RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 AKT1S1Q96B36 256 aa20.72■□□□□ 0.91
GPC1-207ENST00000466624 NBPF14Q5TI25 921 aa20.71■□□□□ 0.91
GPC1-207ENST00000466624 CDCA7LQ96GN5 454 aa20.71■□□□□ 0.91
GPC1-207ENST00000466624 USP16Q9Y5T5 823 aa20.71■□□□□ 0.91
GPC1-207ENST00000466624 PRAMEF22A3QJZ6 481 aa20.7■□□□□ 0.9
GPC1-207ENST00000466624 CRKLP46109 303 aaKnown RBP20.7■□□□□ 0.9
GPC1-207ENST00000466624 KRT24Q2M2I5 525 aa20.7■□□□□ 0.9
GPC1-207ENST00000466624 DUSP27Q5VZP5 1158 aa20.7■□□□□ 0.9
GPC1-207ENST00000466624 CHMP4AQ9BY43 222 aa20.7■□□□□ 0.9
GPC1-207ENST00000466624 CACNA1FO60840 1977 aa20.69■□□□□ 0.9
GPC1-207ENST00000466624 C8orf58Q8NAV2 365 aa20.69■□□□□ 0.9
GPC1-207ENST00000466624 ANO8Q9HCE9 1232 aaPredicted RBP20.69■□□□□ 0.9
GPC1-207ENST00000466624 CCDC87Q9NVE4 849 aa20.69■□□□□ 0.9
GPC1-207ENST00000466624 STK32BQ9NY57 414 aa20.69■□□□□ 0.9
GPC1-207ENST00000466624 ERBB4Q15303 1308 aa20.69■□□□□ 0.9
GPC1-207ENST00000466624 EXOSC9Q06265 439 aaKnown RBP20.68■□□□□ 0.9
GPC1-207ENST00000466624 SLC15A2Q16348 729 aa20.68■□□□□ 0.9
GPC1-207ENST00000466624 ZNF827Q17R98 1081 aa20.68■□□□□ 0.9
GPC1-207ENST00000466624 AK7Q96M32 723 aa20.68■□□□□ 0.9
GPC1-207ENST00000466624 TWISTNBQ3B726 338 aaPredicted RBP20.67■□□□□ 0.9
GPC1-207ENST00000466624 INTS5Q6P9B9 1019 aaKnown RBP20.67■□□□□ 0.9
GPC1-207ENST00000466624 RPS6KA4O75676 772 aa20.66■□□□□ 0.9
GPC1-207ENST00000466624 TSPYL6Q8N831 410 aa20.66■□□□□ 0.9
GPC1-207ENST00000466624 SSFA2P28290 1259 aa20.65■□□□□ 0.9
GPC1-207ENST00000466624 HDGFL1Q5TGJ6 251 aa20.65■□□□□ 0.9
GPC1-207ENST00000466624 ZBTB1Q9Y2K1 713 aa20.65■□□□□ 0.9
GPC1-207ENST00000466624 C4AP0C0L4 1744 aa20.64■□□□□ 0.9
GPC1-207ENST00000466624 ELL2O00472 640 aaPredicted RBP20.64■□□□□ 0.89
GPC1-207ENST00000466624 GNPATO15228 680 aa20.64■□□□□ 0.89
GPC1-207ENST00000466624 CT47B1P0C2W7 299 aaPredicted RBP20.64■□□□□ 0.89
GPC1-207ENST00000466624 ADRA2BP18089 450 aa20.64■□□□□ 0.89
GPC1-207ENST00000466624 IL6STP40189 918 aaPredicted RBP20.64■□□□□ 0.89
GPC1-207ENST00000466624 FLAD1Q8NFF5 587 aa20.64■□□□□ 0.89
GPC1-207ENST00000466624 TFCP2L1Q9NZI6 479 aa20.64■□□□□ 0.89
GPC1-207ENST00000466624 RTCBQ9Y3I0 505 aaKnown RBP20.64■□□□□ 0.89
GPC1-207ENST00000466624 VAMP4O75379 141 aa20.63■□□□□ 0.89
GPC1-207ENST00000466624 A1BGP04217 495 aa20.63■□□□□ 0.89
GPC1-207ENST00000466624 EIF2S2P20042 333 aaKnown RBP20.63■□□□□ 0.89
GPC1-207ENST00000466624 YTHDC1Q96MU7 727 aaKnown RBP20.63■□□□□ 0.89
GPC1-207ENST00000466624 CASZ1Q86V15 1759 aa20.62■□□□□ 0.89
GPC1-207ENST00000466624 CCDC30Q5VVM6 783 aa20.62■□□□□ 0.89
GPC1-207ENST00000466624 ZNF428Q96B54 188 aa20.62■□□□□ 0.89
GPC1-207ENST00000466624 PNPLA7Q6ZV29 1317 aa20.61■□□□□ 0.89
GPC1-207ENST00000466624 NBPF26B4DH59 902 aa20.61■□□□□ 0.89
GPC1-207ENST00000466624 EIF5P55010 431 aaKnown RBP20.61■□□□□ 0.89
GPC1-207ENST00000466624 NBPF10Q6P3W6 841 aaKnown RBP20.61■□□□□ 0.89
GPC1-207ENST00000466624 NBPF15Q8N660 670 aa20.61■□□□□ 0.89
GPC1-207ENST00000466624 DDX21Q9NR30 783 aaKnown RBP eCLIP20.61■□□□□ 0.89
GPC1-207ENST00000466624 DBF4Q9UBU7 674 aaPredicted RBP20.61■□□□□ 0.89
GPC1-207ENST00000466624 COL15A1P39059 1388 aa20.6■□□□□ 0.89
GPC1-207ENST00000466624 CANXP27824 592 aaKnown RBP20.6■□□□□ 0.89
GPC1-207ENST00000466624 PDIA6Q15084 440 aa20.6■□□□□ 0.89
GPC1-207ENST00000466624 BCORQ6W2J9 1755 aa20.59■□□□□ 0.89
GPC1-207ENST00000466624 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.59■□□□□ 0.89
GPC1-207ENST00000466624 TRAPPC3LQ5T215 181 aa20.59■□□□□ 0.89
GPC1-207ENST00000466624 AMIGO3Q86WK7 504 aa20.59■□□□□ 0.89
GPC1-207ENST00000466624 SCN7AQ01118 1682 aa20.58■□□□□ 0.89
GPC1-207ENST00000466624 A0A087WZG4 1122 aa20.58■□□□□ 0.89
GPC1-207ENST00000466624 LRP10Q7Z4F1 713 aa20.58■□□□□ 0.89
GPC1-207ENST00000466624 CHPF2Q9P2E5 772 aa20.58■□□□□ 0.89
GPC1-207ENST00000466624 R3HDM1Q15032 1099 aaKnown RBP20.57■□□□□ 0.88
GPC1-207ENST00000466624 NPM2Q86SE8 214 aaKnown RBP20.57■□□□□ 0.88
GPC1-207ENST00000466624 NECTIN2Q92692 538 aa20.57■□□□□ 0.88
GPC1-207ENST00000466624 STK31Q9BXU1 1019 aa20.57■□□□□ 0.88
GPC1-207ENST00000466624 HYPKQ9NX55 129 aa20.57■□□□□ 0.88
GPC1-207ENST00000466624 PHF14O94880 888 aa20.56■□□□□ 0.88
GPC1-207ENST00000466624 PIP4K2AP48426 406 aaPredicted RBP20.56■□□□□ 0.88
GPC1-207ENST00000466624 COL23A1Q86Y22 540 aaPredicted RBP20.56■□□□□ 0.88
GPC1-207ENST00000466624 ARHGEF1Q92888 912 aaKnown RBP20.56■□□□□ 0.88
GPC1-207ENST00000466624 COL24A1Q17RW2 1714 aa20.56■□□□□ 0.88
GPC1-207ENST00000466624 MYL6BP14649 208 aa20.55■□□□□ 0.88
GPC1-207ENST00000466624 PROSER3Q2NL68 480 aa20.55■□□□□ 0.88
GPC1-207ENST00000466624 RGL2O15211 777 aa20.54■□□□□ 0.88
GPC1-207ENST00000466624 RFC4P35249 363 aa20.54■□□□□ 0.88
GPC1-207ENST00000466624 ALDH1L2Q3SY69 923 aa20.54■□□□□ 0.88
GPC1-207ENST00000466624 SLC16A10Q8TF71 515 aa20.54■□□□□ 0.88
GPC1-207ENST00000466624 USP42Q9H9J4 1324 aaKnown RBP20.53■□□□□ 0.88
GPC1-207ENST00000466624 NARFQ9UHQ1 456 aa20.53■□□□□ 0.88
GPC1-207ENST00000466624 ZNF330Q9Y3S2 320 aaPredicted RBP20.53■□□□□ 0.88
GPC1-207ENST00000466624 NUP98P52948 1817 aa20.53■□□□□ 0.88
GPC1-207ENST00000466624 ANXA1P04083 346 aa20.52■□□□□ 0.88
GPC1-207ENST00000466624 SMIM5Q71RC9 77 aa20.52■□□□□ 0.88
GPC1-207ENST00000466624 DZIP3Q86Y13 1208 aaKnown RBP20.52■□□□□ 0.88
GPC1-207ENST00000466624 PSDA5PKW4 1024 aaPredicted RBP20.51■□□□□ 0.87
GPC1-207ENST00000466624 SLC4A2P04920 1241 aa20.51■□□□□ 0.87
GPC1-207ENST00000466624 ARFGEF2Q9Y6D5 1785 aa20.5■□□□□ 0.87
GPC1-207ENST00000466624 ZPR1O75312 459 aa20.5■□□□□ 0.87
GPC1-207ENST00000466624 COPS6Q7L5N1 327 aa20.5■□□□□ 0.87
GPC1-207ENST00000466624 XAGE3Q8WTP9 111 aa20.5■□□□□ 0.87
GPC1-207ENST00000466624 ANKRD36CQ5JPF3 1778 aa20.49■□□□□ 0.87
GPC1-207ENST00000466624 ERVV-1B6SEH8 477 aa20.49■□□□□ 0.87
GPC1-207ENST00000466624 MSH5O43196 834 aa20.49■□□□□ 0.87
GPC1-207ENST00000466624 CAMTA2O94983 1202 aa20.49■□□□□ 0.87
GPC1-207ENST00000466624 BRPF1P55201 1214 aaPredicted RBP20.49■□□□□ 0.87
GPC1-207ENST00000466624 KIF6Q6ZMV9 814 aa20.49■□□□□ 0.87
GPC1-207ENST00000466624 SSH1Q8WYL5 1049 aa20.49■□□□□ 0.87
GPC1-207ENST00000466624 TBC1D2BQ9UPU7 963 aa20.49■□□□□ 0.87
GPC1-207ENST00000466624 MAP3K15Q6ZN16 1313 aa20.49■□□□□ 0.87
GPC1-207ENST00000466624 TCERG1O14776 1098 aaKnown RBP20.48■□□□□ 0.87
GPC1-207ENST00000466624 GYS1P13807 737 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms