RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-208ENST00000474319 ATP10DQ9P241 1426 aa12.99□□□□□ -0.33
LSS-208ENST00000474319 SRGAP3O43295 1099 aa12.99□□□□□ -0.33
LSS-208ENST00000474319 HCLS1P14317 486 aaPredicted RBP12.99□□□□□ -0.33
LSS-208ENST00000474319 CHMLP26374 656 aa12.99□□□□□ -0.33
LSS-208ENST00000474319 KCNJ4P48050 445 aa12.99□□□□□ -0.33
LSS-208ENST00000474319 REREQ9P2R6 1566 aa12.99□□□□□ -0.33
LSS-208ENST00000474319 FAM173BQ6P4H8 233 aa12.99□□□□□ -0.33
LSS-208ENST00000474319 CWC22Q9HCG8 908 aaKnown RBP12.99□□□□□ -0.33
LSS-208ENST00000474319 GCP02774 474 aa12.99□□□□□ -0.33
LSS-208ENST00000474319 HDGFL1Q5TGJ6 251 aa12.99□□□□□ -0.33
LSS-208ENST00000474319 PPP1R9BQ96SB3 815 aa12.99□□□□□ -0.33
LSS-208ENST00000474319 LRSAM1Q6UWE0 723 aa12.98□□□□□ -0.33
LSS-208ENST00000474319 CYP2E1P05181 493 aaPredicted RBP12.98□□□□□ -0.33
LSS-208ENST00000474319 ZNF445P59923 1031 aa12.98□□□□□ -0.33
LSS-208ENST00000474319 MPRIPQ6WCQ1 1025 aa12.98□□□□□ -0.33
LSS-208ENST00000474319 PPP1R42Q7Z4L9 355 aa12.98□□□□□ -0.33
LSS-208ENST00000474319 TSPY26PQ9H489 355 aa12.98□□□□□ -0.33
LSS-208ENST00000474319 NECAB1Q8N987 351 aa12.98□□□□□ -0.33
LSS-208ENST00000474319 MAP2P11137 1827 aaKnown RBP12.97□□□□□ -0.33
LSS-208ENST00000474319 AIMP1Q12904 312 aaKnown RBP12.97□□□□□ -0.33
LSS-208ENST00000474319 GIMAP6Q6P9H5 292 aa12.97□□□□□ -0.33
LSS-208ENST00000474319 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.97□□□□□ -0.33
LSS-208ENST00000474319 CCDC83Q8IWF9 413 aa12.97□□□□□ -0.33
LSS-208ENST00000474319 ATP7BP35670 1465 aa12.97□□□□□ -0.33
LSS-208ENST00000474319 USP6P35125 1406 aa12.97□□□□□ -0.33
LSS-208ENST00000474319 CCT4P50991 539 aaKnown RBP12.97□□□□□ -0.33
LSS-208ENST00000474319 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.97□□□□□ -0.33
LSS-208ENST00000474319 PA2G4Q9UQ80 394 aaKnown RBP12.97□□□□□ -0.33
LSS-208ENST00000474319 KCNQ3O43525 872 aa12.96□□□□□ -0.33
LSS-208ENST00000474319 OFD1O75665 1012 aa12.96□□□□□ -0.33
LSS-208ENST00000474319 NBPF7P0C2Y1 421 aaPredicted RBP12.96□□□□□ -0.33
LSS-208ENST00000474319 HOXC9P31274 260 aa12.96□□□□□ -0.33
LSS-208ENST00000474319 SIRT1Q96EB6 747 aa12.96□□□□□ -0.33
LSS-208ENST00000474319 SIL1Q9H173 461 aa12.96□□□□□ -0.33
LSS-208ENST00000474319 ZNF330Q9Y3S2 320 aaPredicted RBP12.96□□□□□ -0.33
LSS-208ENST00000474319 PIK3R4Q99570 1358 aa12.96□□□□□ -0.33
LSS-208ENST00000474319 NUTM2BA6NNL0 878 aaPredicted RBP12.96□□□□□ -0.33
LSS-208ENST00000474319 NUTM2EB1AL46 878 aaPredicted RBP12.96□□□□□ -0.33
LSS-208ENST00000474319 CAMK4Q16566 473 aa12.96□□□□□ -0.33
LSS-208ENST00000474319 NUTM2AQ8IVF1 878 aaPredicted RBP12.96□□□□□ -0.33
LSS-208ENST00000474319 RASEFQ8IZ41 740 aa12.96□□□□□ -0.33
LSS-208ENST00000474319 STK3Q13188 491 aa12.96□□□□□ -0.34
LSS-208ENST00000474319 UBR1Q8IWV7 1749 aa12.96□□□□□ -0.34
LSS-208ENST00000474319 CEP170BQ9Y4F5 1589 aaPredicted RBP12.96□□□□□ -0.34
LSS-208ENST00000474319 CASTP20810 708 aaKnown RBP12.95□□□□□ -0.34
LSS-208ENST00000474319 TAF7Q15545 349 aaPredicted RBP12.95□□□□□ -0.34
LSS-208ENST00000474319 PTPRCP08575 1304 aa12.95□□□□□ -0.34
LSS-208ENST00000474319 NBPF6Q5VWK0 638 aa12.95□□□□□ -0.34
LSS-208ENST00000474319 NBPF4Q96M43 638 aa12.95□□□□□ -0.34
LSS-208ENST00000474319 SRCIN1Q9C0H9 1055 aa12.95□□□□□ -0.34
LSS-208ENST00000474319 FBXW7Q969H0 707 aa12.95□□□□□ -0.34
LSS-208ENST00000474319 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.95□□□□□ -0.34
LSS-208ENST00000474319 LARGE1O95461 756 aa12.94□□□□□ -0.34
LSS-208ENST00000474319 TPM2P07951 284 aa12.94□□□□□ -0.34
LSS-208ENST00000474319 CCDC30Q5VVM6 783 aa12.94□□□□□ -0.34
LSS-208ENST00000474319 PRPF40BQ6NWY9 871 aaKnown RBP12.94□□□□□ -0.34
LSS-208ENST00000474319 PRDM11Q9NQV5 511 aa12.94□□□□□ -0.34
LSS-208ENST00000474319 RGS12O14924 1447 aa12.94□□□□□ -0.34
LSS-208ENST00000474319 ZKSCAN5Q9Y2L8 839 aa12.94□□□□□ -0.34
LSS-208ENST00000474319 ZNF530Q6P9A1 599 aaPredicted RBP12.94□□□□□ -0.34
LSS-208ENST00000474319 USP44Q9H0E7 712 aa12.94□□□□□ -0.34
LSS-208ENST00000474319 PI4KAP2A4QPH2 592 aa12.93□□□□□ -0.34
LSS-208ENST00000474319 GNAI3P08754 354 aa12.93□□□□□ -0.34
LSS-208ENST00000474319 PIP4K2AP48426 406 aaPredicted RBP12.93□□□□□ -0.34
LSS-208ENST00000474319 AK2P54819 239 aa12.93□□□□□ -0.34
LSS-208ENST00000474319 PI4KAP1Q8N8J0 262 aa12.93□□□□□ -0.34
LSS-208ENST00000474319 ANKRD24Q8TF21 1146 aa12.93□□□□□ -0.34
LSS-208ENST00000474319 SMC3Q9UQE7 1217 aa12.93□□□□□ -0.34
LSS-208ENST00000474319 NDUFB9Q9Y6M9 179 aa12.93□□□□□ -0.34
LSS-208ENST00000474319 CPSF1Q10570 1443 aaKnown RBP12.93□□□□□ -0.34
LSS-208ENST00000474319 ADAMTS2O95450 1211 aa12.93□□□□□ -0.34
LSS-208ENST00000474319 BRD1O95696 1058 aa12.93□□□□□ -0.34
LSS-208ENST00000474319 COL9A3Q14050 684 aaPredicted RBP12.93□□□□□ -0.34
LSS-208ENST00000474319 JAKMIP1Q96N16 626 aaKnown RBP12.93□□□□□ -0.34
LSS-208ENST00000474319 LGR6Q9HBX8 967 aa12.93□□□□□ -0.34
LSS-208ENST00000474319 NOL7Q9UMY1 257 aaKnown RBP12.93□□□□□ -0.34
LSS-208ENST00000474319 AXIN2Q9Y2T1 843 aa12.93□□□□□ -0.34
LSS-208ENST00000474319 SOS1Q07889 1333 aaPredicted RBP12.93□□□□□ -0.34
LSS-208ENST00000474319 EVA1CP58658 441 aa12.93□□□□□ -0.34
LSS-208ENST00000474319 TEFQ10587 303 aa12.93□□□□□ -0.34
LSS-208ENST00000474319 CADPS2Q86UW7 1296 aa12.93□□□□□ -0.34
LSS-208ENST00000474319 IL17REQ8NFR9 667 aa12.93□□□□□ -0.34
LSS-208ENST00000474319 DIAPH3Q9NSV4 1193 aa12.93□□□□□ -0.34
LSS-208ENST00000474319 CHPF2Q9P2E5 772 aa12.93□□□□□ -0.34
LSS-208ENST00000474319 NAP1L2Q9ULW6 460 aaPredicted RBP12.93□□□□□ -0.34
LSS-208ENST00000474319 KNDC1Q76NI1 1749 aa12.93□□□□□ -0.34
LSS-208ENST00000474319 USP32Q8NFA0 1604 aa12.92□□□□□ -0.34
LSS-208ENST00000474319 ATP8B2P98198 1209 aa12.92□□□□□ -0.34
LSS-208ENST00000474319 DNM1Q05193 864 aaKnown RBP12.92□□□□□ -0.34
LSS-208ENST00000474319 CEBPZQ03701 1054 aaKnown RBP12.92□□□□□ -0.34
LSS-208ENST00000474319 KLHDC4Q8TBB5 520 aa12.92□□□□□ -0.34
LSS-208ENST00000474319 TTC21AQ8NDW8 1320 aa12.92□□□□□ -0.34
LSS-208ENST00000474319 GNAT3A8MTJ3 354 aa12.92□□□□□ -0.34
LSS-208ENST00000474319 MBD3O95983 291 aa12.92□□□□□ -0.34
LSS-208ENST00000474319 CCDC8Q9H0W5 538 aaPredicted RBP12.92□□□□□ -0.34
LSS-208ENST00000474319 NRXN3Q9Y4C0 1643 aa12.92□□□□□ -0.34
LSS-208ENST00000474319 ADCY5O95622 1261 aa12.91□□□□□ -0.34
LSS-208ENST00000474319 RHPN1Q8TCX5 695 aa12.91□□□□□ -0.34
LSS-208ENST00000474319 TFIP11Q9UBB9 837 aaKnown RBP12.91□□□□□ -0.34
LSS-208ENST00000474319 CCDC39Q9UFE4 941 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms