RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 SOS1Q07889 1333 aaPredicted RBP16.12■□□□□ 0.17
GTF3A-205ENST00000466776 COL15A1P39059 1388 aa16.12■□□□□ 0.17
GTF3A-205ENST00000466776 KIF3CO14782 793 aa16.11■□□□□ 0.17
GTF3A-205ENST00000466776 SLC39A6Q13433 755 aa16.11■□□□□ 0.17
GTF3A-205ENST00000466776 MTHFSDQ2M296 383 aaKnown RBP16.11■□□□□ 0.17
GTF3A-205ENST00000466776 USPL1Q5W0Q7 1092 aa16.11■□□□□ 0.17
GTF3A-205ENST00000466776 VSIG10Q8N0Z9 540 aa16.11■□□□□ 0.17
GTF3A-205ENST00000466776 NPC1L1Q9UHC9 1359 aa16.11■□□□□ 0.17
GTF3A-205ENST00000466776 NRXN2Q9P2S2 1712 aa16.11■□□□□ 0.17
GTF3A-205ENST00000466776 SIPA1L3O60292 1781 aaPredicted RBP16.1■□□□□ 0.17
GTF3A-205ENST00000466776 POLRMTO00411 1230 aaKnown RBP16.1■□□□□ 0.17
GTF3A-205ENST00000466776 PER1O15534 1290 aaPredicted RBP16.1■□□□□ 0.17
GTF3A-205ENST00000466776 CYP19A1P11511 503 aaPredicted RBP16.1■□□□□ 0.17
GTF3A-205ENST00000466776 DDR1Q08345 913 aa16.1■□□□□ 0.17
GTF3A-205ENST00000466776 NARFQ9UHQ1 456 aa16.1■□□□□ 0.17
GTF3A-205ENST00000466776 TNRC6CQ9HCJ0 1690 aaKnown RBP16.1■□□□□ 0.17
GTF3A-205ENST00000466776 CCDC88AQ3V6T2 1871 aa16.1■□□□□ 0.17
GTF3A-205ENST00000466776 U2SURPO15042 1029 aaKnown RBP16.09■□□□□ 0.17
GTF3A-205ENST00000466776 TOMM70O94826 608 aa16.09■□□□□ 0.17
GTF3A-205ENST00000466776 STARD3NLO95772 234 aa16.09■□□□□ 0.17
GTF3A-205ENST00000466776 KCNA3P22001 575 aa16.09■□□□□ 0.17
GTF3A-205ENST00000466776 TEFQ10587 303 aa16.09■□□□□ 0.17
GTF3A-205ENST00000466776 C16orf71Q8IYS4 520 aaPredicted RBP16.09■□□□□ 0.17
GTF3A-205ENST00000466776 GAS2L2Q8NHY3 880 aa16.09■□□□□ 0.17
GTF3A-205ENST00000466776 TM4SF1P30408 202 aa16.08■□□□□ 0.16
GTF3A-205ENST00000466776 C9orf131Q5VYM1 1079 aa16.08■□□□□ 0.16
GTF3A-205ENST00000466776 ZBTB1Q9Y2K1 713 aa16.08■□□□□ 0.16
GTF3A-205ENST00000466776 KDM2BQ8NHM5 1336 aa16.08■□□□□ 0.16
GTF3A-205ENST00000466776 A0A087WZG4 1122 aa16.07■□□□□ 0.16
GTF3A-205ENST00000466776 GNAT3A8MTJ3 354 aa16.07■□□□□ 0.16
GTF3A-205ENST00000466776 APLP1P51693 650 aa16.07■□□□□ 0.16
GTF3A-205ENST00000466776 NPM2Q86SE8 214 aaKnown RBP16.07■□□□□ 0.16
GTF3A-205ENST00000466776 TEX13AQ9BXU3 409 aaPredicted RBP16.07■□□□□ 0.16
GTF3A-205ENST00000466776 COL3A1P02461 1466 aaPredicted RBP16.07■□□□□ 0.16
GTF3A-205ENST00000466776 SCN7AQ01118 1682 aa16.06■□□□□ 0.16
GTF3A-205ENST00000466776 CHRNA5P30532 468 aa16.06■□□□□ 0.16
GTF3A-205ENST00000466776 CNKSR2Q8WXI2 1034 aa16.06■□□□□ 0.16
GTF3A-205ENST00000466776 CFAP53Q96M91 514 aa16.06■□□□□ 0.16
GTF3A-205ENST00000466776 RNF181Q9P0P0 153 aa16.06■□□□□ 0.16
GTF3A-205ENST00000466776 CANXP27824 592 aaKnown RBP16.05■□□□□ 0.16
GTF3A-205ENST00000466776 CNGB1Q14028 1251 aaPredicted RBP16.05■□□□□ 0.16
GTF3A-205ENST00000466776 NFIXQ14938 502 aa16.05■□□□□ 0.16
GTF3A-205ENST00000466776 WDR90Q96KV7 1748 aa16.05■□□□□ 0.16
GTF3A-205ENST00000466776 SERPINB2P05120 415 aa16.04■□□□□ 0.16
GTF3A-205ENST00000466776 NMRK2Q9NPI5 230 aa16.04■□□□□ 0.16
GTF3A-205ENST00000466776 HEG1Q9ULI3 1381 aa16.03■□□□□ 0.16
GTF3A-205ENST00000466776 TIAM2Q8IVF5 1701 aa16.03■□□□□ 0.16
GTF3A-205ENST00000466776 ZC3H4Q9UPT8 1303 aaKnown RBP16.03■□□□□ 0.16
GTF3A-205ENST00000466776 ZNF790Q6PG37 636 aa16.03■□□□□ 0.16
GTF3A-205ENST00000466776 RBM46Q8TBY0 533 aaKnown RBP16.03■□□□□ 0.16
GTF3A-205ENST00000466776 CACNA1SQ13698 1873 aa16.02■□□□□ 0.16
GTF3A-205ENST00000466776 FMNL2Q96PY5 1086 aa16.02■□□□□ 0.16
GTF3A-205ENST00000466776 PDZRN3Q9UPQ7 1066 aa16.02■□□□□ 0.16
GTF3A-205ENST00000466776 NUDCQ9Y266 331 aa16.02■□□□□ 0.16
GTF3A-205ENST00000466776 DICER1Q9UPY3 1922 aaKnown RBP16.02■□□□□ 0.15
GTF3A-205ENST00000466776 ANKRD31Q8N7Z5 1873 aa16.01■□□□□ 0.15
GTF3A-205ENST00000466776 BCORQ6W2J9 1755 aa16.01■□□□□ 0.15
GTF3A-205ENST00000466776 H0YIN7 160 aa16.01■□□□□ 0.15
GTF3A-205ENST00000466776 EIF5P55010 431 aaKnown RBP16.01■□□□□ 0.15
GTF3A-205ENST00000466776 TTLL6Q8N841 843 aa16.01■□□□□ 0.15
GTF3A-205ENST00000466776 ZNF496Q96IT1 587 aaPredicted RBP16.01■□□□□ 0.15
GTF3A-205ENST00000466776 ZNF330Q9Y3S2 320 aaPredicted RBP16.01■□□□□ 0.15
GTF3A-205ENST00000466776 IL6STP40189 918 aaPredicted RBP16■□□□□ 0.15
GTF3A-205ENST00000466776 IFFO2Q5TF58 517 aa16■□□□□ 0.15
GTF3A-205ENST00000466776 BICDL1Q6ZP65 573 aa16■□□□□ 0.15
GTF3A-205ENST00000466776 C2CD5Q86YS7 1000 aa16■□□□□ 0.15
GTF3A-205ENST00000466776 IL17REQ8NFR9 667 aa16■□□□□ 0.15
GTF3A-205ENST00000466776 BCL2L12Q9HB09 334 aa16■□□□□ 0.15
GTF3A-205ENST00000466776 CARMIL3Q8ND23 1372 aa16■□□□□ 0.15
GTF3A-205ENST00000466776 NPHP1O15259 732 aa15.99■□□□□ 0.15
GTF3A-205ENST00000466776 LMNB1P20700 586 aa15.99■□□□□ 0.15
GTF3A-205ENST00000466776 FSTL1Q12841 308 aa15.99■□□□□ 0.15
GTF3A-205ENST00000466776 BTBD11A6QL63 1104 aa15.98■□□□□ 0.15
GTF3A-205ENST00000466776 PRKAR2BP31323 418 aa15.98■□□□□ 0.15
GTF3A-205ENST00000466776 PDE6BP35913 854 aa15.98■□□□□ 0.15
GTF3A-205ENST00000466776 FER1L6Q2WGJ9 1857 aa15.98■□□□□ 0.15
GTF3A-205ENST00000466776 RTF1Q92541 710 aaKnown RBP15.98■□□□□ 0.15
GTF3A-205ENST00000466776 CEMIPQ8WUJ3 1361 aa15.98■□□□□ 0.15
GTF3A-205ENST00000466776 ARFGEF2Q9Y6D5 1785 aa15.98■□□□□ 0.15
GTF3A-205ENST00000466776 COL11A2P13942 1736 aaPredicted RBP15.97■□□□□ 0.15
GTF3A-205ENST00000466776 RASSF7Q02833 373 aa15.97■□□□□ 0.15
GTF3A-205ENST00000466776 TBC1D9BQ66K14 1250 aa15.96■□□□□ 0.15
GTF3A-205ENST00000466776 BRIP1Q9BX63 1249 aa15.96■□□□□ 0.15
GTF3A-205ENST00000466776 RSPH6AQ9H0K4 717 aa15.96■□□□□ 0.15
GTF3A-205ENST00000466776 RRAGCQ9HB90 399 aa15.96■□□□□ 0.15
GTF3A-205ENST00000466776 TBC1D2BQ9UPU7 963 aa15.96■□□□□ 0.15
GTF3A-205ENST00000466776 U2AF1L5P0DN76 240 aaPredicted RBP15.95■□□□□ 0.14
GTF3A-205ENST00000466776 ST5P78524 1137 aa15.95■□□□□ 0.14
GTF3A-205ENST00000466776 U2AF1Q01081 240 aaKnown RBP eCLIP15.95■□□□□ 0.14
GTF3A-205ENST00000466776 CNBD1Q8NA66 436 aa15.95■□□□□ 0.14
GTF3A-205ENST00000466776 ZNF622Q969S3 477 aaKnown RBP eCLIP15.95■□□□□ 0.14
GTF3A-205ENST00000466776 SETDB2Q96T68 719 aa15.95■□□□□ 0.14
GTF3A-205ENST00000466776 DLG5Q8TDM6 1919 aa15.94■□□□□ 0.14
GTF3A-205ENST00000466776 NEFMP07197 916 aa15.94■□□□□ 0.14
GTF3A-205ENST00000466776 SMC1BQ8NDV3 1235 aa15.94■□□□□ 0.14
GTF3A-205ENST00000466776 ZNF652Q9Y2D9 606 aa15.94■□□□□ 0.14
GTF3A-205ENST00000466776 LAMB4A4D0S4 1761 aa15.94■□□□□ 0.14
GTF3A-205ENST00000466776 GLTPD2A6NH11 291 aa15.93■□□□□ 0.14
GTF3A-205ENST00000466776 PRR5LQ6MZQ0 368 aa15.93■□□□□ 0.14
GTF3A-205ENST00000466776 DZIP3Q86Y13 1208 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms