RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 PSMA5P28066 241 aa13.5□□□□□ -0.25
SMPD4-218ENST00000482171 AKAP17AQ02040 695 aaKnown RBP13.5□□□□□ -0.25
SMPD4-218ENST00000482171 RRP12Q5JTH9 1297 aaKnown RBP13.5□□□□□ -0.25
SMPD4-218ENST00000482171 EXOC5O00471 708 aa13.5□□□□□ -0.25
SMPD4-218ENST00000482171 TET3O43151 1660 aa13.49□□□□□ -0.25
SMPD4-218ENST00000482171 ANKRD13DQ6ZTN6 518 aa13.49□□□□□ -0.25
SMPD4-218ENST00000482171 CREBRFQ8IUR6 639 aa13.49□□□□□ -0.25
SMPD4-218ENST00000482171 TBC1D2BQ9UPU7 963 aa13.49□□□□□ -0.25
SMPD4-218ENST00000482171 CYP46A1Q9Y6A2 500 aa13.49□□□□□ -0.25
SMPD4-218ENST00000482171 CLASP1Q7Z460 1538 aa13.49□□□□□ -0.25
SMPD4-218ENST00000482171 SNRPA1P09661 255 aaKnown RBP13.49□□□□□ -0.25
SMPD4-218ENST00000482171 ZCRB1Q8TBF4 217 aaKnown RBP13.49□□□□□ -0.25
SMPD4-218ENST00000482171 TNPO1Q92973 898 aaKnown RBP13.49□□□□□ -0.25
SMPD4-218ENST00000482171 PA2G4Q9UQ80 394 aaKnown RBP13.49□□□□□ -0.25
SMPD4-218ENST00000482171 MAP3K5Q99683 1374 aa13.49□□□□□ -0.25
SMPD4-218ENST00000482171 HIP1O00291 1037 aa13.49□□□□□ -0.25
SMPD4-218ENST00000482171 ZBTB7BO15156 539 aaPredicted RBP13.49□□□□□ -0.25
SMPD4-218ENST00000482171 NGLY1Q96IV0 654 aa13.49□□□□□ -0.25
SMPD4-218ENST00000482171 PRDM10Q9NQV6 1147 aa13.49□□□□□ -0.25
SMPD4-218ENST00000482171 SDSP20132 328 aa13.48□□□□□ -0.25
SMPD4-218ENST00000482171 CIZ1Q9ULV3 898 aaPredicted RBP13.48□□□□□ -0.25
SMPD4-218ENST00000482171 SBNO1A3KN83 1393 aa13.48□□□□□ -0.25
SMPD4-218ENST00000482171 CHL1O00533 1208 aa13.48□□□□□ -0.25
SMPD4-218ENST00000482171 RAB11FIP3O75154 756 aa13.48□□□□□ -0.25
SMPD4-218ENST00000482171 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.48□□□□□ -0.25
SMPD4-218ENST00000482171 TTC22Q5TAA0 569 aa13.48□□□□□ -0.25
SMPD4-218ENST00000482171 PRPF40BQ6NWY9 871 aaKnown RBP13.48□□□□□ -0.25
SMPD4-218ENST00000482171 CROCC2H7BZ55 1655 aa13.48□□□□□ -0.25
SMPD4-218ENST00000482171 CEP85Q6P2H3 762 aa13.47□□□□□ -0.25
SMPD4-218ENST00000482171 PDCL3Q9H2J4 239 aa13.47□□□□□ -0.25
SMPD4-218ENST00000482171 CEBPZQ03701 1054 aaKnown RBP13.47□□□□□ -0.25
SMPD4-218ENST00000482171 RHPN1Q8TCX5 695 aa13.47□□□□□ -0.25
SMPD4-218ENST00000482171 IDH1O75874 414 aaKnown RBP13.47□□□□□ -0.25
SMPD4-218ENST00000482171 METTL24Q5JXM2 366 aa13.47□□□□□ -0.25
SMPD4-218ENST00000482171 SMC5Q8IY18 1101 aa13.47□□□□□ -0.25
SMPD4-218ENST00000482171 CASTP20810 708 aaKnown RBP13.47□□□□□ -0.25
SMPD4-218ENST00000482171 MCM2P49736 904 aa13.47□□□□□ -0.25
SMPD4-218ENST00000482171 OTUD7AQ8TE49 926 aaPredicted RBP13.47□□□□□ -0.25
SMPD4-218ENST00000482171 NOL10Q9BSC4 688 aaKnown RBP13.47□□□□□ -0.25
SMPD4-218ENST00000482171 MBD3O95983 291 aa13.46□□□□□ -0.25
SMPD4-218ENST00000482171 BLOC1S2Q6QNY1 142 aa13.46□□□□□ -0.25
SMPD4-218ENST00000482171 ACSBG1Q96GR2 724 aa13.46□□□□□ -0.25
SMPD4-218ENST00000482171 SNRKQ9NRH2 765 aa13.46□□□□□ -0.25
SMPD4-218ENST00000482171 TRMT112Q9UI30 125 aaKnown RBP13.46□□□□□ -0.25
SMPD4-218ENST00000482171 UNC13BO14795 1591 aa13.46□□□□□ -0.26
SMPD4-218ENST00000482171 RNMTO43148 476 aaKnown RBP13.46□□□□□ -0.26
SMPD4-218ENST00000482171 SSFA2P28290 1259 aa13.46□□□□□ -0.26
SMPD4-218ENST00000482171 TRIM29Q14134 588 aa13.46□□□□□ -0.26
SMPD4-218ENST00000482171 PLEKHF1Q96S99 279 aa13.46□□□□□ -0.26
SMPD4-218ENST00000482171 GOLGA6L19H0YKK7 550 aa13.45□□□□□ -0.26
SMPD4-218ENST00000482171 ATP2B1P20020 1258 aa13.45□□□□□ -0.26
SMPD4-218ENST00000482171 PDE1AP54750 535 aa13.45□□□□□ -0.26
SMPD4-218ENST00000482171 ARAP3Q8WWN8 1544 aa13.45□□□□□ -0.26
SMPD4-218ENST00000482171 TSPY26PQ9H489 355 aa13.45□□□□□ -0.26
SMPD4-218ENST00000482171 CHMP4CQ96CF2 233 aa13.45□□□□□ -0.26
SMPD4-218ENST00000482171 SHROOM2Q13796 1616 aa13.45□□□□□ -0.26
SMPD4-218ENST00000482171 TRPM1Q7Z4N2 1603 aa13.45□□□□□ -0.26
SMPD4-218ENST00000482171 ERICH2A1L162 156 aa13.44□□□□□ -0.26
SMPD4-218ENST00000482171 BECN2A8MW95 431 aa13.44□□□□□ -0.26
SMPD4-218ENST00000482171 ECHDC1Q9NTX5 307 aa13.44□□□□□ -0.26
SMPD4-218ENST00000482171 ZNF521Q96K83 1311 aa13.44□□□□□ -0.26
SMPD4-218ENST00000482171 KSR2Q6VAB6 950 aa13.44□□□□□ -0.26
SMPD4-218ENST00000482171 DCTPP1Q9H773 170 aa13.44□□□□□ -0.26
SMPD4-218ENST00000482171 SYCE3A1L190 88 aa13.44□□□□□ -0.26
SMPD4-218ENST00000482171 KCNQ3O43525 872 aa13.44□□□□□ -0.26
SMPD4-218ENST00000482171 DHX16O60231 1041 aaKnown RBP13.44□□□□□ -0.26
SMPD4-218ENST00000482171 PDRG1Q9NUG6 133 aa13.44□□□□□ -0.26
SMPD4-218ENST00000482171 RNF17Q9BXT8 1623 aaKnown RBP13.44□□□□□ -0.26
SMPD4-218ENST00000482171 GRM8O00222 908 aa13.44□□□□□ -0.26
SMPD4-218ENST00000482171 HMGN5P82970 282 aaKnown RBP13.44□□□□□ -0.26
SMPD4-218ENST00000482171 ATP8B2P98198 1209 aa13.44□□□□□ -0.26
SMPD4-218ENST00000482171 SIRT1Q96EB6 747 aa13.44□□□□□ -0.26
SMPD4-218ENST00000482171 FERMT3Q86UX7 667 aa13.43□□□□□ -0.26
SMPD4-218ENST00000482171 TRMT2AQ8IZ69 625 aaKnown RBP13.43□□□□□ -0.26
SMPD4-218ENST00000482171 ABCF2Q9UG63 623 aa13.43□□□□□ -0.26
SMPD4-218ENST00000482171 SYNMO15061 1565 aa13.43□□□□□ -0.26
SMPD4-218ENST00000482171 IFIT1P09914 478 aaKnown RBP13.43□□□□□ -0.26
SMPD4-218ENST00000482171 IFIT5Q13325 482 aaKnown RBP13.43□□□□□ -0.26
SMPD4-218ENST00000482171 KLHL34Q8N239 644 aa13.43□□□□□ -0.26
SMPD4-218ENST00000482171 IL17REQ8NFR9 667 aa13.43□□□□□ -0.26
SMPD4-218ENST00000482171 SPC24Q8NBT2 197 aa13.43□□□□□ -0.26
SMPD4-218ENST00000482171 MAP3K4Q9Y6R4 1608 aa13.42□□□□□ -0.26
SMPD4-218ENST00000482171 LMBR1LQ6UX01 489 aa13.42□□□□□ -0.26
SMPD4-218ENST00000482171 CCDC83Q8IWF9 413 aa13.42□□□□□ -0.26
SMPD4-218ENST00000482171 DDX11Q96FC9 970 aa13.42□□□□□ -0.26
SMPD4-218ENST00000482171 E9PCH4 1651 aa13.42□□□□□ -0.26
SMPD4-218ENST00000482171 CWC25Q9NXE8 425 aaPredicted RBP13.42□□□□□ -0.26
SMPD4-218ENST00000482171 LARP1BQ659C4 914 aaKnown RBP13.42□□□□□ -0.26
SMPD4-218ENST00000482171 ABCA9Q8IUA7 1624 aa13.41□□□□□ -0.26
SMPD4-218ENST00000482171 IL2RBP14784 551 aa13.41□□□□□ -0.26
SMPD4-218ENST00000482171 AMOTL1Q8IY63 956 aa13.41□□□□□ -0.26
SMPD4-218ENST00000482171 PLEKHG1Q9ULL1 1385 aa13.41□□□□□ -0.26
SMPD4-218ENST00000482171 SPHKAPQ2M3C7 1700 aa13.41□□□□□ -0.26
SMPD4-218ENST00000482171 PPFIA3O75145 1194 aa13.41□□□□□ -0.26
SMPD4-218ENST00000482171 PLEKHM2Q8IWE5 1019 aa13.41□□□□□ -0.26
SMPD4-218ENST00000482171 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.41□□□□□ -0.262e-7■■■■□ 20.2
SMPD4-218ENST00000482171 USP19O94966 1318 aa13.41□□□□□ -0.26
SMPD4-218ENST00000482171 GOLIM4O00461 696 aa13.41□□□□□ -0.26
SMPD4-218ENST00000482171 NCBP3Q53F19 620 aaKnown RBP13.41□□□□□ -0.26
SMPD4-218ENST00000482171 CWC22Q9HCG8 908 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms