RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 MYH16Q9H6N6 1097 aa19.9■□□□□ 0.78
SEC13-215ENST00000477547 SPINK5Q9NQ38 1064 aaPredicted RBP19.9■□□□□ 0.78
SEC13-215ENST00000477547 CCNL1Q9UK58 526 aaPredicted RBP19.9■□□□□ 0.78
SEC13-215ENST00000477547 MYH14Q7Z406 1995 aaKnown RBP19.9■□□□□ 0.78
SEC13-215ENST00000477547 UBR3Q6ZT12 1888 aa19.89■□□□□ 0.77
SEC13-215ENST00000477547 E9PSI1 815 aa19.89■□□□□ 0.77
SEC13-215ENST00000477547 GIGYF1O75420 1035 aaPredicted RBP19.89■□□□□ 0.77
SEC13-215ENST00000477547 EIF4A1P60842 406 aaKnown RBP19.88■□□□□ 0.77
SEC13-215ENST00000477547 QSER1Q2KHR3 1735 aa19.88■□□□□ 0.77
SEC13-215ENST00000477547 CDCA7LQ96GN5 454 aa19.87■□□□□ 0.77
SEC13-215ENST00000477547 CEP350Q5VT06 3117 aa19.87■□□□□ 0.77
SEC13-215ENST00000477547 ATP6V1AP38606 617 aa19.86■□□□□ 0.77
SEC13-215ENST00000477547 SLFN5Q08AF3 891 aa19.86■□□□□ 0.77
SEC13-215ENST00000477547 ZNF827Q17R98 1081 aa19.86■□□□□ 0.77
SEC13-215ENST00000477547 SLC27A3Q5K4L6 730 aa19.86■□□□□ 0.77
SEC13-215ENST00000477547 KLHL34Q8N239 644 aa19.86■□□□□ 0.77
SEC13-215ENST00000477547 SLC4A9Q96Q91 983 aa19.86■□□□□ 0.77
SEC13-215ENST00000477547 CACNA1FO60840 1977 aa19.85■□□□□ 0.77
SEC13-215ENST00000477547 KCNQ4P56696 695 aa19.85■□□□□ 0.77
SEC13-215ENST00000477547 KRT24Q2M2I5 525 aa19.85■□□□□ 0.77
SEC13-215ENST00000477547 PELP1Q8IZL8 1130 aaKnown RBP19.85■□□□□ 0.77
SEC13-215ENST00000477547 VSIG10Q8N0Z9 540 aa19.85■□□□□ 0.77
SEC13-215ENST00000477547 C4AP0C0L4 1744 aa19.85■□□□□ 0.77
SEC13-215ENST00000477547 ITPK1Q13572 414 aa19.84■□□□□ 0.77
SEC13-215ENST00000477547 SNRPA1P09661 255 aaKnown RBP19.83■□□□□ 0.77
SEC13-215ENST00000477547 DNAJC10Q8IXB1 793 aa19.83■□□□□ 0.77
SEC13-215ENST00000477547 LRRC4BQ9NT99 713 aa19.83■□□□□ 0.77
SEC13-215ENST00000477547 GOLGB1Q14789 3259 aaKnown RBP19.83■□□□□ 0.76
SEC13-215ENST00000477547 PRAMEF22A3QJZ6 481 aa19.82■□□□□ 0.76
SEC13-215ENST00000477547 DUSP27Q5VZP5 1158 aa19.81■□□□□ 0.76
SEC13-215ENST00000477547 LINC00116Q8NCU8 138 aa19.81■□□□□ 0.76
SEC13-215ENST00000477547 EXOSC9Q06265 439 aaKnown RBP19.8■□□□□ 0.76
SEC13-215ENST00000477547 CNTNAP4Q9C0A0 1308 aa19.8■□□□□ 0.76
SEC13-215ENST00000477547 BCORQ6W2J9 1755 aa19.8■□□□□ 0.76
SEC13-215ENST00000477547 HOXB7P09629 217 aa19.79■□□□□ 0.76
SEC13-215ENST00000477547 TRMT2AQ8IZ69 625 aaKnown RBP19.79■□□□□ 0.76
SEC13-215ENST00000477547 C8orf58Q8NAV2 365 aa19.79■□□□□ 0.76
SEC13-215ENST00000477547 SCN7AQ01118 1682 aa19.79■□□□□ 0.76
SEC13-215ENST00000477547 ELL2O00472 640 aaPredicted RBP19.78■□□□□ 0.76
SEC13-215ENST00000477547 TWISTNBQ3B726 338 aaPredicted RBP19.78■□□□□ 0.76
SEC13-215ENST00000477547 TSPYL6Q8N831 410 aa19.78■□□□□ 0.76
SEC13-215ENST00000477547 NLGN2Q8NFZ4 835 aa19.78■□□□□ 0.76
SEC13-215ENST00000477547 TEX13AQ9BXU3 409 aaPredicted RBP19.78■□□□□ 0.76
SEC13-215ENST00000477547 SOS1Q07889 1333 aaPredicted RBP19.78■□□□□ 0.76
SEC13-215ENST00000477547 STARD3NLO95772 234 aa19.77■□□□□ 0.76
SEC13-215ENST00000477547 CYP19A1P11511 503 aaPredicted RBP19.77■□□□□ 0.76
SEC13-215ENST00000477547 HMGB2P26583 209 aaKnown RBP19.76■□□□□ 0.75
SEC13-215ENST00000477547 CRKLP46109 303 aaKnown RBP19.76■□□□□ 0.75
SEC13-215ENST00000477547 HDGFL1Q5TGJ6 251 aa19.76■□□□□ 0.75
SEC13-215ENST00000477547 AK7Q96M32 723 aa19.76■□□□□ 0.75
SEC13-215ENST00000477547 CCDC87Q9NVE4 849 aa19.76■□□□□ 0.75
SEC13-215ENST00000477547 USP16Q9Y5T5 823 aa19.76■□□□□ 0.75
SEC13-215ENST00000477547 EIF2S2P20042 333 aaKnown RBP19.76■□□□□ 0.75
SEC13-215ENST00000477547 AKT1S1Q96B36 256 aa19.76■□□□□ 0.75
SEC13-215ENST00000477547 POLD1P28340 1107 aa19.75■□□□□ 0.75
SEC13-215ENST00000477547 NECTIN2Q92692 538 aa19.75■□□□□ 0.75
SEC13-215ENST00000477547 ZBTB1Q9Y2K1 713 aa19.75■□□□□ 0.75
SEC13-215ENST00000477547 ERBB4Q15303 1308 aa19.74■□□□□ 0.75
SEC13-215ENST00000477547 ARFGEF2Q9Y6D5 1785 aa19.74■□□□□ 0.75
SEC13-215ENST00000477547 GNPATO15228 680 aa19.74■□□□□ 0.75
SEC13-215ENST00000477547 PNPLA7Q6ZV29 1317 aa19.73■□□□□ 0.75
SEC13-215ENST00000477547 YBX3P16989 372 aaKnown RBP eCLIP19.73■□□□□ 0.759e-10■■□□□ 14.4
SEC13-215ENST00000477547 SLC16A10Q8TF71 515 aa19.73■□□□□ 0.75
SEC13-215ENST00000477547 COL24A1Q17RW2 1714 aa19.72■□□□□ 0.75
SEC13-215ENST00000477547 ANKRD36CQ5JPF3 1778 aa19.72■□□□□ 0.75
SEC13-215ENST00000477547 COL15A1P39059 1388 aa19.72■□□□□ 0.75
SEC13-215ENST00000477547 A1BGP04217 495 aa19.72■□□□□ 0.75
SEC13-215ENST00000477547 CANXP27824 592 aaKnown RBP19.72■□□□□ 0.75
SEC13-215ENST00000477547 PIP4K2AP48426 406 aaPredicted RBP19.72■□□□□ 0.75
SEC13-215ENST00000477547 RC3H1Q5TC82 1133 aaKnown RBP19.72■□□□□ 0.75
SEC13-215ENST00000477547 INTS5Q6P9B9 1019 aaKnown RBP19.72■□□□□ 0.75
SEC13-215ENST00000477547 VAMP4O75379 141 aa19.71■□□□□ 0.75
SEC13-215ENST00000477547 CCDC30Q5VVM6 783 aa19.71■□□□□ 0.75
SEC13-215ENST00000477547 CHPF2Q9P2E5 772 aa19.71■□□□□ 0.75
SEC13-215ENST00000477547 ZNF330Q9Y3S2 320 aaPredicted RBP19.71■□□□□ 0.75
SEC13-215ENST00000477547 CT47B1P0C2W7 299 aaPredicted RBP19.7■□□□□ 0.74
SEC13-215ENST00000477547 CHMP4AQ9BY43 222 aa19.7■□□□□ 0.74
SEC13-215ENST00000477547 NUP98P52948 1817 aa19.7■□□□□ 0.74
SEC13-215ENST00000477547 NBPF26B4DH59 902 aa19.69■□□□□ 0.74
SEC13-215ENST00000477547 PHF14O94880 888 aa19.69■□□□□ 0.74
SEC13-215ENST00000477547 NBPF10Q6P3W6 841 aaKnown RBP19.69■□□□□ 0.74
SEC13-215ENST00000477547 NBPF15Q8N660 670 aa19.69■□□□□ 0.74
SEC13-215ENST00000477547 STK31Q9BXU1 1019 aa19.69■□□□□ 0.74
SEC13-215ENST00000477547 TFCP2L1Q9NZI6 479 aa19.69■□□□□ 0.74
SEC13-215ENST00000477547 RTCBQ9Y3I0 505 aaKnown RBP19.69■□□□□ 0.74
SEC13-215ENST00000477547 N4BP2Q86UW6 1770 aaPredicted RBP19.68■□□□□ 0.74
SEC13-215ENST00000477547 TCERG1O14776 1098 aaKnown RBP19.68■□□□□ 0.74
SEC13-215ENST00000477547 RPS6KA4O75676 772 aa19.68■□□□□ 0.74
SEC13-215ENST00000477547 ANXA1P04083 346 aa19.68■□□□□ 0.74
SEC13-215ENST00000477547 MYL6BP14649 208 aa19.68■□□□□ 0.74
SEC13-215ENST00000477547 PROSER3Q2NL68 480 aa19.68■□□□□ 0.74
SEC13-215ENST00000477547 AMIGO3Q86WK7 504 aa19.68■□□□□ 0.74
SEC13-215ENST00000477547 DBF4Q9UBU7 674 aaPredicted RBP19.68■□□□□ 0.74
SEC13-215ENST00000477547 ATP10DQ9P241 1426 aa19.67■□□□□ 0.74
SEC13-215ENST00000477547 SSFA2P28290 1259 aa19.67■□□□□ 0.74
SEC13-215ENST00000477547 IL6STP40189 918 aaPredicted RBP19.67■□□□□ 0.74
SEC13-215ENST00000477547 DDX21Q9NR30 783 aaKnown RBP eCLIP19.67■□□□□ 0.74
SEC13-215ENST00000477547 AFDNP55196 1824 aaKnown RBP19.66■□□□□ 0.74
SEC13-215ENST00000477547 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.66■□□□□ 0.74
SEC13-215ENST00000477547 GRIN3BO60391 1043 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms