RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 MIS18AQ9NYP9 233 aa35.04■■■■□ 3.2
CCM2-211ENST00000478582 HEG1Q9ULI3 1381 aa35.02■■■■□ 3.2
CCM2-211ENST00000478582 CALD1Q05682 793 aaKnown RBP35.02■■■■□ 3.2
CCM2-211ENST00000478582 RPS6KA4O75676 772 aa35.01■■■■□ 3.2
CCM2-211ENST00000478582 KDM3BQ7LBC6 1761 aa35■■■■□ 3.19
CCM2-211ENST00000478582 CHL1O00533 1208 aa35■■■■□ 3.19
CCM2-211ENST00000478582 TRAPPC3LQ5T215 181 aa35■■■■□ 3.19
CCM2-211ENST00000478582 WWC1Q8IX03 1113 aa35■■■■□ 3.19
CCM2-211ENST00000478582 TJP1Q07157 1748 aa35■■■■□ 3.19
CCM2-211ENST00000478582 KLHL34Q8N239 644 aa34.99■■■■□ 3.19
CCM2-211ENST00000478582 TSPYL4Q9UJ04 414 aa34.99■■■■□ 3.19
CCM2-211ENST00000478582 MYH14Q7Z406 1995 aaKnown RBP34.98■■■■□ 3.19
CCM2-211ENST00000478582 DNAJC10Q8IXB1 793 aa34.98■■■■□ 3.19
CCM2-211ENST00000478582 CFAP44Q96MT7 982 aa34.98■■■■□ 3.19
CCM2-211ENST00000478582 TEX13AQ9BXU3 409 aaPredicted RBP34.98■■■■□ 3.19
CCM2-211ENST00000478582 SENP3-EIF4A1A0A087X0R7 540 aa34.97■■■■□ 3.19
CCM2-211ENST00000478582 ADRA2BP18089 450 aa34.97■■■■□ 3.19
CCM2-211ENST00000478582 CRKLP46109 303 aaKnown RBP34.97■■■■□ 3.19
CCM2-211ENST00000478582 ZNF853P0CG23 659 aa34.96■■■■□ 3.19
CCM2-211ENST00000478582 EIF4A1P60842 406 aaKnown RBP34.96■■■■□ 3.19
CCM2-211ENST00000478582 ARHGEF1Q92888 912 aaKnown RBP34.95■■■■□ 3.19
CCM2-211ENST00000478582 IFT57Q9NWB7 429 aa34.95■■■■□ 3.19
CCM2-211ENST00000478582 CYP19A1P11511 503 aaPredicted RBP34.94■■■■□ 3.18
CCM2-211ENST00000478582 SNRPA1P09661 255 aaKnown RBP34.93■■■■□ 3.18
CCM2-211ENST00000478582 GNAI1P63096 354 aa34.93■■■■□ 3.18
CCM2-211ENST00000478582 LAS1LQ9Y4W2 734 aaKnown RBP34.92■■■■□ 3.18
CCM2-211ENST00000478582 IL16Q14005 1332 aa34.91■■■■□ 3.18
CCM2-211ENST00000478582 INTS5Q6P9B9 1019 aaKnown RBP34.91■■■■□ 3.18
CCM2-211ENST00000478582 WDR63Q8IWG1 891 aa34.91■■■■□ 3.18
CCM2-211ENST00000478582 SALL2Q9Y467 1007 aaPredicted RBP34.91■■■■□ 3.18
CCM2-211ENST00000478582 STARD3NLO95772 234 aa34.9■■■■□ 3.18
CCM2-211ENST00000478582 RFC4P35249 363 aa34.9■■■■□ 3.18
CCM2-211ENST00000478582 GIGYF1O75420 1035 aaPredicted RBP34.88■■■■□ 3.17
CCM2-211ENST00000478582 NLGN1Q8N2Q7 840 aa34.88■■■■□ 3.17
CCM2-211ENST00000478582 NLGN2Q8NFZ4 835 aa34.88■■■■□ 3.17
CCM2-211ENST00000478582 CD2APQ9Y5K6 639 aa34.88■■■■□ 3.17
CCM2-211ENST00000478582 MBIPQ9NS73 344 aa34.87■■■■□ 3.17
CCM2-211ENST00000478582 CCDC87Q9NVE4 849 aa34.87■■■■□ 3.17
CCM2-211ENST00000478582 USP16Q9Y5T5 823 aa34.87■■■■□ 3.17
CCM2-211ENST00000478582 PRAMEF22A3QJZ6 481 aa34.85■■■■□ 3.17
CCM2-211ENST00000478582 ZNF521Q96K83 1311 aa34.84■■■■□ 3.17
CCM2-211ENST00000478582 GYS1P13807 737 aa34.83■■■■□ 3.17
CCM2-211ENST00000478582 C4AP0C0L4 1744 aa34.82■■■■□ 3.16
CCM2-211ENST00000478582 MMP10P09238 476 aa34.82■■■■□ 3.16
CCM2-211ENST00000478582 GPR162Q16538 588 aa34.8■■■■□ 3.16
CCM2-211ENST00000478582 ZBTB1Q9Y2K1 713 aa34.8■■■■□ 3.16
CCM2-211ENST00000478582 SOS1Q07889 1333 aaPredicted RBP34.79■■■■□ 3.16
CCM2-211ENST00000478582 YY1P25490 414 aa34.78■■■■□ 3.16
CCM2-211ENST00000478582 USP42Q9H9J4 1324 aaKnown RBP34.78■■■■□ 3.16
CCM2-211ENST00000478582 A1BGP04217 495 aa34.77■■■■□ 3.16
CCM2-211ENST00000478582 SRP68Q9UHB9 627 aaKnown RBP34.77■■■■□ 3.16
CCM2-211ENST00000478582 LAMB4A4D0S4 1761 aa34.77■■■■□ 3.16
CCM2-211ENST00000478582 HOXB7P09629 217 aa34.76■■■■□ 3.16
CCM2-211ENST00000478582 CANXP27824 592 aaKnown RBP34.75■■■■□ 3.15
CCM2-211ENST00000478582 PELP1Q8IZL8 1130 aaKnown RBP34.75■■■■□ 3.15
CCM2-211ENST00000478582 IL6STP40189 918 aaPredicted RBP34.74■■■■□ 3.15
CCM2-211ENST00000478582 KRT24Q2M2I5 525 aa34.74■■■■□ 3.15
CCM2-211ENST00000478582 EIF5P55010 431 aaKnown RBP34.73■■■■□ 3.15
CCM2-211ENST00000478582 TSR2Q969E8 191 aaKnown RBP34.73■■■■□ 3.15
CCM2-211ENST00000478582 ZPR1O75312 459 aa34.72■■■■□ 3.15
CCM2-211ENST00000478582 SPINK5Q9NQ38 1064 aaPredicted RBP34.72■■■■□ 3.15
CCM2-211ENST00000478582 FKBP8Q14318 412 aa34.71■■■■□ 3.15
CCM2-211ENST00000478582 DUSP27Q5VZP5 1158 aa34.71■■■■□ 3.15
CCM2-211ENST00000478582 PARP3Q9Y6F1 533 aa34.71■■■■□ 3.15
CCM2-211ENST00000478582 ERBB4Q15303 1308 aa34.71■■■■□ 3.15
CCM2-211ENST00000478582 COL15A1P39059 1388 aa34.71■■■■□ 3.15
CCM2-211ENST00000478582 NARFQ9UHQ1 456 aa34.7■■■■□ 3.15
CCM2-211ENST00000478582 NBPF26B4DH59 902 aa34.69■■■■□ 3.14
CCM2-211ENST00000478582 GOLGA2Q08379 1002 aa34.69■■■■□ 3.14
CCM2-211ENST00000478582 USPL1Q5W0Q7 1092 aa34.69■■■■□ 3.14
CCM2-211ENST00000478582 NBPF10Q6P3W6 841 aaKnown RBP34.69■■■■□ 3.14
CCM2-211ENST00000478582 NBPF15Q8N660 670 aa34.69■■■■□ 3.14
CCM2-211ENST00000478582 MYH16Q9H6N6 1097 aa34.69■■■■□ 3.14
CCM2-211ENST00000478582 FANCIQ9NVI1 1328 aa34.69■■■■□ 3.14
CCM2-211ENST00000478582 C8orf58Q8NAV2 365 aa34.68■■■■□ 3.14
CCM2-211ENST00000478582 A0A087WZG4 1122 aa34.67■■■■□ 3.14
CCM2-211ENST00000478582 YBX3P16989 372 aaKnown RBP eCLIP34.67■■■■□ 3.142e-6■■□□□ 12.1
CCM2-211ENST00000478582 CHD4Q14839 1912 aa34.66■■■■□ 3.14
CCM2-211ENST00000478582 EIF2S2P20042 333 aaKnown RBP34.66■■■■□ 3.14
CCM2-211ENST00000478582 GRIN3BO60391 1043 aa34.65■■■■□ 3.14
CCM2-211ENST00000478582 TM4SF1P30408 202 aa34.65■■■■□ 3.14
CCM2-211ENST00000478582 KIF13BQ9NQT8 1826 aa34.65■■■■□ 3.14
CCM2-211ENST00000478582 PIP4K2AP48426 406 aaPredicted RBP34.64■■■■□ 3.14
CCM2-211ENST00000478582 E9PSI1 815 aa34.63■■■■□ 3.13
CCM2-211ENST00000478582 HNRNPUQ00839 825 aaKnown RBP eCLIP34.63■■■■□ 3.13
CCM2-211ENST00000478582 TGFB2P61812 414 aa34.62■■■■□ 3.13
CCM2-211ENST00000478582 PDIA6Q15084 440 aa34.62■■■■□ 3.13
CCM2-211ENST00000478582 HDGFL1Q5TGJ6 251 aa34.62■■■■□ 3.13
CCM2-211ENST00000478582 NPM2Q86SE8 214 aaKnown RBP34.62■■■■□ 3.13
CCM2-211ENST00000478582 TSPYL6Q8N831 410 aa34.62■■■■□ 3.13
CCM2-211ENST00000478582 C10orf71Q711Q0 1435 aa34.62■■■■□ 3.13
CCM2-211ENST00000478582 ELL2O00472 640 aaPredicted RBP34.61■■■■□ 3.13
CCM2-211ENST00000478582 DDR1Q08345 913 aa34.61■■■■□ 3.13
CCM2-211ENST00000478582 SLFN5Q08AF3 891 aa34.61■■■■□ 3.13
CCM2-211ENST00000478582 CHMP4AQ9BY43 222 aa34.61■■■■□ 3.13
CCM2-211ENST00000478582 BCL2L12Q9HB09 334 aa34.61■■■■□ 3.13
CCM2-211ENST00000478582 UTRNP46939 3433 aa34.59■■■■□ 3.13
CCM2-211ENST00000478582 ZNF330Q9Y3S2 320 aaPredicted RBP34.59■■■■□ 3.13
CCM2-211ENST00000478582 POLRMTO00411 1230 aaKnown RBP34.58■■■■□ 3.13
CCM2-211ENST00000478582 TWISTNBQ3B726 338 aaPredicted RBP34.58■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms