RNA–Protein interactions for RNA: ENST00000467908.1

PDXK-209, Transcript of pyridoxal kinase, human

TSL 3 BASIC

Gene PDXK, Length 7,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDXK-209	ENST00000467908	EIF4A2	Q14240	407 aa	Known RBP	13.4	□□□□□ -0.26
PDXK-209	ENST00000467908	API5	Q9BZZ5	524 aa	Known RBP	13.4	□□□□□ -0.27
PDXK-209	ENST00000467908	PIK3C2B	O00750	1634 aa		13.39	□□□□□ -0.27
PDXK-209	ENST00000467908	BCAR3	O75815	825 aa		13.39	□□□□□ -0.27
PDXK-209	ENST00000467908	PDE4A	P27815	886 aa		13.39	□□□□□ -0.27
PDXK-209	ENST00000467908	SERPINA10	Q9UK55	444 aa		13.39	□□□□□ -0.27
PDXK-209	ENST00000467908	PREX1	Q8TCU6	1659 aa		13.39	□□□□□ -0.27
PDXK-209	ENST00000467908	RFX1	P22670	979 aa		13.39	□□□□□ -0.27
PDXK-209	ENST00000467908	WDR63	Q8IWG1	891 aa		13.39	□□□□□ -0.27
PDXK-209	ENST00000467908	IPO4	Q8TEX9	1081 aa	Known RBP	13.39	□□□□□ -0.27
PDXK-209	ENST00000467908	ZC3H13	Q5T200	1668 aa	Known RBP	13.39	□□□□□ -0.27
PDXK-209	ENST00000467908	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.38	□□□□□ -0.27
PDXK-209	ENST00000467908	CENPH	Q9H3R5	247 aa		13.38	□□□□□ -0.27
PDXK-209	ENST00000467908	ST18	O60284	1047 aa		13.38	□□□□□ -0.27
PDXK-209	ENST00000467908	ZRSR2	Q15696	482 aa	Known RBP	13.38	□□□□□ -0.27
PDXK-209	ENST00000467908	ACSBG1	Q96GR2	724 aa		13.38	□□□□□ -0.27
PDXK-209	ENST00000467908	NOB1	Q9ULX3	412 aa	Known RBP	13.38	□□□□□ -0.27
PDXK-209	ENST00000467908	USP8	P40818	1118 aa		13.38	□□□□□ -0.27
PDXK-209	ENST00000467908	MRPS9	P82933	396 aa	Known RBP	13.38	□□□□□ -0.27
PDXK-209	ENST00000467908	CCDC173	Q0VFZ6	552 aa		13.38	□□□□□ -0.27
PDXK-209	ENST00000467908	MAP3K19	Q56UN5	1328 aa		13.38	□□□□□ -0.27
PDXK-209	ENST00000467908	GRIPAP1	Q4V328	841 aa		13.37	□□□□□ -0.27
PDXK-209	ENST00000467908	EDC4	Q6P2E9	1401 aa	Known RBP	13.37	□□□□□ -0.27
PDXK-209	ENST00000467908	KIF13A	Q9H1H9	1805 aa		13.37	□□□□□ -0.27
PDXK-209	ENST00000467908	EP400NL	Q6ZTU2	488 aa		13.37	□□□□□ -0.27
PDXK-209	ENST00000467908	CCDC39	Q9UFE4	941 aa		13.37	□□□□□ -0.27
PDXK-209	ENST00000467908	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.37	□□□□□ -0.27
PDXK-209	ENST00000467908	ALK	Q9UM73	1620 aa		13.37	□□□□□ -0.27
PDXK-209	ENST00000467908	KIAA0754	O94854	1291 aa		13.37	□□□□□ -0.27
PDXK-209	ENST00000467908	KCNA4	P22459	653 aa		13.37	□□□□□ -0.27
PDXK-209	ENST00000467908	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.37	□□□□□ -0.27	7e-11	■■■■■ 39.3
PDXK-209	ENST00000467908	PTPRM	P28827	1452 aa		13.37	□□□□□ -0.27
PDXK-209	ENST00000467908	TANGO6	Q9C0B7	1094 aa		13.36	□□□□□ -0.27
PDXK-209	ENST00000467908	DDX19B	Q9UMR2	479 aa		13.36	□□□□□ -0.27
PDXK-209	ENST00000467908	CNNM1	Q9NRU3	951 aa		13.36	□□□□□ -0.27
PDXK-209	ENST00000467908	HOXC9	P31274	260 aa		13.36	□□□□□ -0.27
PDXK-209	ENST00000467908	CPLX2	Q6PUV4	134 aa	Known RBP	13.36	□□□□□ -0.27
PDXK-209	ENST00000467908	TAF7	Q15545	349 aa	Predicted RBP	13.36	□□□□□ -0.27
PDXK-209	ENST00000467908	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.36	□□□□□ -0.27
PDXK-209	ENST00000467908	MADD	Q8WXG6	1647 aa		13.35	□□□□□ -0.27
PDXK-209	ENST00000467908	VPS37C	A5D8V6	355 aa	Predicted RBP	13.35	□□□□□ -0.27
PDXK-209	ENST00000467908	PER1	O15534	1290 aa	Predicted RBP	13.35	□□□□□ -0.27
PDXK-209	ENST00000467908	HOMER2	Q9NSB8	354 aa		13.35	□□□□□ -0.27
PDXK-209	ENST00000467908	AGL	P35573	1532 aa		13.35	□□□□□ -0.27
PDXK-209	ENST00000467908	ZMYM4	Q5VZL5	1548 aa		13.35	□□□□□ -0.27
PDXK-209	ENST00000467908	ZNF354C	Q86Y25	554 aa		13.35	□□□□□ -0.27
PDXK-209	ENST00000467908	ZCRB1	Q8TBF4	217 aa	Known RBP	13.35	□□□□□ -0.27
PDXK-209	ENST00000467908	NF2	P35240	595 aa		13.35	□□□□□ -0.27
PDXK-209	ENST00000467908	NFKBIB	Q15653	356 aa		13.35	□□□□□ -0.27
PDXK-209	ENST00000467908	MRE11	P49959	708 aa		13.35	□□□□□ -0.27
PDXK-209	ENST00000467908	IFNL2	Q8IZJ0	200 aa		13.35	□□□□□ -0.27
PDXK-209	ENST00000467908	FLT4	P35916	1363 aa		13.34	□□□□□ -0.27
PDXK-209	ENST00000467908	USP5	P45974	858 aa		13.34	□□□□□ -0.27
PDXK-209	ENST00000467908	CGN	Q9P2M7	1197 aa	Known RBP	13.34	□□□□□ -0.27
PDXK-209	ENST00000467908	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.34	□□□□□ -0.27
PDXK-209	ENST00000467908	TRPM1	Q7Z4N2	1603 aa		13.34	□□□□□ -0.27
PDXK-209	ENST00000467908	SIRT1	Q96EB6	747 aa		13.34	□□□□□ -0.27
PDXK-209	ENST00000467908	UQCRH	P07919	91 aa		13.34	□□□□□ -0.27
PDXK-209	ENST00000467908	ERCC4	Q92889	916 aa	Predicted RBP	13.34	□□□□□ -0.27
PDXK-209	ENST00000467908	NASP	P49321	788 aa	Predicted RBP	13.34	□□□□□ -0.27
PDXK-209	ENST00000467908	FAM161A	Q3B820	660 aa		13.34	□□□□□ -0.27
PDXK-209	ENST00000467908	TICAM2	Q86XR7	235 aa		13.34	□□□□□ -0.27
PDXK-209	ENST00000467908	DUSP27	Q5VZP5	1158 aa		13.34	□□□□□ -0.27
PDXK-209	ENST00000467908	HOOK1	Q9UJC3	728 aa	Known RBP	13.34	□□□□□ -0.27
PDXK-209	ENST00000467908	LMTK2	Q8IWU2	1503 aa		13.34	□□□□□ -0.27
PDXK-209	ENST00000467908	CEBPZ	Q03701	1054 aa	Known RBP	13.33	□□□□□ -0.27
PDXK-209	ENST00000467908	TRERF1	Q96PN7	1200 aa		13.33	□□□□□ -0.27
PDXK-209	ENST00000467908	CLASRP	Q8N2M8	674 aa	Known RBP	13.33	□□□□□ -0.28
PDXK-209	ENST00000467908	UQCRHL	A0A096LP55	91 aa		13.33	□□□□□ -0.28
PDXK-209	ENST00000467908	IP6K1	Q92551	441 aa		13.33	□□□□□ -0.28
PDXK-209	ENST00000467908	C1orf115	Q9H7X2	142 aa		13.33	□□□□□ -0.28
PDXK-209	ENST00000467908	CLEC11A	Q9Y240	323 aa		13.33	□□□□□ -0.28
PDXK-209	ENST00000467908	SSB	P05455	408 aa	Known RBP eCLIP	13.33	□□□□□ -0.28
PDXK-209	ENST00000467908	EYA1	Q99502	592 aa		13.33	□□□□□ -0.28
PDXK-209	ENST00000467908	BRMS1	Q9HCU9	246 aa		13.33	□□□□□ -0.28
PDXK-209	ENST00000467908	SYNM	O15061	1565 aa		13.33	□□□□□ -0.28
PDXK-209	ENST00000467908	PLEKHG3	A1L390	1219 aa		13.33	□□□□□ -0.28
PDXK-209	ENST00000467908	UBTFL1	P0CB47	393 aa	Predicted RBP	13.33	□□□□□ -0.28
PDXK-209	ENST00000467908	ZNF76	P36508	570 aa		13.32	□□□□□ -0.28
PDXK-209	ENST00000467908	INCENP	Q9NQS7	918 aa		13.32	□□□□□ -0.28
PDXK-209	ENST00000467908	SIL1	Q9H173	461 aa		13.32	□□□□□ -0.28
PDXK-209	ENST00000467908	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.32	□□□□□ -0.28	1e-6	■■□□□ 13.6
PDXK-209	ENST00000467908	QRICH2	Q9H0J4	1663 aa		13.32	□□□□□ -0.28
PDXK-209	ENST00000467908	ANAPC15	P60006	121 aa		13.32	□□□□□ -0.28
PDXK-209	ENST00000467908	SAFB	Q15424	915 aa	Known RBP eCLIP	13.32	□□□□□ -0.28	1e-8	■□□□□ 10.6
PDXK-209	ENST00000467908	DDB1	Q16531	1140 aa		13.32	□□□□□ -0.28
PDXK-209	ENST00000467908	PARD3	Q8TEW0	1356 aa		13.32	□□□□□ -0.28
PDXK-209	ENST00000467908	STARD3NL	O95772	234 aa		13.32	□□□□□ -0.28
PDXK-209	ENST00000467908	SLFN5	Q08AF3	891 aa		13.31	□□□□□ -0.28
PDXK-209	ENST00000467908	CCDC181	Q5TID7	509 aa		13.31	□□□□□ -0.28
PDXK-209	ENST00000467908	FAM193A	P78312	1265 aa		13.31	□□□□□ -0.28
PDXK-209	ENST00000467908	SLC4A8	Q2Y0W8	1093 aa		13.31	□□□□□ -0.28
PDXK-209	ENST00000467908	DDX23	Q9BUQ8	820 aa	Known RBP	13.31	□□□□□ -0.28
PDXK-209	ENST00000467908	IL2RB	P14784	551 aa		13.31	□□□□□ -0.28
PDXK-209	ENST00000467908	FRMPD1	Q5SYB0	1578 aa		13.31	□□□□□ -0.28
PDXK-209	ENST00000467908	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.31	□□□□□ -0.28
PDXK-209	ENST00000467908	SART3	Q15020	963 aa	Known RBP	13.3	□□□□□ -0.28
PDXK-209	ENST00000467908	KDM4F	A0A1W2PPD8	638 aa		13.3	□□□□□ -0.28
PDXK-209	ENST00000467908	IRX3	P78415	501 aa	Predicted RBP	13.3	□□□□□ -0.28
PDXK-209	ENST00000467908	PRR36	Q9H6K5	1346 aa		13.3	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms