RNA–Protein interactions for RNA: ENST00000479239.1

LRRC47-203, Transcript of leucine rich repeat containing 47, humanhuman

TSL 3

Gene LRRC47, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-203ENST00000479239 BCL2L13Q9BXK5 485 aa7.86□□□□□ -1.15
LRRC47-203ENST00000479239 SMC4Q9NTJ3 1288 aa7.86□□□□□ -1.15
LRRC47-203ENST00000479239 TSPYL4Q9UJ04 414 aa7.86□□□□□ -1.15
LRRC47-203ENST00000479239 ABCA3Q99758 1704 aa7.86□□□□□ -1.15
LRRC47-203ENST00000479239 CRB1P82279 1406 aa7.86□□□□□ -1.15
LRRC47-203ENST00000479239 ELL2O00472 640 aaPredicted RBP7.85□□□□□ -1.15
LRRC47-203ENST00000479239 TWISTNBQ3B726 338 aaPredicted RBP7.85□□□□□ -1.15
LRRC47-203ENST00000479239 ALDH1L2Q3SY69 923 aa7.85□□□□□ -1.15
LRRC47-203ENST00000479239 AKAP4Q5JQC9 854 aa7.85□□□□□ -1.15
LRRC47-203ENST00000479239 TOM1L2Q6ZVM7 507 aa7.85□□□□□ -1.15
LRRC47-203ENST00000479239 C8orf58Q8NAV2 365 aa7.85□□□□□ -1.15
LRRC47-203ENST00000479239 MIS18AQ9NYP9 233 aa7.85□□□□□ -1.15
LRRC47-203ENST00000479239 SPG7Q9UQ90 795 aa7.85□□□□□ -1.15
LRRC47-203ENST00000479239 THSD7AQ9UPZ6 1657 aa7.85□□□□□ -1.15
LRRC47-203ENST00000479239 NCAPD2Q15021 1401 aa7.85□□□□□ -1.15
LRRC47-203ENST00000479239 WDR17Q8IZU2 1322 aa7.84□□□□□ -1.15
LRRC47-203ENST00000479239 ABCC6O95255 1503 aa7.84□□□□□ -1.15
LRRC47-203ENST00000479239 IPO8O15397 1037 aaKnown RBP7.84□□□□□ -1.15
LRRC47-203ENST00000479239 MS4A1P11836 297 aa7.84□□□□□ -1.15
LRRC47-203ENST00000479239 TAF7Q15545 349 aaPredicted RBP7.84□□□□□ -1.15
LRRC47-203ENST00000479239 FAM182BQ5T319 152 aa7.84□□□□□ -1.15
LRRC47-203ENST00000479239 ZKSCAN2Q63HK3 967 aa7.84□□□□□ -1.15
LRRC47-203ENST00000479239 TSPYL6Q8N831 410 aa7.84□□□□□ -1.15
LRRC47-203ENST00000479239 PANK1Q8TE04 598 aa7.84□□□□□ -1.15
LRRC47-203ENST00000479239 SPON1Q9HCB6 807 aa7.84□□□□□ -1.15
LRRC47-203ENST00000479239 BABAM1Q9NWV8 329 aa7.84□□□□□ -1.15
LRRC47-203ENST00000479239 PPP1R1BQ9UD71 204 aaPredicted RBP7.84□□□□□ -1.15
LRRC47-203ENST00000479239 KCNQ2O43526 872 aa7.83□□□□□ -1.16
LRRC47-203ENST00000479239 TEFQ10587 303 aa7.83□□□□□ -1.16
LRRC47-203ENST00000479239 MPRIPQ6WCQ1 1025 aa7.83□□□□□ -1.16
LRRC47-203ENST00000479239 CARD10Q9BWT7 1032 aa7.83□□□□□ -1.16
LRRC47-203ENST00000479239 LGR6Q9HBX8 967 aa7.83□□□□□ -1.16
LRRC47-203ENST00000479239 STRN4Q9NRL3 753 aa7.83□□□□□ -1.16
LRRC47-203ENST00000479239 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.83□□□□□ -1.163e-6■■□□□ 13.5
LRRC47-203ENST00000479239 NOB1Q9ULX3 412 aaKnown RBP7.83□□□□□ -1.16
LRRC47-203ENST00000479239 CASZ1Q86V15 1759 aa7.83□□□□□ -1.16
LRRC47-203ENST00000479239 TCERG1O14776 1098 aaKnown RBP7.82□□□□□ -1.16
LRRC47-203ENST00000479239 RNMTO43148 476 aaKnown RBP7.82□□□□□ -1.16
LRRC47-203ENST00000479239 KRT24Q2M2I5 525 aa7.82□□□□□ -1.16
LRRC47-203ENST00000479239 LARP1Q6PKG0 1096 aaKnown RBP7.82□□□□□ -1.16
LRRC47-203ENST00000479239 FTSJ3Q8IY81 847 aaKnown RBP7.82□□□□□ -1.16
LRRC47-203ENST00000479239 DZIP1LQ8IYY4 767 aaKnown RBP7.82□□□□□ -1.16
LRRC47-203ENST00000479239 MRPL50Q8N5N7 158 aaKnown RBP7.82□□□□□ -1.16
LRRC47-203ENST00000479239 CLUAP1Q96AJ1 413 aa7.82□□□□□ -1.16
LRRC47-203ENST00000479239 BTG4Q9NY30 223 aa7.82□□□□□ -1.16
LRRC47-203ENST00000479239 COG6Q9Y2V7 657 aa7.82□□□□□ -1.16
LRRC47-203ENST00000479239 COL18A1P39060 1754 aa7.82□□□□□ -1.16
LRRC47-203ENST00000479239 COL5A2P05997 1499 aaPredicted RBP7.81□□□□□ -1.16
LRRC47-203ENST00000479239 KIF16BQ96L93 1317 aa7.81□□□□□ -1.16
LRRC47-203ENST00000479239 SEMA3EO15041 775 aa7.81□□□□□ -1.16
LRRC47-203ENST00000479239 BRPF1P55201 1214 aaPredicted RBP7.81□□□□□ -1.16
LRRC47-203ENST00000479239 FAM98CQ17RN3 349 aaKnown RBP7.81□□□□□ -1.16
LRRC47-203ENST00000479239 ATF7IPQ6VMQ6 1270 aa7.81□□□□□ -1.16
LRRC47-203ENST00000479239 IFNL2Q8IZJ0 200 aa7.81□□□□□ -1.16
LRRC47-203ENST00000479239 ZC3H15Q8WU90 426 aaKnown RBP7.81□□□□□ -1.16
LRRC47-203ENST00000479239 TNNQ9UQP3 1299 aa7.81□□□□□ -1.16
LRRC47-203ENST00000479239 CCDC9Q9Y3X0 531 aaKnown RBP7.81□□□□□ -1.16
LRRC47-203ENST00000479239 CEP350Q5VT06 3117 aa7.81□□□□□ -1.16
LRRC47-203ENST00000479239 CEMIPQ8WUJ3 1361 aa7.81□□□□□ -1.16
LRRC47-203ENST00000479239 CRYBG1Q9Y4K1 1723 aa7.81□□□□□ -1.16
LRRC47-203ENST00000479239 UTRNP46939 3433 aa7.8□□□□□ -1.16
LRRC47-203ENST00000479239 MEGF6O75095 1541 aa7.8□□□□□ -1.16
LRRC47-203ENST00000479239 A0A0G2JS52 829 aa7.8□□□□□ -1.16
LRRC47-203ENST00000479239 TESPA1A2RU30 521 aaPredicted RBP7.8□□□□□ -1.16
LRRC47-203ENST00000479239 BTBD11A6QL63 1104 aa7.8□□□□□ -1.16
LRRC47-203ENST00000479239 HSP90AB1P08238 724 aaKnown RBP7.8□□□□□ -1.16
LRRC47-203ENST00000479239 RLBP1P12271 317 aa7.8□□□□□ -1.16
LRRC47-203ENST00000479239 TRIM27P14373 513 aa7.8□□□□□ -1.16
LRRC47-203ENST00000479239 IL2RBP14784 551 aa7.8□□□□□ -1.16
LRRC47-203ENST00000479239 PHKG2P15735 406 aa7.8□□□□□ -1.16
LRRC47-203ENST00000479239 MYT1Q01538 1121 aa7.8□□□□□ -1.16
LRRC47-203ENST00000479239 AAMPQ13685 434 aa7.8□□□□□ -1.16
LRRC47-203ENST00000479239 ZCRB1Q8TBF4 217 aaKnown RBP7.8□□□□□ -1.16
LRRC47-203ENST00000479239 ARHGAP45Q92619 1136 aa7.8□□□□□ -1.16
LRRC47-203ENST00000479239 PLEKHG2Q9H7P9 1386 aa7.8□□□□□ -1.16
LRRC47-203ENST00000479239 LMO7Q8WWI1 1683 aa7.79□□□□□ -1.16
LRRC47-203ENST00000479239 SOS1Q07889 1333 aaPredicted RBP7.79□□□□□ -1.16
LRRC47-203ENST00000479239 CYP27B1O15528 508 aa7.79□□□□□ -1.16
LRRC47-203ENST00000479239 GIGYF1O75420 1035 aaPredicted RBP7.79□□□□□ -1.16
LRRC47-203ENST00000479239 TRIM37O94972 964 aa7.79□□□□□ -1.16
LRRC47-203ENST00000479239 MVPQ14764 893 aaKnown RBP7.79□□□□□ -1.16
LRRC47-203ENST00000479239 ERICH6Q7L0X2 663 aa7.79□□□□□ -1.16
LRRC47-203ENST00000479239 DCAF5Q96JK2 942 aa7.79□□□□□ -1.16
LRRC47-203ENST00000479239 LARP6Q9BRS8 491 aaKnown RBP7.79□□□□□ -1.16
LRRC47-203ENST00000479239 API5Q9BZZ5 524 aaKnown RBP7.79□□□□□ -1.16
LRRC47-203ENST00000479239 USP35Q9P2H5 1018 aa7.79□□□□□ -1.16
LRRC47-203ENST00000479239 DLG5Q8TDM6 1919 aa7.79□□□□□ -1.16
LRRC47-203ENST00000479239 OVOS2A0A0G2JMS6 1433 aa7.78□□□□□ -1.16
LRRC47-203ENST00000479239 SHANK3Q9BYB0 1731 aa7.78□□□□□ -1.16
LRRC47-203ENST00000479239 PDE4AP27815 886 aa7.78□□□□□ -1.16
LRRC47-203ENST00000479239 CCDC30Q5VVM6 783 aa7.78□□□□□ -1.16
LRRC47-203ENST00000479239 ITPRIPQ8IWB1 547 aa7.78□□□□□ -1.16
LRRC47-203ENST00000479239 MS4A4AQ96JQ5 239 aa7.78□□□□□ -1.16
LRRC47-203ENST00000479239 STK31Q9BXU1 1019 aa7.78□□□□□ -1.16
LRRC47-203ENST00000479239 CHMP4AQ9BY43 222 aa7.78□□□□□ -1.16
LRRC47-203ENST00000479239 RGPD2P0DJD1 1756 aa7.78□□□□□ -1.16
LRRC47-203ENST00000479239 PCDH11XQ9BZA7 1347 aa7.78□□□□□ -1.16
LRRC47-203ENST00000479239 PCDH11YQ9BZA8 1340 aa7.78□□□□□ -1.16
LRRC47-203ENST00000479239 RGPD5Q99666 1765 aa7.77□□□□□ -1.17
LRRC47-203ENST00000479239 KCNQ3O43525 872 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms