RNA–Protein interactions for RNA: ENST00000463943.1

BCAS4-204, Transcript of breast carcinoma amplified sequence 4, humanhuman

TSL 1 (best)

Gene BCAS4, Length 1,498 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4-204ENST00000463943 SNRPA1P09661 255 aaKnown RBP25.4■■□□□ 1.66
BCAS4-204ENST00000463943 CCDC27Q2M243 656 aa25.4■■□□□ 1.66
BCAS4-204ENST00000463943 TEX13AQ9BXU3 409 aaPredicted RBP25.4■■□□□ 1.66
BCAS4-204ENST00000463943 BABAM1Q9NWV8 329 aa25.4■■□□□ 1.66
BCAS4-204ENST00000463943 ZBTB1Q9Y2K1 713 aa25.4■■□□□ 1.66
BCAS4-204ENST00000463943 STARD3NLO95772 234 aa25.4■■□□□ 1.66
BCAS4-204ENST00000463943 FLAD1Q8NFF5 587 aa25.4■■□□□ 1.66
BCAS4-204ENST00000463943 CFAP44Q96MT7 982 aa25.4■■□□□ 1.66
BCAS4-204ENST00000463943 ATF5Q9Y2D1 282 aaPredicted RBP25.39■■□□□ 1.65
BCAS4-204ENST00000463943 GIGYF1O75420 1035 aaPredicted RBP25.37■■□□□ 1.65
BCAS4-204ENST00000463943 CANXP27824 592 aaKnown RBP25.37■■□□□ 1.65
BCAS4-204ENST00000463943 CALD1Q05682 793 aaKnown RBP25.37■■□□□ 1.65
BCAS4-204ENST00000463943 TRAPPC3LQ5T215 181 aa25.37■■□□□ 1.65
BCAS4-204ENST00000463943 MTFR1LQ9H019 292 aa25.37■■□□□ 1.65
BCAS4-204ENST00000463943 A1BGP04217 495 aa25.36■■□□□ 1.65
BCAS4-204ENST00000463943 ZNF853P0CG23 659 aa25.36■■□□□ 1.65
BCAS4-204ENST00000463943 NCBP3Q53F19 620 aaKnown RBP25.36■■□□□ 1.65
BCAS4-204ENST00000463943 ARHGEF1Q92888 912 aaKnown RBP25.36■■□□□ 1.65
BCAS4-204ENST00000463943 SPON1Q9HCB6 807 aa25.36■■□□□ 1.65
BCAS4-204ENST00000463943 MBIPQ9NS73 344 aa25.36■■□□□ 1.65
BCAS4-204ENST00000463943 SLC16A10Q8TF71 515 aa25.35■■□□□ 1.65
BCAS4-204ENST00000463943 IFT57Q9NWB7 429 aa25.35■■□□□ 1.65
BCAS4-204ENST00000463943 C4AP0C0L4 1744 aa25.35■■□□□ 1.65
BCAS4-204ENST00000463943 LAMB4A4D0S4 1761 aa25.35■■□□□ 1.65
BCAS4-204ENST00000463943 PIP4K2AP48426 406 aaPredicted RBP25.34■■□□□ 1.65
BCAS4-204ENST00000463943 GNAI1P63096 354 aa25.34■■□□□ 1.65
BCAS4-204ENST00000463943 KRT24Q2M2I5 525 aa25.34■■□□□ 1.65
BCAS4-204ENST00000463943 LRP5O75197 1615 aa25.34■■□□□ 1.65
BCAS4-204ENST00000463943 SOS1Q07889 1333 aaPredicted RBP25.34■■□□□ 1.65
BCAS4-204ENST00000463943 MSL1Q68DK7 614 aa25.34■■□□□ 1.65
BCAS4-204ENST00000463943 ADRA2BP18089 450 aa25.33■■□□□ 1.65
BCAS4-204ENST00000463943 ZNF330Q9Y3S2 320 aaPredicted RBP25.33■■□□□ 1.65
BCAS4-204ENST00000463943 COL15A1P39059 1388 aa25.32■■□□□ 1.64
BCAS4-204ENST00000463943 RFC4P35249 363 aa25.32■■□□□ 1.64
BCAS4-204ENST00000463943 PTGER2P43116 358 aa25.31■■□□□ 1.64
BCAS4-204ENST00000463943 EIF5P55010 431 aaKnown RBP25.29■■□□□ 1.64
BCAS4-204ENST00000463943 TSR2Q969E8 191 aaKnown RBP25.29■■□□□ 1.64
BCAS4-204ENST00000463943 SRP68Q9UHB9 627 aaKnown RBP25.29■■□□□ 1.64
BCAS4-204ENST00000463943 NGEFQ8N5V2 710 aa25.28■■□□□ 1.64
BCAS4-204ENST00000463943 SGIP1Q9BQI5 828 aa25.28■■□□□ 1.64
BCAS4-204ENST00000463943 EIF2S2P20042 333 aaKnown RBP25.28■■□□□ 1.64
BCAS4-204ENST00000463943 IL6STP40189 918 aaPredicted RBP25.28■■□□□ 1.64
BCAS4-204ENST00000463943 WDR63Q8IWG1 891 aa25.28■■□□□ 1.64
BCAS4-204ENST00000463943 IL16Q14005 1332 aa25.27■■□□□ 1.64
BCAS4-204ENST00000463943 COL24A1Q17RW2 1714 aa25.27■■□□□ 1.64
BCAS4-204ENST00000463943 NBPF26B4DH59 902 aa25.27■■□□□ 1.64
BCAS4-204ENST00000463943 NBPF10Q6P3W6 841 aaKnown RBP25.27■■□□□ 1.64
BCAS4-204ENST00000463943 NBPF15Q8N660 670 aa25.27■■□□□ 1.64
BCAS4-204ENST00000463943 USP42Q9H9J4 1324 aaKnown RBP25.26■■□□□ 1.63
BCAS4-204ENST00000463943 GYS1P13807 737 aa25.26■■□□□ 1.63
BCAS4-204ENST00000463943 NECTIN2Q92692 538 aa25.26■■□□□ 1.63
BCAS4-204ENST00000463943 SPINK5Q9NQ38 1064 aaPredicted RBP25.26■■□□□ 1.63
BCAS4-204ENST00000463943 ZNF521Q96K83 1311 aa25.24■■□□□ 1.63
BCAS4-204ENST00000463943 ELL2O00472 640 aaPredicted RBP25.24■■□□□ 1.63
BCAS4-204ENST00000463943 POLD1P28340 1107 aa25.24■■□□□ 1.63
BCAS4-204ENST00000463943 USPL1Q5W0Q7 1092 aa25.24■■□□□ 1.63
BCAS4-204ENST00000463943 ARXQ96QS3 562 aa25.24■■□□□ 1.63
BCAS4-204ENST00000463943 ZPR1O75312 459 aa25.23■■□□□ 1.63
BCAS4-204ENST00000463943 DUSP27Q5VZP5 1158 aa25.23■■□□□ 1.63
BCAS4-204ENST00000463943 NPM2Q86SE8 214 aaKnown RBP25.23■■□□□ 1.63
BCAS4-204ENST00000463943 PPP1R1BQ9UD71 204 aaPredicted RBP25.23■■□□□ 1.63
BCAS4-204ENST00000463943 NARFQ9UHQ1 456 aa25.23■■□□□ 1.63
BCAS4-204ENST00000463943 TBC1D2BQ9UPU7 963 aa25.23■■□□□ 1.63
BCAS4-204ENST00000463943 MYL6BP14649 208 aa25.22■■□□□ 1.63
BCAS4-204ENST00000463943 C8orf58Q8NAV2 365 aa25.22■■□□□ 1.63
BCAS4-204ENST00000463943 FANCIQ9NVI1 1328 aa25.22■■□□□ 1.63
BCAS4-204ENST00000463943 A0A087WZG4 1122 aa25.21■■□□□ 1.63
BCAS4-204ENST00000463943 FKBP8Q14318 412 aa25.21■■□□□ 1.63
BCAS4-204ENST00000463943 ANXA1P04083 346 aa25.2■■□□□ 1.62
BCAS4-204ENST00000463943 HOXB7P09629 217 aa25.2■■□□□ 1.62
BCAS4-204ENST00000463943 HDGFL1Q5TGJ6 251 aa25.2■■□□□ 1.62
BCAS4-204ENST00000463943 DZIP3Q86Y13 1208 aaKnown RBP25.2■■□□□ 1.62
BCAS4-204ENST00000463943 NLGN1Q8N2Q7 840 aa25.2■■□□□ 1.62
BCAS4-204ENST00000463943 TSPYL6Q8N831 410 aa25.2■■□□□ 1.62
BCAS4-204ENST00000463943 PDIA6Q15084 440 aa25.19■■□□□ 1.62
BCAS4-204ENST00000463943 BCL2L12Q9HB09 334 aa25.19■■□□□ 1.62
BCAS4-204ENST00000463943 SCN7AQ01118 1682 aa25.18■■□□□ 1.62
BCAS4-204ENST00000463943 PROSER3Q2NL68 480 aa25.18■■□□□ 1.62
BCAS4-204ENST00000463943 ERBB4Q15303 1308 aa25.18■■□□□ 1.62
BCAS4-204ENST00000463943 MMP10P09238 476 aa25.17■■□□□ 1.62
BCAS4-204ENST00000463943 CHPF2Q9P2E5 772 aa25.16■■□□□ 1.62
BCAS4-204ENST00000463943 GOLGB1Q14789 3259 aaKnown RBP25.16■■□□□ 1.62
BCAS4-204ENST00000463943 CAMTA2O94983 1202 aa25.15■■□□□ 1.62
BCAS4-204ENST00000463943 GOLGA2Q08379 1002 aa25.15■■□□□ 1.62
BCAS4-204ENST00000463943 LRP10Q7Z4F1 713 aa25.15■■□□□ 1.62
BCAS4-204ENST00000463943 MYH16Q9H6N6 1097 aa25.15■■□□□ 1.62
BCAS4-204ENST00000463943 BCORQ6W2J9 1755 aa25.15■■□□□ 1.62
BCAS4-204ENST00000463943 TWISTNBQ3B726 338 aaPredicted RBP25.14■■□□□ 1.61
BCAS4-204ENST00000463943 TTLL7Q6ZT98 887 aa25.14■■□□□ 1.61
BCAS4-204ENST00000463943 KLHL34Q8N239 644 aa25.14■■□□□ 1.61
BCAS4-204ENST00000463943 HNRNPUQ00839 825 aaKnown RBP eCLIP25.13■■□□□ 1.61
BCAS4-204ENST00000463943 EXOSC9Q06265 439 aaKnown RBP25.13■■□□□ 1.61
BCAS4-204ENST00000463943 FHDC1Q9C0D6 1143 aaPredicted RBP25.13■■□□□ 1.61
BCAS4-204ENST00000463943 DDX21Q9NR30 783 aaKnown RBP eCLIP25.13■■□□□ 1.61
BCAS4-204ENST00000463943 BICDL1Q6ZP65 573 aa25.12■■□□□ 1.61
BCAS4-204ENST00000463943 CDCA7LQ96GN5 454 aa25.12■■□□□ 1.61
BCAS4-204ENST00000463943 DDR1Q08345 913 aa25.11■■□□□ 1.61
BCAS4-204ENST00000463943 NFIXQ14938 502 aa25.11■■□□□ 1.61
BCAS4-204ENST00000463943 TBC1D9BQ66K14 1250 aa25.11■■□□□ 1.61
BCAS4-204ENST00000463943 DBF4Q9UBU7 674 aaPredicted RBP25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms