBP10□□□□□ -0.81
TMEM39A-209ENST00000486235 COL16A1Q07092 1604 aaPredicted RBP10□□□□□ -0.81
TMEM39A-209ENST00000486235 FIGNL2A6NMB9 653 aa9.99□□□□□ -0.81
TMEM39A-209ENST00000486235 CCDC116Q8IYX3 515 aa9.99□□□□□ -0.81
TMEM39A-209ENST00000486235 MAP4K5Q9Y4K4 846 aa9.99□□□□□ -0.81
TMEM39A-209ENST00000486235 CBLBQ13191 982 aa9.98□□□□□ -0.81
TMEM39A-209ENST00000486235 ERFEQ4G0M1 354 aa9.98□□□□□ -0.81
TMEM39A-209ENST00000486235 ZNF772Q68DY9 489 aaPredicted RBP9.98□□□□□ -0.81
TMEM39A-209ENST00000486235 TRMT44Q8IYL2 757 aaKnown RBP9.98□□□□□ -0.81
TMEM39A-209ENST00000486235 TSEN34Q9BSV6 310 aaKnown RBP9.98□□□□□ -0.81
TMEM39A-209ENST00000486235 EMILIN1Q9Y6C2 1016 aa9.98□□□□□ -0.81
TMEM39A-209ENST00000486235 SPATA31A6Q5VVP1 1343 aa9.98□□□□□ -0.81
TMEM39A-209ENST00000486235 ATF3P18847 181 aa9.97□□□□□ -0.81
TMEM39A-209ENST00000486235 FAM50AQ14320 339 aaKnown RBP9.97□□□□□ -0.81
TMEM39A-209ENST00000486235 LRRN4Q8WUT4 740 aa9.97□□□□□ -0.81
TMEM39A-209ENST00000486235 TBX22Q9Y458 520 aa9.97□□□□□ -0.81
TMEM39A-209ENST00000486235 CHD2O14647 1828 aaKnown RBP9.97□□□□□ -0.81
TMEM39A-209ENST00000486235 GCC2Q8IWJ2 1684 aa9.96□□□□□ -0.81
TMEM39A-209ENST00000486235 MYO5BQ9ULV0 1848 aa9.96□□□□□ -0.81
TMEM39A-209ENST00000486235 PPP1R26Q5T8A7 1209 aaPredicted RBP9.96□□□□□ -0.82
TMEM39A-209ENST00000486235 RSPH6AQ9H0K4 717 aa9.96□□□□□ -0.82
TMEM39A-209ENST00000486235 ADAMTS13Q76LX8 1427 aa9.96□□□□□ -0.82
TMEM39A-209ENST00000486235 ANKRD50Q9ULJ7 1429 aa9.96□□□□□ -0.82
TMEM39A-209ENST00000486235 RPRD2Q5VT52 1461 aaKnown RBP9.96□□□□□ -0.82
TMEM39A-209ENST00000486235 TTLL8A6PVC2 850 aa9.95□□□□□ -0.82
TMEM39A-209ENST00000486235 GPR161Q8N6U8 529 aaKnown RBP9.95□□□□□ -0.82
TMEM39A-209ENST00000486235 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.95□□□□□ -0.82
TMEM39A-209ENST00000486235 ARHGAP9Q9BRR9 750 aa9.95□□□□□ -0.82
TMEM39A-209ENST00000486235 C19orf44Q9H6X5 657 aa9.95□□□□□ -0.82
TMEM39A-209ENST00000486235 ADGRL2O95490 1459 aa9.95□□□□□ -0.82
TMEM39A-209ENST00000486235 TMEM131LA2VDJ0 1609 aa9.95□□□□□ -0.82
TMEM39A-209ENST00000486235 AHDC1Q5TGY3 1603 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms