RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 SSFA2P28290 1259 aa16.16■□□□□ 0.18
DDX56-209ENST00000473924 SMIM5Q71RC9 77 aa16.16■□□□□ 0.18
DDX56-209ENST00000473924 UBR3Q6ZT12 1888 aa16.16■□□□□ 0.18
DDX56-209ENST00000473924 PRAMEF22A3QJZ6 481 aa16.15■□□□□ 0.18
DDX56-209ENST00000473924 ZBTB7AO95365 584 aa16.15■□□□□ 0.18
DDX56-209ENST00000473924 CANXP27824 592 aaKnown RBP16.15■□□□□ 0.18
DDX56-209ENST00000473924 TRAPPC3LQ5T215 181 aa16.15■□□□□ 0.18
DDX56-209ENST00000473924 INTS5Q6P9B9 1019 aaKnown RBP16.15■□□□□ 0.18
DDX56-209ENST00000473924 COL23A1Q86Y22 540 aaPredicted RBP16.15■□□□□ 0.18
DDX56-209ENST00000473924 USP16Q9Y5T5 823 aa16.15■□□□□ 0.18
DDX56-209ENST00000473924 CASZ1Q86V15 1759 aa16.14■□□□□ 0.17
DDX56-209ENST00000473924 GIGYF1O75420 1035 aaPredicted RBP16.14■□□□□ 0.17
DDX56-209ENST00000473924 NPM2Q86SE8 214 aaKnown RBP16.14■□□□□ 0.17
DDX56-209ENST00000473924 AMIGO3Q86WK7 504 aa16.14■□□□□ 0.17
DDX56-209ENST00000473924 WDR63Q8IWG1 891 aa16.14■□□□□ 0.17
DDX56-209ENST00000473924 SLC16A10Q8TF71 515 aa16.14■□□□□ 0.17
DDX56-209ENST00000473924 MBIPQ9NS73 344 aa16.14■□□□□ 0.17
DDX56-209ENST00000473924 ZBTB1Q9Y2K1 713 aa16.14■□□□□ 0.17
DDX56-209ENST00000473924 MYH14Q7Z406 1995 aaKnown RBP16.14■□□□□ 0.17
DDX56-209ENST00000473924 ZNF853P0CG23 659 aa16.13■□□□□ 0.17
DDX56-209ENST00000473924 ADRA2BP18089 450 aa16.13■□□□□ 0.17
DDX56-209ENST00000473924 MTFR1LQ9H019 292 aa16.13■□□□□ 0.17
DDX56-209ENST00000473924 ZNF330Q9Y3S2 320 aaPredicted RBP16.13■□□□□ 0.17
DDX56-209ENST00000473924 IL16Q14005 1332 aa16.13■□□□□ 0.17
DDX56-209ENST00000473924 A1BGP04217 495 aa16.12■□□□□ 0.17
DDX56-209ENST00000473924 RFC4P35249 363 aa16.12■□□□□ 0.17
DDX56-209ENST00000473924 ARHGEF1Q92888 912 aaKnown RBP16.12■□□□□ 0.17
DDX56-209ENST00000473924 SPON1Q9HCB6 807 aa16.12■□□□□ 0.17
DDX56-209ENST00000473924 ATF5Q9Y2D1 282 aaPredicted RBP16.12■□□□□ 0.17
DDX56-209ENST00000473924 LAMB4A4D0S4 1761 aa16.1■□□□□ 0.17
DDX56-209ENST00000473924 EIF2S2P20042 333 aaKnown RBP16.1■□□□□ 0.17
DDX56-209ENST00000473924 PIP4K2AP48426 406 aaPredicted RBP16.1■□□□□ 0.17
DDX56-209ENST00000473924 KRT24Q2M2I5 525 aa16.1■□□□□ 0.17
DDX56-209ENST00000473924 TSR2Q969E8 191 aaKnown RBP16.1■□□□□ 0.17
DDX56-209ENST00000473924 SOS1Q07889 1333 aaPredicted RBP16.1■□□□□ 0.17
DDX56-209ENST00000473924 COL15A1P39059 1388 aa16.1■□□□□ 0.17
DDX56-209ENST00000473924 IL6STP40189 918 aaPredicted RBP16.09■□□□□ 0.17
DDX56-209ENST00000473924 MSL1Q68DK7 614 aa16.09■□□□□ 0.17
DDX56-209ENST00000473924 ARXQ96QS3 562 aa16.09■□□□□ 0.17
DDX56-209ENST00000473924 A0A087WZG4 1122 aa16.08■□□□□ 0.16
DDX56-209ENST00000473924 ZPR1O75312 459 aa16.08■□□□□ 0.16
DDX56-209ENST00000473924 DUSP27Q5VZP5 1158 aa16.08■□□□□ 0.16
DDX56-209ENST00000473924 NECTIN2Q92692 538 aa16.08■□□□□ 0.16
DDX56-209ENST00000473924 MYH16Q9H6N6 1097 aa16.08■□□□□ 0.16
DDX56-209ENST00000473924 ELL2O00472 640 aaPredicted RBP16.07■□□□□ 0.16
DDX56-209ENST00000473924 HOXB7P09629 217 aa16.07■□□□□ 0.16
DDX56-209ENST00000473924 POLD1P28340 1107 aa16.07■□□□□ 0.16
DDX56-209ENST00000473924 EIF5P55010 431 aaKnown RBP16.07■□□□□ 0.16
DDX56-209ENST00000473924 PPP1R1BQ9UD71 204 aaPredicted RBP16.07■□□□□ 0.16
DDX56-209ENST00000473924 C4AP0C0L4 1744 aa16.06■□□□□ 0.16
DDX56-209ENST00000473924 ZNF521Q96K83 1311 aa16.06■□□□□ 0.16
DDX56-209ENST00000473924 USP42Q9H9J4 1324 aaKnown RBP16.06■□□□□ 0.16
DDX56-209ENST00000473924 FANCIQ9NVI1 1328 aa16.06■□□□□ 0.16
DDX56-209ENST00000473924 MYL6BP14649 208 aa16.06■□□□□ 0.16
DDX56-209ENST00000473924 HNRNPUQ00839 825 aaKnown RBP eCLIP16.06■□□□□ 0.16
DDX56-209ENST00000473924 GOLGA2Q08379 1002 aa16.06■□□□□ 0.16
DDX56-209ENST00000473924 HDGFL1Q5TGJ6 251 aa16.06■□□□□ 0.16
DDX56-209ENST00000473924 SRP68Q9UHB9 627 aaKnown RBP16.06■□□□□ 0.16
DDX56-209ENST00000473924 ERBB4Q15303 1308 aa16.05■□□□□ 0.16
DDX56-209ENST00000473924 NBPF26B4DH59 902 aa16.05■□□□□ 0.16
DDX56-209ENST00000473924 USPL1Q5W0Q7 1092 aa16.05■□□□□ 0.16
DDX56-209ENST00000473924 NBPF10Q6P3W6 841 aaKnown RBP16.05■□□□□ 0.16
DDX56-209ENST00000473924 NLGN1Q8N2Q7 840 aa16.05■□□□□ 0.16
DDX56-209ENST00000473924 NBPF15Q8N660 670 aa16.05■□□□□ 0.16
DDX56-209ENST00000473924 C8orf58Q8NAV2 365 aa16.05■□□□□ 0.16
DDX56-209ENST00000473924 NARFQ9UHQ1 456 aa16.05■□□□□ 0.16
DDX56-209ENST00000473924 TBC1D2BQ9UPU7 963 aa16.05■□□□□ 0.16
DDX56-209ENST00000473924 LRP5O75197 1615 aa16.05■□□□□ 0.16
DDX56-209ENST00000473924 GYS1P13807 737 aa16.04■□□□□ 0.16
DDX56-209ENST00000473924 PTGER2P43116 358 aa16.04■□□□□ 0.16
DDX56-209ENST00000473924 DZIP3Q86Y13 1208 aaKnown RBP16.04■□□□□ 0.16
DDX56-209ENST00000473924 CHMP4AQ9BY43 222 aa16.04■□□□□ 0.16
DDX56-209ENST00000473924 SPINK5Q9NQ38 1064 aaPredicted RBP16.04■□□□□ 0.16
DDX56-209ENST00000473924 E9PSI1 815 aa16.02■□□□□ 0.16
DDX56-209ENST00000473924 TWISTNBQ3B726 338 aaPredicted RBP16.02■□□□□ 0.16
DDX56-209ENST00000473924 TSPYL6Q8N831 410 aa16.02■□□□□ 0.16
DDX56-209ENST00000473924 DBF4Q9UBU7 674 aaPredicted RBP16.02■□□□□ 0.16
DDX56-209ENST00000473924 ANXA1P04083 346 aa16.01■□□□□ 0.15
DDX56-209ENST00000473924 EXOSC9Q06265 439 aaKnown RBP16.01■□□□□ 0.15
DDX56-209ENST00000473924 FKBP8Q14318 412 aa16.01■□□□□ 0.15
DDX56-209ENST00000473924 KIF6Q6ZMV9 814 aa16.01■□□□□ 0.15
DDX56-209ENST00000473924 SGIP1Q9BQI5 828 aa16.01■□□□□ 0.15
DDX56-209ENST00000473924 DDX21Q9NR30 783 aaKnown RBP eCLIP16.01■□□□□ 0.15
DDX56-209ENST00000473924 CHPF2Q9P2E5 772 aa16.01■□□□□ 0.15
DDX56-209ENST00000473924 MMP10P09238 476 aa16■□□□□ 0.15
DDX56-209ENST00000473924 PDIA6Q15084 440 aa16■□□□□ 0.15
DDX56-209ENST00000473924 CCDC30Q5VVM6 783 aa16■□□□□ 0.15
DDX56-209ENST00000473924 ZNF652Q9Y2D9 606 aa16■□□□□ 0.15
DDX56-209ENST00000473924 COL24A1Q17RW2 1714 aa15.99■□□□□ 0.15
DDX56-209ENST00000473924 CAMTA2O94983 1202 aa15.99■□□□□ 0.15
DDX56-209ENST00000473924 SLFN5Q08AF3 891 aa15.99■□□□□ 0.15
DDX56-209ENST00000473924 AIMP1Q12904 312 aaKnown RBP15.99■□□□□ 0.15
DDX56-209ENST00000473924 PROSER3Q2NL68 480 aa15.99■□□□□ 0.15
DDX56-209ENST00000473924 KLHL34Q8N239 644 aa15.99■□□□□ 0.15
DDX56-209ENST00000473924 CDCA7LQ96GN5 454 aa15.99■□□□□ 0.15
DDX56-209ENST00000473924 PARP3Q9Y6F1 533 aa15.99■□□□□ 0.15
DDX56-209ENST00000473924 BICDL1Q6ZP65 573 aa15.98■□□□□ 0.15
DDX56-209ENST00000473924 TTLL7Q6ZT98 887 aa15.98■□□□□ 0.15
DDX56-209ENST00000473924 STK31Q9BXU1 1019 aa15.98■□□□□ 0.15
DDX56-209ENST00000473924 BCL2L12Q9HB09 334 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms