RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 SBF2Q86WG5 1849 aa14.2□□□□□ -0.14
TRAPPC3-205ENST00000462715 TRIM37O94972 964 aa14.2□□□□□ -0.14
TRAPPC3-205ENST00000462715 DUSP27Q5VZP5 1158 aa14.19□□□□□ -0.14
TRAPPC3-205ENST00000462715 RTF1Q92541 710 aaKnown RBP14.19□□□□□ -0.14
TRAPPC3-205ENST00000462715 SYTL4Q96C24 671 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC3-205ENST00000462715 GBP4Q96PP9 640 aa14.19□□□□□ -0.14
TRAPPC3-205ENST00000462715 ERVV-2B6SEH9 535 aa14.19□□□□□ -0.14
TRAPPC3-205ENST00000462715 PDE3AQ14432 1141 aa14.19□□□□□ -0.14
TRAPPC3-205ENST00000462715 MPRIPQ6WCQ1 1025 aa14.19□□□□□ -0.14
TRAPPC3-205ENST00000462715 IPO4Q8TEX9 1081 aaKnown RBP14.19□□□□□ -0.14
TRAPPC3-205ENST00000462715 KDM6AO15550 1401 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC3-205ENST00000462715 ZNF521Q96K83 1311 aa14.18□□□□□ -0.14
TRAPPC3-205ENST00000462715 HTATSF1O43719 755 aaKnown RBP14.18□□□□□ -0.14
TRAPPC3-205ENST00000462715 PRIM1P49642 420 aaKnown RBP14.18□□□□□ -0.14
TRAPPC3-205ENST00000462715 BBXQ8WY36 941 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC3-205ENST00000462715 GZF1Q9H116 711 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC3-205ENST00000462715 TOGARAM1Q9Y4F4 1720 aa14.18□□□□□ -0.14
TRAPPC3-205ENST00000462715 UPF1Q92900 1129 aaKnown RBP eCLIP14.17□□□□□ -0.143e-20■■■□□ 17.9
TRAPPC3-205ENST00000462715 NOL7Q9UMY1 257 aaKnown RBP14.17□□□□□ -0.14
TRAPPC3-205ENST00000462715 KAT6BQ8WYB5 2073 aa14.17□□□□□ -0.14
TRAPPC3-205ENST00000462715 TMPOP42166 694 aaKnown RBP14.17□□□□□ -0.14
TRAPPC3-205ENST00000462715 LMOD3Q0VAK6 560 aa14.17□□□□□ -0.14
TRAPPC3-205ENST00000462715 NGEFQ8N5V2 710 aa14.17□□□□□ -0.14
TRAPPC3-205ENST00000462715 FAM13BQ9NYF5 915 aa14.17□□□□□ -0.14
TRAPPC3-205ENST00000462715 TMOD3Q9NYL9 352 aa14.17□□□□□ -0.14
TRAPPC3-205ENST00000462715 SCN11AQ9UI33 1791 aa14.17□□□□□ -0.14
TRAPPC3-205ENST00000462715 RNMTO43148 476 aaKnown RBP14.16□□□□□ -0.14
TRAPPC3-205ENST00000462715 KCNQ2O43526 872 aa14.16□□□□□ -0.14
TRAPPC3-205ENST00000462715 GTF2E1P29083 439 aaPredicted RBP14.16□□□□□ -0.14
TRAPPC3-205ENST00000462715 DDIT3P35638 169 aa14.16□□□□□ -0.14
TRAPPC3-205ENST00000462715 CABP4P57796 275 aa14.16□□□□□ -0.14
TRAPPC3-205ENST00000462715 TRMT2AQ8IZ69 625 aaKnown RBP14.16□□□□□ -0.14
TRAPPC3-205ENST00000462715 TNS1Q9HBL0 1735 aaKnown RBP14.16□□□□□ -0.14
TRAPPC3-205ENST00000462715 ADAMTS7Q9UKP4 1686 aa14.16□□□□□ -0.14
TRAPPC3-205ENST00000462715 SASS6Q6UVJ0 657 aa14.16□□□□□ -0.14
TRAPPC3-205ENST00000462715 SEC24BO95487 1268 aa14.15□□□□□ -0.14
TRAPPC3-205ENST00000462715 ZSCAN20P17040 1043 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC3-205ENST00000462715 UQCRHLA0A096LP55 91 aa14.15□□□□□ -0.14
TRAPPC3-205ENST00000462715 SOCS7O14512 581 aa14.15□□□□□ -0.14
TRAPPC3-205ENST00000462715 APAF1O14727 1248 aa14.15□□□□□ -0.14
TRAPPC3-205ENST00000462715 APBA3O96018 575 aa14.15□□□□□ -0.14
TRAPPC3-205ENST00000462715 UQCRHP07919 91 aa14.15□□□□□ -0.14
TRAPPC3-205ENST00000462715 LGR6Q9HBX8 967 aa14.15□□□□□ -0.14
TRAPPC3-205ENST00000462715 ITGB4P16144 1822 aa14.15□□□□□ -0.14
TRAPPC3-205ENST00000462715 MRC1P22897 1456 aa14.14□□□□□ -0.15
TRAPPC3-205ENST00000462715 BAG6P46379 1132 aa14.14□□□□□ -0.15
TRAPPC3-205ENST00000462715 GOLGA2Q08379 1002 aa14.14□□□□□ -0.15
TRAPPC3-205ENST00000462715 TEFQ10587 303 aa14.14□□□□□ -0.15
TRAPPC3-205ENST00000462715 DLG5Q8TDM6 1919 aa14.14□□□□□ -0.15
TRAPPC3-205ENST00000462715 CEMIPQ8WUJ3 1361 aa14.14□□□□□ -0.15
TRAPPC3-205ENST00000462715 BTAF1O14981 1849 aa14.14□□□□□ -0.15
TRAPPC3-205ENST00000462715 NASPP49321 788 aaPredicted RBP14.14□□□□□ -0.15
TRAPPC3-205ENST00000462715 NEUROD2Q15784 382 aa14.14□□□□□ -0.15
TRAPPC3-205ENST00000462715 SLC52A2Q9HAB3 445 aa14.14□□□□□ -0.15
TRAPPC3-205ENST00000462715 RRP7AQ9Y3A4 280 aaKnown RBP14.14□□□□□ -0.15
TRAPPC3-205ENST00000462715 IL17REQ8NFR9 667 aa14.13□□□□□ -0.15
TRAPPC3-205ENST00000462715 SNX21Q969T3 373 aa14.13□□□□□ -0.15
TRAPPC3-205ENST00000462715 NAP1L2Q9ULW6 460 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC3-205ENST00000462715 PPP4R3BQ5MIZ7 849 aa14.13□□□□□ -0.15
TRAPPC3-205ENST00000462715 CLEC17AQ6ZS10 378 aa14.13□□□□□ -0.15
TRAPPC3-205ENST00000462715 MCM10Q7L590 875 aa14.13□□□□□ -0.15
TRAPPC3-205ENST00000462715 PTF1AQ7RTS3 328 aa14.13□□□□□ -0.15
TRAPPC3-205ENST00000462715 PIGBQ92521 554 aa14.13□□□□□ -0.15
TRAPPC3-205ENST00000462715 R3HCC1Q9Y3T6 440 aaKnown RBP14.13□□□□□ -0.15
TRAPPC3-205ENST00000462715 NFATC2IPQ8NCF5 419 aa14.12□□□□□ -0.15
TRAPPC3-205ENST00000462715 ARXQ96QS3 562 aa14.12□□□□□ -0.15
TRAPPC3-205ENST00000462715 RBM25P49756 843 aaKnown RBP14.12□□□□□ -0.15
TRAPPC3-205ENST00000462715 SMARCC1Q92922 1105 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC3-205ENST00000462715 PLSCR1O15162 318 aa14.11□□□□□ -0.15
TRAPPC3-205ENST00000462715 SLFN5Q08AF3 891 aa14.11□□□□□ -0.15
TRAPPC3-205ENST00000462715 GAS2L3Q86XJ1 694 aa14.11□□□□□ -0.15
TRAPPC3-205ENST00000462715 SMC5Q8IY18 1101 aa14.11□□□□□ -0.15
TRAPPC3-205ENST00000462715 PDLIM2Q96JY6 352 aa14.11□□□□□ -0.15
TRAPPC3-205ENST00000462715 RGPD3A6NKT7 1758 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC3-205ENST00000462715 RGPD4Q7Z3J3 1758 aa14.11□□□□□ -0.15
TRAPPC3-205ENST00000462715 DCTN1Q14203 1278 aa14.11□□□□□ -0.15
TRAPPC3-205ENST00000462715 NCBP3Q53F19 620 aaKnown RBP14.11□□□□□ -0.15
TRAPPC3-205ENST00000462715 HSCBQ8IWL3 235 aa14.11□□□□□ -0.15
TRAPPC3-205ENST00000462715 CLUAP1Q96AJ1 413 aa14.1□□□□□ -0.15
TRAPPC3-205ENST00000462715 IGHDP01880 384 aa14.09□□□□□ -0.15
TRAPPC3-205ENST00000462715 ZNF445P59923 1031 aa14.09□□□□□ -0.15
TRAPPC3-205ENST00000462715 TRIM35Q9UPQ4 493 aa14.09□□□□□ -0.15
TRAPPC3-205ENST00000462715 PALLDQ8WX93 1383 aa14.09□□□□□ -0.15
TRAPPC3-205ENST00000462715 EN1Q05925 392 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC3-205ENST00000462715 RAB3GAP1Q15042 981 aa14.09□□□□□ -0.15
TRAPPC3-205ENST00000462715 CCDC27Q2M243 656 aa14.09□□□□□ -0.15
TRAPPC3-205ENST00000462715 DEFB132Q7Z7B7 95 aa14.09□□□□□ -0.15
TRAPPC3-205ENST00000462715 ZHX1Q9UKY1 873 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC3-205ENST00000462715 SIPA1L3O60292 1781 aaPredicted RBP14.08□□□□□ -0.15
TRAPPC3-205ENST00000462715 TAF7Q15545 349 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC3-205ENST00000462715 ASAP1Q9ULH1 1129 aa14.08□□□□□ -0.16
TRAPPC3-205ENST00000462715 ZKSCAN5Q9Y2L8 839 aa14.08□□□□□ -0.16
TRAPPC3-205ENST00000462715 BTBD11A6QL63 1104 aa14.07□□□□□ -0.16
TRAPPC3-205ENST00000462715 GOLGA6L22H0YM25 854 aa14.07□□□□□ -0.16
TRAPPC3-205ENST00000462715 THUMPD2Q9BTF0 503 aaKnown RBP14.07□□□□□ -0.16
TRAPPC3-205ENST00000462715 ATG3Q9NT62 314 aa14.07□□□□□ -0.16
TRAPPC3-205ENST00000462715 SENP3-EIF4A1A0A087X0R7 540 aa14.07□□□□□ -0.16
TRAPPC3-205ENST00000462715 HMGB2P26583 209 aaKnown RBP14.07□□□□□ -0.16
TRAPPC3-205ENST00000462715 KLHL40Q2TBA0 621 aa14.07□□□□□ -0.16
TRAPPC3-205ENST00000462715 TTC5Q8N0Z6 440 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms