RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 CHL1O00533 1208 aa12.55□□□□□ -0.4
CD46-214ENST00000480003 IER5LQ5T953 404 aa12.55□□□□□ -0.4
CD46-214ENST00000480003 ZNF467Q7Z7K2 595 aaPredicted RBP12.55□□□□□ -0.4
CD46-214ENST00000480003 COLQQ9Y215 455 aaPredicted RBP12.55□□□□□ -0.4
CD46-214ENST00000480003 IL16Q14005 1332 aa12.55□□□□□ -0.4
CD46-214ENST00000480003 TEFQ10587 303 aa12.54□□□□□ -0.4
CD46-214ENST00000480003 TRMT2AQ8IZ69 625 aaKnown RBP12.54□□□□□ -0.4
CD46-214ENST00000480003 CFAP44Q96MT7 982 aa12.54□□□□□ -0.4
CD46-214ENST00000480003 ADAMTS7Q9UKP4 1686 aa12.54□□□□□ -0.4
CD46-214ENST00000480003 TRIM37O94972 964 aa12.53□□□□□ -0.4
CD46-214ENST00000480003 CALD1Q05682 793 aaKnown RBP12.53□□□□□ -0.4
CD46-214ENST00000480003 TMOD3Q9NYL9 352 aa12.53□□□□□ -0.4
CD46-214ENST00000480003 MIS18AQ9NYP9 233 aa12.53□□□□□ -0.4
CD46-214ENST00000480003 DLG5Q8TDM6 1919 aa12.52□□□□□ -0.4
CD46-214ENST00000480003 BTBD11A6QL63 1104 aa12.52□□□□□ -0.41
CD46-214ENST00000480003 KCNQ3O43525 872 aa12.52□□□□□ -0.41
CD46-214ENST00000480003 GNAI1P63096 354 aa12.52□□□□□ -0.41
CD46-214ENST00000480003 GOLGA2Q08379 1002 aa12.52□□□□□ -0.41
CD46-214ENST00000480003 ATG3Q9NT62 314 aa12.52□□□□□ -0.41
CD46-214ENST00000480003 IFT57Q9NWB7 429 aa12.52□□□□□ -0.41
CD46-214ENST00000480003 ASAP1Q9ULH1 1129 aa12.52□□□□□ -0.41
CD46-214ENST00000480003 ZBED9Q6R2W3 1325 aa12.52□□□□□ -0.41
CD46-214ENST00000480003 KAT6BQ8WYB5 2073 aa12.52□□□□□ -0.41
CD46-214ENST00000480003 SEC24BO95487 1268 aa12.51□□□□□ -0.41
CD46-214ENST00000480003 SLFN5Q08AF3 891 aa12.51□□□□□ -0.41
CD46-214ENST00000480003 SLC39A6Q13433 755 aa12.51□□□□□ -0.41
CD46-214ENST00000480003 SYTL4Q96C24 671 aaPredicted RBP12.51□□□□□ -0.41
CD46-214ENST00000480003 PLSCR1O15162 318 aa12.5□□□□□ -0.41
CD46-214ENST00000480003 ZNF790Q6PG37 636 aa12.5□□□□□ -0.41
CD46-214ENST00000480003 CDCA7LQ96GN5 454 aa12.5□□□□□ -0.41
CD46-214ENST00000480003 MBIPQ9NS73 344 aa12.5□□□□□ -0.41
CD46-214ENST00000480003 MRC1P22897 1456 aa12.5□□□□□ -0.41
CD46-214ENST00000480003 SCN11AQ9UI33 1791 aa12.5□□□□□ -0.41
CD46-214ENST00000480003 E9PSI1 815 aa12.49□□□□□ -0.41
CD46-214ENST00000480003 EIF4A1P60842 406 aaKnown RBP12.49□□□□□ -0.41
CD46-214ENST00000480003 SMARCC1Q92922 1105 aaPredicted RBP12.49□□□□□ -0.41
CD46-214ENST00000480003 LAS1LQ9Y4W2 734 aaKnown RBP12.49□□□□□ -0.41
CD46-214ENST00000480003 HEG1Q9ULI3 1381 aa12.48□□□□□ -0.41
CD46-214ENST00000480003 SLC4A9Q96Q91 983 aa12.48□□□□□ -0.41
CD46-214ENST00000480003 TSPYL4Q9UJ04 414 aa12.48□□□□□ -0.41
CD46-214ENST00000480003 TOGARAM1Q9Y4F4 1720 aa12.48□□□□□ -0.41
CD46-214ENST00000480003 SBF2Q86WG5 1849 aa12.47□□□□□ -0.41
CD46-214ENST00000480003 APBA3O96018 575 aa12.47□□□□□ -0.41
CD46-214ENST00000480003 DUSP27Q5VZP5 1158 aa12.47□□□□□ -0.41
CD46-214ENST00000480003 ZNF496Q96IT1 587 aaPredicted RBP12.47□□□□□ -0.41
CD46-214ENST00000480003 SRCAPQ6ZRS2 3230 aa12.47□□□□□ -0.41
CD46-214ENST00000480003 SF3B2Q13435 895 aaKnown RBP12.46□□□□□ -0.41
CD46-214ENST00000480003 VSIG10Q8N0Z9 540 aa12.46□□□□□ -0.41
CD46-214ENST00000480003 CAMKK2Q96RR4 588 aa12.46□□□□□ -0.41
CD46-214ENST00000480003 ITGB4P16144 1822 aa12.46□□□□□ -0.42
CD46-214ENST00000480003 LOC102724428A0A0B4J2F2 783 aa12.45□□□□□ -0.42
CD46-214ENST00000480003 PTCD1O75127 700 aaKnown RBP12.45□□□□□ -0.42
CD46-214ENST00000480003 GIGYF1O75420 1035 aaPredicted RBP12.45□□□□□ -0.42
CD46-214ENST00000480003 SIK1P57059 783 aa12.45□□□□□ -0.42
CD46-214ENST00000480003 MAMSTRQ6ZN01 415 aa12.45□□□□□ -0.42
CD46-214ENST00000480003 TTC5Q8N0Z6 440 aa12.45□□□□□ -0.42
CD46-214ENST00000480003 TSR2Q969E8 191 aaKnown RBP12.45□□□□□ -0.42
CD46-214ENST00000480003 YTHDC1Q96MU7 727 aaKnown RBP12.45□□□□□ -0.42
CD46-214ENST00000480003 FMNL2Q96PY5 1086 aa12.45□□□□□ -0.42
CD46-214ENST00000480003 MYH16Q9H6N6 1097 aa12.45□□□□□ -0.42
CD46-214ENST00000480003 FANCIQ9NVI1 1328 aa12.44□□□□□ -0.42
CD46-214ENST00000480003 SIPA1L3O60292 1781 aaPredicted RBP12.44□□□□□ -0.42
CD46-214ENST00000480003 PSEN1P49768 467 aa12.44□□□□□ -0.42
CD46-214ENST00000480003 IRX5P78411 483 aaPredicted RBP12.44□□□□□ -0.42
CD46-214ENST00000480003 KRT24Q2M2I5 525 aa12.44□□□□□ -0.42
CD46-214ENST00000480003 TSPYL6Q8N831 410 aa12.44□□□□□ -0.42
CD46-214ENST00000480003 C8orf58Q8NAV2 365 aa12.44□□□□□ -0.42
CD46-214ENST00000480003 PALLDQ8WX93 1383 aa12.43□□□□□ -0.42
CD46-214ENST00000480003 NHSQ6T4R5 1651 aa12.43□□□□□ -0.42
CD46-214ENST00000480003 VAMP4O75379 141 aa12.43□□□□□ -0.42
CD46-214ENST00000480003 SNRPA1P09661 255 aaKnown RBP12.43□□□□□ -0.42
CD46-214ENST00000480003 EXOSC9Q06265 439 aaKnown RBP12.43□□□□□ -0.42
CD46-214ENST00000480003 TXNRD1Q16881 649 aa12.43□□□□□ -0.42
CD46-214ENST00000480003 TEX13AQ9BXU3 409 aaPredicted RBP12.43□□□□□ -0.42
CD46-214ENST00000480003 LRRC4BQ9NT99 713 aa12.43□□□□□ -0.42
CD46-214ENST00000480003 USP16Q9Y5T5 823 aa12.43□□□□□ -0.42
CD46-214ENST00000480003 VIRMAQ69YN4 1812 aaKnown RBP12.43□□□□□ -0.42
CD46-214ENST00000480003 DOT1LQ8TEK3 1739 aa12.42□□□□□ -0.42
CD46-214ENST00000480003 PRAMEF22A3QJZ6 481 aa12.42□□□□□ -0.42
CD46-214ENST00000480003 PLCG2P16885 1265 aa12.42□□□□□ -0.42
CD46-214ENST00000480003 ATP6V1AP38606 617 aa12.42□□□□□ -0.42
CD46-214ENST00000480003 EN1Q05925 392 aaPredicted RBP12.42□□□□□ -0.42
CD46-214ENST00000480003 SLC27A3Q5K4L6 730 aa12.42□□□□□ -0.42
CD46-214ENST00000480003 SCUBE2Q9NQ36 999 aa12.42□□□□□ -0.42
CD46-214ENST00000480003 ELL2O00472 640 aaPredicted RBP12.41□□□□□ -0.42
CD46-214ENST00000480003 HOXB7P09629 217 aa12.41□□□□□ -0.42
CD46-214ENST00000480003 BAG6P46379 1132 aa12.41□□□□□ -0.42
CD46-214ENST00000480003 PDAP1Q13442 181 aaKnown RBP12.41□□□□□ -0.42
CD46-214ENST00000480003 ITPK1Q13572 414 aa12.41□□□□□ -0.42
CD46-214ENST00000480003 EZH2Q15910 746 aaKnown RBP12.41□□□□□ -0.42
CD46-214ENST00000480003 DEFB132Q7Z7B7 95 aa12.41□□□□□ -0.42
CD46-214ENST00000480003 DNAJC10Q8IXB1 793 aa12.41□□□□□ -0.42
CD46-214ENST00000480003 KCPQ6ZWJ8 1503 aa12.41□□□□□ -0.42
CD46-214ENST00000480003 SOS1Q07889 1333 aaPredicted RBP12.4□□□□□ -0.42
CD46-214ENST00000480003 CYP19A1P11511 503 aaPredicted RBP12.4□□□□□ -0.42
CD46-214ENST00000480003 KCNQ4P56696 695 aa12.4□□□□□ -0.42
CD46-214ENST00000480003 TWISTNBQ3B726 338 aaPredicted RBP12.4□□□□□ -0.42
CD46-214ENST00000480003 RC3H1Q5TC82 1133 aaKnown RBP12.4□□□□□ -0.42
CD46-214ENST00000480003 CCNL1Q9UK58 526 aaPredicted RBP12.4□□□□□ -0.42
CD46-214ENST00000480003 BTAF1O14981 1849 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms