RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.01□□□□□ -1.77
HMGN1P18-201ENST00000457642 USP54Q70EL1 1684 aa4□□□□□ -1.77
HMGN1P18-201ENST00000457642 TUBGCP6Q96RT7 1819 aa4□□□□□ -1.77
HMGN1P18-201ENST00000457642 TTC41PQ6P2S7 1318 aa4□□□□□ -1.77
HMGN1P18-201ENST00000457642 RAD50Q92878 1312 aa4□□□□□ -1.77
HMGN1P18-201ENST00000457642 DYNC1I1O14576 645 aa4□□□□□ -1.77
HMGN1P18-201ENST00000457642 SURF6O75683 361 aaKnown RBP4□□□□□ -1.77
HMGN1P18-201ENST00000457642 GLRX3O76003 335 aaKnown RBP4□□□□□ -1.77
HMGN1P18-201ENST00000457642 IFIT2P09913 472 aaKnown RBP4□□□□□ -1.77
HMGN1P18-201ENST00000457642 ZKSCAN1P17029 563 aaPredicted RBP4□□□□□ -1.77
HMGN1P18-201ENST00000457642 PDCP20941 246 aa4□□□□□ -1.77
HMGN1P18-201ENST00000457642 PSMA5P28066 241 aa4□□□□□ -1.77
HMGN1P18-201ENST00000457642 HSPA4P34932 840 aa4□□□□□ -1.77
HMGN1P18-201ENST00000457642 KCNJ4P48050 445 aa4□□□□□ -1.77
HMGN1P18-201ENST00000457642 PRIM1P49642 420 aaKnown RBP4□□□□□ -1.77
HMGN1P18-201ENST00000457642 NLRP6P59044 892 aa4□□□□□ -1.77
HMGN1P18-201ENST00000457642 UBE2HP62256 183 aa4□□□□□ -1.77
HMGN1P18-201ENST00000457642 HMGN5P82970 282 aaKnown RBP4□□□□□ -1.77
HMGN1P18-201ENST00000457642 CHAF1AQ13111 956 aaPredicted RBP4□□□□□ -1.77
HMGN1P18-201ENST00000457642 ANKRD1Q15327 319 aa4□□□□□ -1.77
HMGN1P18-201ENST00000457642 DNTTIP2Q5QJE6 756 aaKnown RBP4□□□□□ -1.77
HMGN1P18-201ENST00000457642 RNF20Q5VTR2 975 aa4□□□□□ -1.77
HMGN1P18-201ENST00000457642 FOXD4L5Q5VV16 416 aaPredicted RBP4□□□□□ -1.77
HMGN1P18-201ENST00000457642 NOL8Q76FK4 1167 aaKnown RBP4□□□□□ -1.77
HMGN1P18-201ENST00000457642 G2E3Q7L622 706 aa4□□□□□ -1.77
HMGN1P18-201ENST00000457642 CLASRPQ8N2M8 674 aaKnown RBP4□□□□□ -1.77
HMGN1P18-201ENST00000457642 TMEM87AQ8NBN3 555 aa4□□□□□ -1.77
HMGN1P18-201ENST00000457642 GPT2Q8TD30 523 aa4□□□□□ -1.77
HMGN1P18-201ENST00000457642 SSH3Q8TE77 659 aa4□□□□□ -1.77
HMGN1P18-201ENST00000457642 FOXD4L4Q8WXT5 416 aaPredicted RBP4□□□□□ -1.77
HMGN1P18-201ENST00000457642 EYA1Q99502 592 aa4□□□□□ -1.77
HMGN1P18-201ENST00000457642 TMEM63CQ9P1W3 806 aa4□□□□□ -1.77
HMGN1P18-201ENST00000457642 RBM27Q9P2N5 1060 aaKnown RBP4□□□□□ -1.77
HMGN1P18-201ENST00000457642 LIMCH1Q9UPQ0 1083 aa4□□□□□ -1.77
HMGN1P18-201ENST00000457642 R3HCC1Q9Y3T6 440 aaKnown RBP4□□□□□ -1.77
HMGN1P18-201ENST00000457642 TBX22Q9Y458 520 aa4□□□□□ -1.77
HMGN1P18-201ENST00000457642 NCAPD2Q15021 1401 aa4□□□□□ -1.77
HMGN1P18-201ENST00000457642 SLIT1O75093 1534 aa4□□□□□ -1.77
HMGN1P18-201ENST00000457642 SALL3Q9BXA9 1300 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 NCKAP5LQ9HCH0 1330 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 CEP170BQ9Y4F5 1589 aaPredicted RBP3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 UQCRHLA0A096LP55 91 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 NUTM2FA1L443 756 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 GOLGA6L4A6NEF3 574 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 SGSM2O43147 1006 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 SRGAP3O43295 1099 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 FOXO3O43524 673 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 STX6O43752 255 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 ALDH1L1O75891 902 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 DDX58O95786 925 aaKnown RBP3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 F13A1P00488 732 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 UQCRHP07919 91 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 ZSCAN22P10073 491 aaPredicted RBP3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 HOXC9P31274 260 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 TEFQ10587 303 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 PKP1Q13835 747 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 POLA2Q14181 598 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 C1orf141Q5JVX7 400 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 PPP1R42Q7Z4L9 355 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 C14orf37Q86TY3 774 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 USP48Q86UV5 1035 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 NUTM1Q86Y26 1132 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 THEMISQ8N1K5 641 aaPredicted RBP3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 RHPN1Q8TCX5 695 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 DNAAF4Q8WXU2 420 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 CHMP4CQ96CF2 233 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 PRIMPOLQ96LW4 560 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 UPF3BQ9BZI7 483 aaKnown RBP3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 PDRG1Q9NUG6 133 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 MIS18AQ9NYP9 233 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 AMOTL2Q9Y2J4 779 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 ZDHHC9Q9Y397 364 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 CYP46A1Q9Y6A2 500 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 PIK3C2AO00443 1686 aa3.99□□□□□ -1.77
HMGN1P18-201ENST00000457642 ARHGAP23Q9P227 1491 aa3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 USP42Q9H9J4 1324 aaKnown RBP3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 OVOS2A0A0G2JMS6 1433 aa3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 PNMA6EA0A0J9YXQ4 647 aa3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 PLEKHG5O94827 1062 aa3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 CCDC192P0DO97 292 aa3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 EIF2S2P20042 333 aaKnown RBP3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 CASTP20810 708 aaKnown RBP3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 KRT85P78386 507 aa3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 XPCQ01831 940 aaPredicted RBP3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 G3BP1Q13283 466 aaKnown RBP eCLIP3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 KRT32Q14532 448 aa3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 AMOTQ4VCS5 1084 aa3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 PLEKHO1Q53GL0 409 aaPredicted RBP3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 AKAP4Q5JQC9 854 aa3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 VPS53Q5VIR6 699 aa3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 TSHZ3Q63HK5 1081 aa3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 VSIG10Q8N0Z9 540 aa3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 KCNH5Q8NCM2 988 aa3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 RNF214Q8ND24 703 aa3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 NECTIN2Q92692 538 aa3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 EVI5LQ96CN4 794 aa3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 LTV1Q96GA3 475 aaPredicted RBP3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 TM6SF1Q9BZW5 370 aa3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 IL1RAPL2Q9NP60 686 aa3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 ECHDC1Q9NTX5 307 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms