RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 RPS6KA4O75676 772 aa18.78■□□□□ 0.6
DNMT3A-208ENST00000466601 AMIGO3Q86WK7 504 aa18.78■□□□□ 0.6
DNMT3A-208ENST00000466601 TSR2Q969E8 191 aaKnown RBP18.78■□□□□ 0.6
DNMT3A-208ENST00000466601 RTCBQ9Y3I0 505 aaKnown RBP18.78■□□□□ 0.6
DNMT3A-208ENST00000466601 PHF14O94880 888 aa18.77■□□□□ 0.6
DNMT3A-208ENST00000466601 SSFA2P28290 1259 aa18.77■□□□□ 0.6
DNMT3A-208ENST00000466601 KRT24Q2M2I5 525 aa18.77■□□□□ 0.6
DNMT3A-208ENST00000466601 SMIM5Q71RC9 77 aa18.77■□□□□ 0.6
DNMT3A-208ENST00000466601 FLAD1Q8NFF5 587 aa18.77■□□□□ 0.6
DNMT3A-208ENST00000466601 ZBTB1Q9Y2K1 713 aa18.77■□□□□ 0.6
DNMT3A-208ENST00000466601 MYH14Q7Z406 1995 aaKnown RBP18.76■□□□□ 0.59
DNMT3A-208ENST00000466601 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.76■□□□□ 0.59
DNMT3A-208ENST00000466601 A1BGP04217 495 aa18.76■□□□□ 0.59
DNMT3A-208ENST00000466601 CANXP27824 592 aaKnown RBP18.76■□□□□ 0.59
DNMT3A-208ENST00000466601 HNRNPUQ00839 825 aaKnown RBP eCLIP18.76■□□□□ 0.59
DNMT3A-208ENST00000466601 COL23A1Q86Y22 540 aaPredicted RBP18.76■□□□□ 0.59
DNMT3A-208ENST00000466601 PDGFDQ9GZP0 370 aaPredicted RBP18.76■□□□□ 0.59
DNMT3A-208ENST00000466601 SPINK5Q9NQ38 1064 aaPredicted RBP18.76■□□□□ 0.59
DNMT3A-208ENST00000466601 MSH5O43196 834 aa18.75■□□□□ 0.59
DNMT3A-208ENST00000466601 GOLGA2Q08379 1002 aa18.75■□□□□ 0.59
DNMT3A-208ENST00000466601 TRAPPC3LQ5T215 181 aa18.75■□□□□ 0.59
DNMT3A-208ENST00000466601 QSER1Q2KHR3 1735 aa18.74■□□□□ 0.59
DNMT3A-208ENST00000466601 TUBGCP6Q96RT7 1819 aa18.74■□□□□ 0.59
DNMT3A-208ENST00000466601 UBR3Q6ZT12 1888 aa18.74■□□□□ 0.59
DNMT3A-208ENST00000466601 ADRA2BP18089 450 aa18.74■□□□□ 0.59
DNMT3A-208ENST00000466601 DUSP27Q5VZP5 1158 aa18.74■□□□□ 0.59
DNMT3A-208ENST00000466601 MYH16Q9H6N6 1097 aa18.74■□□□□ 0.59
DNMT3A-208ENST00000466601 SOS1Q07889 1333 aaPredicted RBP18.74■□□□□ 0.59
DNMT3A-208ENST00000466601 FANCIQ9NVI1 1328 aa18.74■□□□□ 0.59
DNMT3A-208ENST00000466601 HOXB7P09629 217 aa18.73■□□□□ 0.59
DNMT3A-208ENST00000466601 EIF2S2P20042 333 aaKnown RBP18.73■□□□□ 0.59
DNMT3A-208ENST00000466601 ARHGEF1Q92888 912 aaKnown RBP18.73■□□□□ 0.59
DNMT3A-208ENST00000466601 ELL2O00472 640 aaPredicted RBP18.72■□□□□ 0.59
DNMT3A-208ENST00000466601 C8orf58Q8NAV2 365 aa18.72■□□□□ 0.59
DNMT3A-208ENST00000466601 LAMB4A4D0S4 1761 aa18.71■□□□□ 0.59
DNMT3A-208ENST00000466601 E9PSI1 815 aa18.71■□□□□ 0.59
DNMT3A-208ENST00000466601 IL6STP40189 918 aaPredicted RBP18.71■□□□□ 0.59
DNMT3A-208ENST00000466601 PIP4K2AP48426 406 aaPredicted RBP18.71■□□□□ 0.59
DNMT3A-208ENST00000466601 EIF5P55010 431 aaKnown RBP18.71■□□□□ 0.59
DNMT3A-208ENST00000466601 SLC16A10Q8TF71 515 aa18.71■□□□□ 0.59
DNMT3A-208ENST00000466601 NBPF26B4DH59 902 aa18.7■□□□□ 0.58
DNMT3A-208ENST00000466601 RFC4P35249 363 aa18.7■□□□□ 0.58
DNMT3A-208ENST00000466601 SLFN5Q08AF3 891 aa18.7■□□□□ 0.58
DNMT3A-208ENST00000466601 NBPF10Q6P3W6 841 aaKnown RBP18.7■□□□□ 0.58
DNMT3A-208ENST00000466601 NBPF15Q8N660 670 aa18.7■□□□□ 0.58
DNMT3A-208ENST00000466601 TSPYL6Q8N831 410 aa18.7■□□□□ 0.58
DNMT3A-208ENST00000466601 NECTIN2Q92692 538 aa18.7■□□□□ 0.58
DNMT3A-208ENST00000466601 CDCA7LQ96GN5 454 aa18.7■□□□□ 0.58
DNMT3A-208ENST00000466601 ZNF330Q9Y3S2 320 aaPredicted RBP18.7■□□□□ 0.58
DNMT3A-208ENST00000466601 CASZ1Q86V15 1759 aa18.7■□□□□ 0.58
DNMT3A-208ENST00000466601 ERBB4Q15303 1308 aa18.7■□□□□ 0.58
DNMT3A-208ENST00000466601 COL15A1P39059 1388 aa18.69■□□□□ 0.58
DNMT3A-208ENST00000466601 ZBTB7AO95365 584 aa18.69■□□□□ 0.58
DNMT3A-208ENST00000466601 HDGFL1Q5TGJ6 251 aa18.69■□□□□ 0.58
DNMT3A-208ENST00000466601 NPM2Q86SE8 214 aaKnown RBP18.69■□□□□ 0.58
DNMT3A-208ENST00000466601 A0A087WZG4 1122 aa18.68■□□□□ 0.58
DNMT3A-208ENST00000466601 EXOSC9Q06265 439 aaKnown RBP18.68■□□□□ 0.58
DNMT3A-208ENST00000466601 TWISTNBQ3B726 338 aaPredicted RBP18.68■□□□□ 0.58
DNMT3A-208ENST00000466601 MTFR1LQ9H019 292 aa18.68■□□□□ 0.58
DNMT3A-208ENST00000466601 MYL6BP14649 208 aa18.67■□□□□ 0.58
DNMT3A-208ENST00000466601 ATF5Q9Y2D1 282 aaPredicted RBP18.67■□□□□ 0.58
DNMT3A-208ENST00000466601 ZPR1O75312 459 aa18.66■□□□□ 0.58
DNMT3A-208ENST00000466601 PDIA6Q15084 440 aa18.66■□□□□ 0.58
DNMT3A-208ENST00000466601 ARXQ96QS3 562 aa18.66■□□□□ 0.58
DNMT3A-208ENST00000466601 CHMP4AQ9BY43 222 aa18.66■□□□□ 0.58
DNMT3A-208ENST00000466601 SRP68Q9UHB9 627 aaKnown RBP18.66■□□□□ 0.58
DNMT3A-208ENST00000466601 NARFQ9UHQ1 456 aa18.66■□□□□ 0.58
DNMT3A-208ENST00000466601 USP42Q9H9J4 1324 aaKnown RBP18.66■□□□□ 0.58
DNMT3A-208ENST00000466601 TRMT2AQ8IZ69 625 aaKnown RBP18.65■□□□□ 0.58
DNMT3A-208ENST00000466601 SPON1Q9HCB6 807 aa18.65■□□□□ 0.58
DNMT3A-208ENST00000466601 DDX21Q9NR30 783 aaKnown RBP eCLIP18.65■□□□□ 0.58
DNMT3A-208ENST00000466601 CHPF2Q9P2E5 772 aa18.65■□□□□ 0.58
DNMT3A-208ENST00000466601 TBC1D2BQ9UPU7 963 aa18.65■□□□□ 0.58
DNMT3A-208ENST00000466601 ZBED9Q6R2W3 1325 aa18.65■□□□□ 0.58
DNMT3A-208ENST00000466601 VAMP4O75379 141 aa18.64■□□□□ 0.57
DNMT3A-208ENST00000466601 ANXA1P04083 346 aa18.64■□□□□ 0.57
DNMT3A-208ENST00000466601 GYS1P13807 737 aa18.64■□□□□ 0.57
DNMT3A-208ENST00000466601 PROSER3Q2NL68 480 aa18.64■□□□□ 0.57
DNMT3A-208ENST00000466601 CCDC30Q5VVM6 783 aa18.64■□□□□ 0.57
DNMT3A-208ENST00000466601 USPL1Q5W0Q7 1092 aa18.64■□□□□ 0.57
DNMT3A-208ENST00000466601 MSL1Q68DK7 614 aa18.64■□□□□ 0.57
DNMT3A-208ENST00000466601 DZIP3Q86Y13 1208 aaKnown RBP18.64■□□□□ 0.57
DNMT3A-208ENST00000466601 DBF4Q9UBU7 674 aaPredicted RBP18.64■□□□□ 0.57
DNMT3A-208ENST00000466601 LRP10Q7Z4F1 713 aa18.63■□□□□ 0.57
DNMT3A-208ENST00000466601 C4AP0C0L4 1744 aa18.63■□□□□ 0.57
DNMT3A-208ENST00000466601 NLGN1Q8N2Q7 840 aa18.62■□□□□ 0.57
DNMT3A-208ENST00000466601 CAMTA2O94983 1202 aa18.61■□□□□ 0.57
DNMT3A-208ENST00000466601 BCL2L12Q9HB09 334 aa18.61■□□□□ 0.57
DNMT3A-208ENST00000466601 HYPKQ9NX55 129 aa18.61■□□□□ 0.57
DNMT3A-208ENST00000466601 TCERG1O14776 1098 aaKnown RBP18.6■□□□□ 0.57
DNMT3A-208ENST00000466601 PTGER2P43116 358 aa18.6■□□□□ 0.57
DNMT3A-208ENST00000466601 FKBP8Q14318 412 aa18.6■□□□□ 0.57
DNMT3A-208ENST00000466601 TTLL7Q6ZT98 887 aa18.6■□□□□ 0.57
DNMT3A-208ENST00000466601 SGIP1Q9BQI5 828 aa18.6■□□□□ 0.57
DNMT3A-208ENST00000466601 STK31Q9BXU1 1019 aa18.6■□□□□ 0.57
DNMT3A-208ENST00000466601 POLD1P28340 1107 aa18.59■□□□□ 0.57
DNMT3A-208ENST00000466601 AIMP1Q12904 312 aaKnown RBP18.59■□□□□ 0.57
DNMT3A-208ENST00000466601 KIF6Q6ZMV9 814 aa18.59■□□□□ 0.57
DNMT3A-208ENST00000466601 COPS6Q7L5N1 327 aa18.59■□□□□ 0.57
DNMT3A-208ENST00000466601 XAGE3Q8WTP9 111 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 745 ms