RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 C5P01031 1676 aa19.81■□□□□ 0.76
COL16A1-211ENST00000479100 EIF4A1P60842 406 aaKnown RBP19.8■□□□□ 0.76
COL16A1-211ENST00000479100 SMIM5Q71RC9 77 aa19.8■□□□□ 0.76
COL16A1-211ENST00000479100 TEX13AQ9BXU3 409 aaPredicted RBP19.8■□□□□ 0.76
COL16A1-211ENST00000479100 IFT57Q9NWB7 429 aa19.8■□□□□ 0.76
COL16A1-211ENST00000479100 GNPATO15228 680 aa19.79■□□□□ 0.76
COL16A1-211ENST00000479100 STARD3NLO95772 234 aa19.79■□□□□ 0.76
COL16A1-211ENST00000479100 SNRPA1P09661 255 aaKnown RBP19.79■□□□□ 0.76
COL16A1-211ENST00000479100 CRKLP46109 303 aaKnown RBP19.79■□□□□ 0.76
COL16A1-211ENST00000479100 KLHL34Q8N239 644 aa19.79■□□□□ 0.76
COL16A1-211ENST00000479100 UBR2Q8IWV8 1755 aa19.79■□□□□ 0.76
COL16A1-211ENST00000479100 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.78■□□□□ 0.76
COL16A1-211ENST00000479100 PRAMEF22A3QJZ6 481 aa19.78■□□□□ 0.76
COL16A1-211ENST00000479100 PHF14O94880 888 aa19.78■□□□□ 0.76
COL16A1-211ENST00000479100 CYP19A1P11511 503 aaPredicted RBP19.78■□□□□ 0.76
COL16A1-211ENST00000479100 ZNF784Q8NCA9 323 aaPredicted RBP19.78■□□□□ 0.76
COL16A1-211ENST00000479100 MBIPQ9NS73 344 aa19.78■□□□□ 0.76
COL16A1-211ENST00000479100 C4BP0C0L5 1744 aa19.78■□□□□ 0.76
COL16A1-211ENST00000479100 TAF1LQ8IZX4 1826 aa19.78■□□□□ 0.76
COL16A1-211ENST00000479100 TJP1Q07157 1748 aa19.77■□□□□ 0.76
COL16A1-211ENST00000479100 ZNF853P0CG23 659 aa19.77■□□□□ 0.76
COL16A1-211ENST00000479100 SSFA2P28290 1259 aa19.77■□□□□ 0.76
COL16A1-211ENST00000479100 GPR162Q16538 588 aa19.77■□□□□ 0.76
COL16A1-211ENST00000479100 RC3H1Q5TC82 1133 aaKnown RBP19.77■□□□□ 0.76
COL16A1-211ENST00000479100 WDR63Q8IWG1 891 aa19.77■□□□□ 0.76
COL16A1-211ENST00000479100 CCDC87Q9NVE4 849 aa19.77■□□□□ 0.76
COL16A1-211ENST00000479100 KDM3BQ7LBC6 1761 aa19.77■□□□□ 0.76
COL16A1-211ENST00000479100 CNTNAP4Q9C0A0 1308 aa19.76■□□□□ 0.75
COL16A1-211ENST00000479100 ZNF831Q5JPB2 1677 aa19.76■□□□□ 0.75
COL16A1-211ENST00000479100 TSR2Q969E8 191 aaKnown RBP19.76■□□□□ 0.75
COL16A1-211ENST00000479100 USP16Q9Y5T5 823 aa19.76■□□□□ 0.75
COL16A1-211ENST00000479100 CANXP27824 592 aaKnown RBP19.75■□□□□ 0.75
COL16A1-211ENST00000479100 HNRNPUQ00839 825 aaKnown RBP eCLIP19.75■□□□□ 0.75
COL16A1-211ENST00000479100 INTS5Q6P9B9 1019 aaKnown RBP19.75■□□□□ 0.75
COL16A1-211ENST00000479100 RTCBQ9Y3I0 505 aaKnown RBP19.75■□□□□ 0.75
COL16A1-211ENST00000479100 CD2APQ9Y5K6 639 aa19.75■□□□□ 0.75
COL16A1-211ENST00000479100 IL16Q14005 1332 aa19.75■□□□□ 0.75
COL16A1-211ENST00000479100 GIGYF1O75420 1035 aaPredicted RBP19.74■□□□□ 0.75
COL16A1-211ENST00000479100 KRT24Q2M2I5 525 aa19.74■□□□□ 0.75
COL16A1-211ENST00000479100 RPS6KA4O75676 772 aa19.73■□□□□ 0.75
COL16A1-211ENST00000479100 A1BGP04217 495 aa19.73■□□□□ 0.75
COL16A1-211ENST00000479100 YBX3P16989 372 aaKnown RBP eCLIP19.73■□□□□ 0.75
COL16A1-211ENST00000479100 ZBTB1Q9Y2K1 713 aa19.73■□□□□ 0.75
COL16A1-211ENST00000479100 COL5A3P25940 1745 aaPredicted RBP19.73■□□□□ 0.75
COL16A1-211ENST00000479100 EIF2S2P20042 333 aaKnown RBP19.72■□□□□ 0.75
COL16A1-211ENST00000479100 ZNF330Q9Y3S2 320 aaPredicted RBP19.72■□□□□ 0.75
COL16A1-211ENST00000479100 ELL2O00472 640 aaPredicted RBP19.71■□□□□ 0.75
COL16A1-211ENST00000479100 PIP4K2AP48426 406 aaPredicted RBP19.71■□□□□ 0.75
COL16A1-211ENST00000479100 TRAPPC3LQ5T215 181 aa19.71■□□□□ 0.75
COL16A1-211ENST00000479100 NECTIN2Q92692 538 aa19.71■□□□□ 0.75
COL16A1-211ENST00000479100 CICQ96RK0 1608 aaPredicted RBP19.71■□□□□ 0.75
COL16A1-211ENST00000479100 GOLGA2Q08379 1002 aa19.7■□□□□ 0.74
COL16A1-211ENST00000479100 NPM2Q86SE8 214 aaKnown RBP19.7■□□□□ 0.74
COL16A1-211ENST00000479100 MYH16Q9H6N6 1097 aa19.7■□□□□ 0.74
COL16A1-211ENST00000479100 SPINK5Q9NQ38 1064 aaPredicted RBP19.7■□□□□ 0.74
COL16A1-211ENST00000479100 ZNF521Q96K83 1311 aa19.7■□□□□ 0.74
COL16A1-211ENST00000479100 DUSP27Q5VZP5 1158 aa19.69■□□□□ 0.74
COL16A1-211ENST00000479100 PELP1Q8IZL8 1130 aaKnown RBP19.69■□□□□ 0.74
COL16A1-211ENST00000479100 MYH14Q7Z406 1995 aaKnown RBP19.69■□□□□ 0.74
COL16A1-211ENST00000479100 FANCIQ9NVI1 1328 aa19.69■□□□□ 0.74
COL16A1-211ENST00000479100 UBR3Q6ZT12 1888 aa19.69■□□□□ 0.74
COL16A1-211ENST00000479100 RFC4P35249 363 aa19.68■□□□□ 0.74
COL16A1-211ENST00000479100 C8orf58Q8NAV2 365 aa19.68■□□□□ 0.74
COL16A1-211ENST00000479100 ARHGEF1Q92888 912 aaKnown RBP19.68■□□□□ 0.74
COL16A1-211ENST00000479100 SOS1Q07889 1333 aaPredicted RBP19.68■□□□□ 0.74
COL16A1-211ENST00000479100 GRIN3BO60391 1043 aa19.67■□□□□ 0.74
COL16A1-211ENST00000479100 ADRA2BP18089 450 aa19.67■□□□□ 0.74
COL16A1-211ENST00000479100 MYL6BP14649 208 aa19.66■□□□□ 0.74
COL16A1-211ENST00000479100 HDGFL1Q5TGJ6 251 aa19.66■□□□□ 0.74
COL16A1-211ENST00000479100 NBPF26B4DH59 902 aa19.65■□□□□ 0.74
COL16A1-211ENST00000479100 E9PSI1 815 aa19.65■□□□□ 0.74
COL16A1-211ENST00000479100 HOXB7P09629 217 aa19.65■□□□□ 0.74
COL16A1-211ENST00000479100 IL6STP40189 918 aaPredicted RBP19.65■□□□□ 0.74
COL16A1-211ENST00000479100 EIF5P55010 431 aaKnown RBP19.65■□□□□ 0.74
COL16A1-211ENST00000479100 EXOSC9Q06265 439 aaKnown RBP19.65■□□□□ 0.74
COL16A1-211ENST00000479100 NBPF10Q6P3W6 841 aaKnown RBP19.65■□□□□ 0.74
COL16A1-211ENST00000479100 NBPF15Q8N660 670 aa19.65■□□□□ 0.74
COL16A1-211ENST00000479100 TSPYL6Q8N831 410 aa19.65■□□□□ 0.74
COL16A1-211ENST00000479100 CDCA7LQ96GN5 454 aa19.65■□□□□ 0.74
COL16A1-211ENST00000479100 COL15A1P39059 1388 aa19.65■□□□□ 0.74
COL16A1-211ENST00000479100 A0A087WZG4 1122 aa19.64■□□□□ 0.73
COL16A1-211ENST00000479100 SRP68Q9UHB9 627 aaKnown RBP19.64■□□□□ 0.73
COL16A1-211ENST00000479100 LAMB4A4D0S4 1761 aa19.64■□□□□ 0.73
COL16A1-211ENST00000479100 ZPR1O75312 459 aa19.63■□□□□ 0.73
COL16A1-211ENST00000479100 MMP10P09238 476 aa19.63■□□□□ 0.73
COL16A1-211ENST00000479100 SLFN5Q08AF3 891 aa19.63■□□□□ 0.73
COL16A1-211ENST00000479100 TWISTNBQ3B726 338 aaPredicted RBP19.63■□□□□ 0.73
COL16A1-211ENST00000479100 TBC1D2BQ9UPU7 963 aa19.63■□□□□ 0.73
COL16A1-211ENST00000479100 ANXA1P04083 346 aa19.62■□□□□ 0.73
COL16A1-211ENST00000479100 ERBB4Q15303 1308 aa19.61■□□□□ 0.73
COL16A1-211ENST00000479100 GYS1P13807 737 aa19.61■□□□□ 0.73
COL16A1-211ENST00000479100 USPL1Q5W0Q7 1092 aa19.61■□□□□ 0.73
COL16A1-211ENST00000479100 NLGN1Q8N2Q7 840 aa19.61■□□□□ 0.73
COL16A1-211ENST00000479100 CHPF2Q9P2E5 772 aa19.61■□□□□ 0.73
COL16A1-211ENST00000479100 CHD4Q14839 1912 aa19.61■□□□□ 0.73
COL16A1-211ENST00000479100 USP42Q9H9J4 1324 aaKnown RBP19.6■□□□□ 0.73
COL16A1-211ENST00000479100 TCERG1O14776 1098 aaKnown RBP19.6■□□□□ 0.73
COL16A1-211ENST00000479100 PROSER3Q2NL68 480 aa19.6■□□□□ 0.73
COL16A1-211ENST00000479100 DZIP3Q86Y13 1208 aaKnown RBP19.6■□□□□ 0.73
COL16A1-211ENST00000479100 NARFQ9UHQ1 456 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms