RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 TBC1D2Q9BYX2 928 aa12.64□□□□□ -0.39
APTX-216ENST00000472896 PRDM4Q9UKN5 801 aa12.64□□□□□ -0.39
APTX-216ENST00000472896 CYP27B1O15528 508 aa12.64□□□□□ -0.39
APTX-216ENST00000472896 RAPGEF4Q8WZA2 1011 aa12.64□□□□□ -0.39
APTX-216ENST00000472896 AK7Q96M32 723 aa12.64□□□□□ -0.39
APTX-216ENST00000472896 TATP17735 454 aaPredicted RBP12.63□□□□□ -0.39
APTX-216ENST00000472896 TRMT2AQ8IZ69 625 aaKnown RBP12.63□□□□□ -0.39
APTX-216ENST00000472896 PUS7Q96PZ0 661 aaKnown RBP12.63□□□□□ -0.39
APTX-216ENST00000472896 TOGARAM1Q9Y4F4 1720 aa12.63□□□□□ -0.39
APTX-216ENST00000472896 PDE3AQ14432 1141 aa12.62□□□□□ -0.39
APTX-216ENST00000472896 SKOR2Q2VWA4 1001 aaPredicted RBP12.62□□□□□ -0.39
APTX-216ENST00000472896 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.62□□□□□ -0.39
APTX-216ENST00000472896 LINC00116Q8NCU8 138 aa12.62□□□□□ -0.39
APTX-216ENST00000472896 PIGBQ92521 554 aa12.62□□□□□ -0.39
APTX-216ENST00000472896 C4BP0C0L5 1744 aa12.62□□□□□ -0.39
APTX-216ENST00000472896 TOMM70O94826 608 aa12.61□□□□□ -0.39
APTX-216ENST00000472896 HTRA3P83110 453 aa12.61□□□□□ -0.39
APTX-216ENST00000472896 SLFN5Q08AF3 891 aa12.61□□□□□ -0.39
APTX-216ENST00000472896 CCDC173Q0VFZ6 552 aa12.61□□□□□ -0.39
APTX-216ENST00000472896 HSP90AB2PQ58FF8 381 aa12.61□□□□□ -0.39
APTX-216ENST00000472896 SMAP1Q8IYB5 467 aaPredicted RBP12.61□□□□□ -0.39
APTX-216ENST00000472896 NGEFQ8N5V2 710 aa12.61□□□□□ -0.39
APTX-216ENST00000472896 NMRK2Q9NPI5 230 aa12.61□□□□□ -0.39
APTX-216ENST00000472896 OFD1O75665 1012 aa12.61□□□□□ -0.39
APTX-216ENST00000472896 COL13A1Q5TAT6 717 aaPredicted RBP12.61□□□□□ -0.39
APTX-216ENST00000472896 SMARCC1Q92922 1105 aaPredicted RBP12.61□□□□□ -0.39
APTX-216ENST00000472896 UBR3Q6ZT12 1888 aa12.6□□□□□ -0.39
APTX-216ENST00000472896 ERBB4Q15303 1308 aa12.6□□□□□ -0.39
APTX-216ENST00000472896 A0A0G2JLW4 131 aa12.6□□□□□ -0.39
APTX-216ENST00000472896 FYB1O15117 783 aa12.6□□□□□ -0.39
APTX-216ENST00000472896 SEC24BO95487 1268 aa12.6□□□□□ -0.39
APTX-216ENST00000472896 KIAA1211Q6ZU35 1233 aa12.6□□□□□ -0.39
APTX-216ENST00000472896 PCDH11XQ9BZA7 1347 aa12.59□□□□□ -0.39
APTX-216ENST00000472896 PCDH11YQ9BZA8 1340 aa12.59□□□□□ -0.39
APTX-216ENST00000472896 SSFA2P28290 1259 aa12.59□□□□□ -0.39
APTX-216ENST00000472896 ITPK1Q13572 414 aa12.59□□□□□ -0.39
APTX-216ENST00000472896 TESK2Q96S53 571 aa12.59□□□□□ -0.39
APTX-216ENST00000472896 PPP1R9BQ96SB3 815 aa12.59□□□□□ -0.39
APTX-216ENST00000472896 GGNBP2Q9H3C7 697 aa12.59□□□□□ -0.39
APTX-216ENST00000472896 LOC102724428A0A0B4J2F2 783 aa12.58□□□□□ -0.39
APTX-216ENST00000472896 IGHDP01880 384 aa12.58□□□□□ -0.39
APTX-216ENST00000472896 MMP10P09238 476 aa12.58□□□□□ -0.39
APTX-216ENST00000472896 HMGB2P26583 209 aaKnown RBP12.58□□□□□ -0.39
APTX-216ENST00000472896 SIK1P57059 783 aa12.58□□□□□ -0.39
APTX-216ENST00000472896 RBM10P98175 930 aaKnown RBP12.58□□□□□ -0.39
APTX-216ENST00000472896 ARHGAP27Q6ZUM4 889 aa12.58□□□□□ -0.39
APTX-216ENST00000472896 GZF1Q9H116 711 aaPredicted RBP12.58□□□□□ -0.39
APTX-216ENST00000472896 RTL1A6NKG5 1358 aa12.58□□□□□ -0.4
APTX-216ENST00000472896 ITGB4P16144 1822 aa12.58□□□□□ -0.4
APTX-216ENST00000472896 WDR43Q15061 677 aaKnown RBP eCLIP12.58□□□□□ -0.4
APTX-216ENST00000472896 ZSCAN30Q86W11 494 aa12.58□□□□□ -0.4
APTX-216ENST00000472896 ASAP1Q9ULH1 1129 aa12.58□□□□□ -0.4
APTX-216ENST00000472896 BCS1LQ9Y276 419 aa12.58□□□□□ -0.4
APTX-216ENST00000472896 CICQ96RK0 1608 aaPredicted RBP12.57□□□□□ -0.4
APTX-216ENST00000472896 PXDNLA1KZ92 1463 aa12.57□□□□□ -0.4
APTX-216ENST00000472896 MAP2P11137 1827 aaKnown RBP12.57□□□□□ -0.4
APTX-216ENST00000472896 GNPATO15228 680 aa12.57□□□□□ -0.4
APTX-216ENST00000472896 NKX1-1Q15270 411 aaPredicted RBP12.57□□□□□ -0.4
APTX-216ENST00000472896 HS1BP3Q53T59 392 aa12.57□□□□□ -0.4
APTX-216ENST00000472896 CLUAP1Q96AJ1 413 aa12.57□□□□□ -0.4
APTX-216ENST00000472896 CIZ1Q9ULV3 898 aaPredicted RBP12.57□□□□□ -0.4
APTX-216ENST00000472896 ADAMTS8Q9UP79 889 aa12.57□□□□□ -0.4
APTX-216ENST00000472896 CAPN15O75808 1086 aa12.56□□□□□ -0.4
APTX-216ENST00000472896 KIAA1551Q9HCM1 1747 aa12.56□□□□□ -0.4
APTX-216ENST00000472896 DPEP1P16444 411 aa12.56□□□□□ -0.4
APTX-216ENST00000472896 TGFB2P61812 414 aa12.56□□□□□ -0.4
APTX-216ENST00000472896 ANP32BQ92688 251 aaKnown RBP12.56□□□□□ -0.4
APTX-216ENST00000472896 KLRG1Q96E93 195 aa12.56□□□□□ -0.4
APTX-216ENST00000472896 N4BP2Q86UW6 1770 aaPredicted RBP12.55□□□□□ -0.4
APTX-216ENST00000472896 E9PSI1 815 aa12.55□□□□□ -0.4
APTX-216ENST00000472896 HOXD11P31277 338 aaPredicted RBP12.55□□□□□ -0.4
APTX-216ENST00000472896 JMYQ8N9B5 988 aa12.55□□□□□ -0.4
APTX-216ENST00000472896 RBM46Q8TBY0 533 aaKnown RBP12.55□□□□□ -0.4
APTX-216ENST00000472896 GBP4Q96PP9 640 aa12.55□□□□□ -0.4
APTX-216ENST00000472896 KCNA3P22001 575 aa12.54□□□□□ -0.4
APTX-216ENST00000472896 ATP6V1AP38606 617 aa12.54□□□□□ -0.4
APTX-216ENST00000472896 CC2D1BQ5T0F9 858 aaKnown RBP12.54□□□□□ -0.4
APTX-216ENST00000472896 C9orf131Q5VYM1 1079 aa12.54□□□□□ -0.4
APTX-216ENST00000472896 NSD3Q9BZ95 1437 aa12.54□□□□□ -0.4
APTX-216ENST00000472896 IBTKQ9P2D0 1353 aaPredicted RBP12.54□□□□□ -0.4
APTX-216ENST00000472896 NPM3O75607 178 aaKnown RBP12.53□□□□□ -0.4
APTX-216ENST00000472896 FCHSD2O94868 740 aa12.53□□□□□ -0.4
APTX-216ENST00000472896 NCLP19338 710 aaKnown RBP12.53□□□□□ -0.4
APTX-216ENST00000472896 MSNP26038 577 aaKnown RBP12.53□□□□□ -0.4
APTX-216ENST00000472896 ATG3Q9NT62 314 aa12.53□□□□□ -0.4
APTX-216ENST00000472896 TMF1P82094 1093 aa12.53□□□□□ -0.4
APTX-216ENST00000472896 UTP14CQ5TAP6 766 aaKnown RBP12.53□□□□□ -0.4
APTX-216ENST00000472896 HSCBQ8IWL3 235 aa12.53□□□□□ -0.4
APTX-216ENST00000472896 SLC4A9Q96Q91 983 aa12.53□□□□□ -0.4
APTX-216ENST00000472896 KIF13BQ9NQT8 1826 aa12.53□□□□□ -0.4
APTX-216ENST00000472896 RIPK4P57078 832 aa12.52□□□□□ -0.41
APTX-216ENST00000472896 ARHGEF1Q92888 912 aaKnown RBP12.52□□□□□ -0.41
APTX-216ENST00000472896 PANK3Q9H999 370 aa12.52□□□□□ -0.41
APTX-216ENST00000472896 TMOD3Q9NYL9 352 aa12.52□□□□□ -0.41
APTX-216ENST00000472896 EMILIN1Q9Y6C2 1016 aa12.52□□□□□ -0.41
APTX-216ENST00000472896 WDR90Q96KV7 1748 aa12.52□□□□□ -0.41
APTX-216ENST00000472896 DDIT3P35638 169 aa12.51□□□□□ -0.41
APTX-216ENST00000472896 AMER1Q5JTC6 1135 aaPredicted RBP12.51□□□□□ -0.41
APTX-216ENST00000472896 TRAPPC3LQ5T215 181 aa12.51□□□□□ -0.41
APTX-216ENST00000472896 NLGN1Q8N2Q7 840 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms