RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 A2MP01023 1474 aa5.02□□□□□ -1.61
SORT1-202ENST00000466471 LILRB3O75022 631 aa5.02□□□□□ -1.61
SORT1-202ENST00000466471 KDM4AO75164 1064 aa5.02□□□□□ -1.61
SORT1-202ENST00000466471 SNRPBP14678 240 aaKnown RBP5.02□□□□□ -1.61
SORT1-202ENST00000466471 B4GALNT3Q6L9W6 998 aa5.02□□□□□ -1.61
SORT1-202ENST00000466471 RSBN1LQ6PCB5 846 aaPredicted RBP5.02□□□□□ -1.61
SORT1-202ENST00000466471 SPIRE2Q8WWL2 714 aa5.02□□□□□ -1.61
SORT1-202ENST00000466471 USB1Q9BQ65 265 aaKnown RBP5.02□□□□□ -1.61
SORT1-202ENST00000466471 ATP13A2Q9NQ11 1180 aa5.02□□□□□ -1.61
SORT1-202ENST00000466471 LIMD1Q9UGP4 676 aa5.02□□□□□ -1.61
SORT1-202ENST00000466471 DISP2A7MBM2 1401 aa5.02□□□□□ -1.61
SORT1-202ENST00000466471 TNS1Q9HBL0 1735 aaKnown RBP5.02□□□□□ -1.61
SORT1-202ENST00000466471 MARF1Q9Y4F3 1742 aaKnown RBP5.02□□□□□ -1.61
SORT1-202ENST00000466471 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.01□□□□□ -1.61
SORT1-202ENST00000466471 GLI3P10071 1580 aa5.01□□□□□ -1.61
SORT1-202ENST00000466471 GIGYF1O75420 1035 aaPredicted RBP5.01□□□□□ -1.61
SORT1-202ENST00000466471 DXOO77932 396 aaKnown RBP5.01□□□□□ -1.61
SORT1-202ENST00000466471 ABL2P42684 1182 aa5.01□□□□□ -1.61
SORT1-202ENST00000466471 SRPK2P78362 688 aaKnown RBP5.01□□□□□ -1.61
SORT1-202ENST00000466471 NFX1Q12986 1120 aaKnown RBP5.01□□□□□ -1.61
SORT1-202ENST00000466471 FAM9AQ8IZU1 332 aaPredicted RBP5.01□□□□□ -1.61
SORT1-202ENST00000466471 HPS1Q92902 700 aa5.01□□□□□ -1.61
SORT1-202ENST00000466471 C8orf37Q96NL8 207 aa5.01□□□□□ -1.61
SORT1-202ENST00000466471 RREB1Q92766 1687 aa5.01□□□□□ -1.61
SORT1-202ENST00000466471 CHD2O14647 1828 aaKnown RBP5□□□□□ -1.61
SORT1-202ENST00000466471 TET3O43151 1660 aa5□□□□□ -1.61
SORT1-202ENST00000466471 USP46P62068 366 aa5□□□□□ -1.61
SORT1-202ENST00000466471 SKOR1P84550 965 aa5□□□□□ -1.61
SORT1-202ENST00000466471 GUCA2AQ02747 115 aa5□□□□□ -1.61
SORT1-202ENST00000466471 CCDC27Q2M243 656 aa5□□□□□ -1.61
SORT1-202ENST00000466471 RC3H1Q5TC82 1133 aaKnown RBP5□□□□□ -1.61
SORT1-202ENST00000466471 SND1Q7KZF4 910 aaKnown RBP eCLIP5□□□□□ -1.614e-7■■■■■ 29.4
SORT1-202ENST00000466471 NUTM1Q86Y26 1132 aa5□□□□□ -1.61
SORT1-202ENST00000466471 SYMPKQ92797 1274 aaKnown RBP5□□□□□ -1.61
SORT1-202ENST00000466471 TRPC5Q9UL62 973 aaPredicted RBP5□□□□□ -1.61
SORT1-202ENST00000466471 ASXL1Q8IXJ9 1541 aa5□□□□□ -1.61
SORT1-202ENST00000466471 LAMC1P11047 1609 aa5□□□□□ -1.61
SORT1-202ENST00000466471 PNPLA6Q8IY17 1366 aa5□□□□□ -1.61
SORT1-202ENST00000466471 NCOA3Q9Y6Q9 1424 aa4.99□□□□□ -1.61
SORT1-202ENST00000466471 COL22A1Q8NFW1 1626 aaPredicted RBP4.99□□□□□ -1.61
SORT1-202ENST00000466471 ATG7O95352 703 aa4.99□□□□□ -1.61
SORT1-202ENST00000466471 USP17L8P0C7I0 530 aa4.99□□□□□ -1.61
SORT1-202ENST00000466471 ERCC3P19447 782 aa4.99□□□□□ -1.61
SORT1-202ENST00000466471 CFAP70Q5T0N1 1121 aa4.99□□□□□ -1.61
SORT1-202ENST00000466471 FBXO31Q5XUX0 539 aaPredicted RBP4.99□□□□□ -1.61
SORT1-202ENST00000466471 TBC1D2BQ9UPU7 963 aa4.99□□□□□ -1.61
SORT1-202ENST00000466471 GNEQ9Y223 722 aaKnown RBP4.99□□□□□ -1.61
SORT1-202ENST00000466471 PTCH1Q13635 1447 aa4.98□□□□□ -1.61
SORT1-202ENST00000466471 NUP188Q5SRE5 1749 aa4.98□□□□□ -1.61
SORT1-202ENST00000466471 CDC42BPAQ5VT25 1732 aa4.98□□□□□ -1.61
SORT1-202ENST00000466471 POM121CA8CG34 1229 aa4.98□□□□□ -1.61
SORT1-202ENST00000466471 HOXA2O43364 376 aa4.98□□□□□ -1.61
SORT1-202ENST00000466471 ALDH1A1P00352 501 aa4.98□□□□□ -1.61
SORT1-202ENST00000466471 KCNA6P17658 529 aa4.98□□□□□ -1.61
SORT1-202ENST00000466471 RBM25P49756 843 aaKnown RBP4.98□□□□□ -1.61
SORT1-202ENST00000466471 SF3B2Q13435 895 aaKnown RBP4.98□□□□□ -1.61
SORT1-202ENST00000466471 R3HDM1Q15032 1099 aaKnown RBP4.98□□□□□ -1.61
SORT1-202ENST00000466471 LCE2CQ5TA81 110 aa4.98□□□□□ -1.61
SORT1-202ENST00000466471 DIEXFQ68CQ4 756 aaKnown RBP4.98□□□□□ -1.61
SORT1-202ENST00000466471 TRIM47Q96LD4 638 aa4.98□□□□□ -1.61
SORT1-202ENST00000466471 PPP1R12CQ9BZL4 782 aa4.98□□□□□ -1.61
SORT1-202ENST00000466471 ZBTB3Q9H5J0 574 aa4.98□□□□□ -1.61
SORT1-202ENST00000466471 ARHGAP35Q9NRY4 1499 aa4.98□□□□□ -1.61
SORT1-202ENST00000466471 SYCP2Q9BX26 1530 aa4.97□□□□□ -1.61
SORT1-202ENST00000466471 ADGRB2O60241 1585 aa4.97□□□□□ -1.61
SORT1-202ENST00000466471 ERVK-7P63135 1459 aa4.97□□□□□ -1.61
SORT1-202ENST00000466471 TERTO14746 1132 aaKnown RBP4.97□□□□□ -1.61
SORT1-202ENST00000466471 COL13A1Q5TAT6 717 aaPredicted RBP4.97□□□□□ -1.61
SORT1-202ENST00000466471 HDGFL1Q5TGJ6 251 aa4.97□□□□□ -1.61
SORT1-202ENST00000466471 GJD4Q96KN9 370 aaPredicted RBP4.97□□□□□ -1.61
SORT1-202ENST00000466471 SENP2Q9HC62 589 aa4.97□□□□□ -1.61
SORT1-202ENST00000466471 NRKQ7Z2Y5 1582 aa4.96□□□□□ -1.62
SORT1-202ENST00000466471 AP1G2O75843 785 aa4.96□□□□□ -1.62
SORT1-202ENST00000466471 HSPA6P17066 643 aa4.96□□□□□ -1.62
SORT1-202ENST00000466471 JUNDP17535 347 aa4.96□□□□□ -1.62
SORT1-202ENST00000466471 LTKP29376 864 aa4.96□□□□□ -1.62
SORT1-202ENST00000466471 BAG6P46379 1132 aa4.96□□□□□ -1.62
SORT1-202ENST00000466471 WNT7BP56706 349 aa4.96□□□□□ -1.62
SORT1-202ENST00000466471 ELOAQ14241 798 aaKnown RBP4.96□□□□□ -1.62
SORT1-202ENST00000466471 FOXD4L5Q5VV16 416 aaPredicted RBP4.96□□□□□ -1.62
SORT1-202ENST00000466471 PTCRAQ6ISU1 281 aaPredicted RBP4.96□□□□□ -1.62
SORT1-202ENST00000466471 FOXD4L4Q8WXT5 416 aaPredicted RBP4.96□□□□□ -1.62
SORT1-202ENST00000466471 ALG2Q9H553 416 aa4.96□□□□□ -1.62
SORT1-202ENST00000466471 STK17AQ9UEE5 414 aa4.96□□□□□ -1.62
SORT1-202ENST00000466471 USP21Q9UK80 565 aa4.96□□□□□ -1.62
SORT1-202ENST00000466471 MYOM1P52179 1685 aa4.96□□□□□ -1.62
SORT1-202ENST00000466471 PRXQ9BXM0 1461 aa4.95□□□□□ -1.62
SORT1-202ENST00000466471 MOXD2PA6NHM9 499 aa4.95□□□□□ -1.62
SORT1-202ENST00000466471 WIPF1O43516 503 aa4.95□□□□□ -1.62
SORT1-202ENST00000466471 HMGB1P09429 215 aaKnown RBP4.95□□□□□ -1.62
SORT1-202ENST00000466471 GGT6Q6P531 493 aa4.95□□□□□ -1.62
SORT1-202ENST00000466471 TNS4Q8IZW8 715 aa4.95□□□□□ -1.62
SORT1-202ENST00000466471 HELBQ8NG08 1087 aaPredicted RBP4.95□□□□□ -1.62
SORT1-202ENST00000466471 VRTNQ9H8Y1 702 aa4.95□□□□□ -1.62
SORT1-202ENST00000466471 CASZ1Q86V15 1759 aa4.95□□□□□ -1.62
SORT1-202ENST00000466471 DCCP43146 1447 aa4.95□□□□□ -1.62
SORT1-202ENST00000466471 TROQ12816 1431 aaPredicted RBP4.95□□□□□ -1.62
SORT1-202ENST00000466471 CROCC2H7BZ55 1655 aa4.95□□□□□ -1.62
SORT1-202ENST00000466471 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.94□□□□□ -1.62
SORT1-202ENST00000466471 PALM3A6NDB9 673 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms