RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 TIMELESSQ9UNS1 1208 aa6.6□□□□□ -1.35
GTF3C3-208ENST00000455546 OVOS2A0A0G2JMS6 1433 aa6.59□□□□□ -1.35
GTF3C3-208ENST00000455546 OVOS2A0A0J9YW53 1432 aa6.59□□□□□ -1.35
GTF3C3-208ENST00000455546 OVOS2Q6IE36 1432 aa6.59□□□□□ -1.35
GTF3C3-208ENST00000455546 RGPD2P0DJD1 1756 aa6.59□□□□□ -1.35
GTF3C3-208ENST00000455546 A0A1W2PP64 1363 aa6.59□□□□□ -1.35
GTF3C3-208ENST00000455546 USP31Q70CQ4 1352 aa6.59□□□□□ -1.35
GTF3C3-208ENST00000455546 PARD3Q8TEW0 1356 aa6.59□□□□□ -1.35
GTF3C3-208ENST00000455546 C11orf95C9JLR9 678 aaPredicted RBP6.59□□□□□ -1.35
GTF3C3-208ENST00000455546 TXNRD1Q16881 649 aa6.59□□□□□ -1.35
GTF3C3-208ENST00000455546 PPP4R3BQ5MIZ7 849 aa6.59□□□□□ -1.35
GTF3C3-208ENST00000455546 PHOX2BQ99453 314 aa6.59□□□□□ -1.35
GTF3C3-208ENST00000455546 REPIN1Q9BWE0 567 aaKnown RBP6.59□□□□□ -1.35
GTF3C3-208ENST00000455546 NFAT5O94916 1531 aa6.59□□□□□ -1.35
GTF3C3-208ENST00000455546 ERBB3P21860 1342 aa6.58□□□□□ -1.36
GTF3C3-208ENST00000455546 ZBTB7AO95365 584 aa6.58□□□□□ -1.36
GTF3C3-208ENST00000455546 IL2RBP14784 551 aa6.58□□□□□ -1.36
GTF3C3-208ENST00000455546 COL9A1P20849 921 aa6.58□□□□□ -1.36
GTF3C3-208ENST00000455546 DDX54Q8TDD1 881 aaKnown RBP6.58□□□□□ -1.36
GTF3C3-208ENST00000455546 IP6K1Q92551 441 aa6.58□□□□□ -1.36
GTF3C3-208ENST00000455546 SPON1Q9HCB6 807 aa6.58□□□□□ -1.36
GTF3C3-208ENST00000455546 PPP1R1BQ9UD71 204 aaPredicted RBP6.58□□□□□ -1.36
GTF3C3-208ENST00000455546 CCDC7Q96M83 1385 aa6.57□□□□□ -1.36
GTF3C3-208ENST00000455546 SNPHO15079 494 aa6.57□□□□□ -1.36
GTF3C3-208ENST00000455546 HOXB1P14653 301 aaPredicted RBP6.57□□□□□ -1.36
GTF3C3-208ENST00000455546 AMPHP49418 695 aa6.57□□□□□ -1.36
GTF3C3-208ENST00000455546 KCNQ4P56696 695 aa6.57□□□□□ -1.36
GTF3C3-208ENST00000455546 MDM2Q00987 491 aaPredicted RBP6.57□□□□□ -1.36
GTF3C3-208ENST00000455546 RRS1Q15050 365 aaKnown RBP6.57□□□□□ -1.36
GTF3C3-208ENST00000455546 GIGYF2Q6Y7W6 1299 aaKnown RBP6.57□□□□□ -1.36
GTF3C3-208ENST00000455546 COG3Q96JB2 828 aa6.57□□□□□ -1.36
GTF3C3-208ENST00000455546 PUS7Q96PZ0 661 aaKnown RBP6.57□□□□□ -1.36
GTF3C3-208ENST00000455546 PCGF6Q9BYE7 350 aa6.57□□□□□ -1.36
GTF3C3-208ENST00000455546 GGNBP2Q9H3C7 697 aa6.57□□□□□ -1.36
GTF3C3-208ENST00000455546 EDC4Q6P2E9 1401 aaKnown RBP6.57□□□□□ -1.36
GTF3C3-208ENST00000455546 MAP3K19Q56UN5 1328 aa6.56□□□□□ -1.36
GTF3C3-208ENST00000455546 FYB1O15117 783 aa6.56□□□□□ -1.36
GTF3C3-208ENST00000455546 HOXC9P31274 260 aa6.56□□□□□ -1.36
GTF3C3-208ENST00000455546 SLC15A2Q16348 729 aa6.56□□□□□ -1.36
GTF3C3-208ENST00000455546 LHX8Q68G74 356 aa6.56□□□□□ -1.36
GTF3C3-208ENST00000455546 CDCA7LQ96GN5 454 aa6.56□□□□□ -1.36
GTF3C3-208ENST00000455546 STK32BQ9NY57 414 aa6.56□□□□□ -1.36
GTF3C3-208ENST00000455546 FAM198AQ9UFP1 575 aa6.56□□□□□ -1.36
GTF3C3-208ENST00000455546 BTAF1O14981 1849 aa6.55□□□□□ -1.36
GTF3C3-208ENST00000455546 MS4A1P11836 297 aa6.55□□□□□ -1.36
GTF3C3-208ENST00000455546 TMF1P82094 1093 aa6.55□□□□□ -1.36
GTF3C3-208ENST00000455546 NBPF6Q5VWK0 638 aa6.55□□□□□ -1.36
GTF3C3-208ENST00000455546 USHBP1Q8N6Y0 703 aa6.55□□□□□ -1.36
GTF3C3-208ENST00000455546 SYTL4Q96C24 671 aaPredicted RBP6.55□□□□□ -1.36
GTF3C3-208ENST00000455546 NBPF4Q96M43 638 aa6.55□□□□□ -1.36
GTF3C3-208ENST00000455546 LRRC4BQ9NT99 713 aa6.55□□□□□ -1.36
GTF3C3-208ENST00000455546 USP54Q70EL1 1684 aa6.55□□□□□ -1.36
GTF3C3-208ENST00000455546 BCL9O00512 1426 aa6.54□□□□□ -1.36
GTF3C3-208ENST00000455546 TNS2Q63HR2 1409 aa6.54□□□□□ -1.36
GTF3C3-208ENST00000455546 C3orf80F5H4A9 247 aa6.54□□□□□ -1.36
GTF3C3-208ENST00000455546 PRSS12P56730 875 aa6.54□□□□□ -1.36
GTF3C3-208ENST00000455546 HSP90AB2PQ58FF8 381 aa6.54□□□□□ -1.36
GTF3C3-208ENST00000455546 METTL3Q86U44 580 aaKnown RBP6.54□□□□□ -1.36
GTF3C3-208ENST00000455546 ZCRB1Q8TBF4 217 aaKnown RBP6.54□□□□□ -1.36
GTF3C3-208ENST00000455546 KCNK17Q96T54 332 aa6.54□□□□□ -1.36
GTF3C3-208ENST00000455546 CARD14Q9BXL6 1004 aa6.54□□□□□ -1.36
GTF3C3-208ENST00000455546 BCL2L12Q9HB09 334 aa6.54□□□□□ -1.36
GTF3C3-208ENST00000455546 ADGRG1Q9Y653 693 aa6.54□□□□□ -1.36
GTF3C3-208ENST00000455546 RGPD3A6NKT7 1758 aaPredicted RBP6.54□□□□□ -1.36
GTF3C3-208ENST00000455546 RGPD4Q7Z3J3 1758 aa6.54□□□□□ -1.36
GTF3C3-208ENST00000455546 MAP2P11137 1827 aaKnown RBP6.53□□□□□ -1.36
GTF3C3-208ENST00000455546 PTPREP23469 700 aa6.53□□□□□ -1.36
GTF3C3-208ENST00000455546 YY1P25490 414 aa6.53□□□□□ -1.36
GTF3C3-208ENST00000455546 ZNF827Q17R98 1081 aa6.53□□□□□ -1.36
GTF3C3-208ENST00000455546 PROX2Q3B8N5 592 aa6.53□□□□□ -1.36
GTF3C3-208ENST00000455546 PXYLP1Q8TE99 480 aa6.53□□□□□ -1.36
GTF3C3-208ENST00000455546 POLR3GLQ9BT43 218 aa6.53□□□□□ -1.36
GTF3C3-208ENST00000455546 TSKSQ9UJT2 592 aa6.53□□□□□ -1.36
GTF3C3-208ENST00000455546 CASZ1Q86V15 1759 aa6.53□□□□□ -1.36
GTF3C3-208ENST00000455546 USP47Q96K76 1375 aa6.53□□□□□ -1.36
GTF3C3-208ENST00000455546 NHSQ6T4R5 1651 aa6.52□□□□□ -1.37
GTF3C3-208ENST00000455546 ABCC6O95255 1503 aa6.52□□□□□ -1.37
GTF3C3-208ENST00000455546 PPP1R3GB7ZBB8 358 aa6.52□□□□□ -1.37
GTF3C3-208ENST00000455546 PPM1GO15355 546 aaPredicted RBP6.52□□□□□ -1.37
GTF3C3-208ENST00000455546 CLCN1P35523 988 aa6.52□□□□□ -1.37
GTF3C3-208ENST00000455546 TTC13Q8NBP0 860 aa6.52□□□□□ -1.37
GTF3C3-208ENST00000455546 DDRGK1Q96HY6 314 aa6.52□□□□□ -1.37
GTF3C3-208ENST00000455546 SYT17Q9BSW7 474 aa6.52□□□□□ -1.37
GTF3C3-208ENST00000455546 FHDC1Q9C0D6 1143 aaPredicted RBP6.52□□□□□ -1.37
GTF3C3-208ENST00000455546 GPCPD1Q9NPB8 672 aa6.52□□□□□ -1.37
GTF3C3-208ENST00000455546 ANKRD36BQ8N2N9 1353 aa6.52□□□□□ -1.37
GTF3C3-208ENST00000455546 SMAPO00193 183 aa6.51□□□□□ -1.37
GTF3C3-208ENST00000455546 PSEN2P49810 448 aa6.51□□□□□ -1.37
GTF3C3-208ENST00000455546 VARS2Q5ST30 1063 aaKnown RBP6.51□□□□□ -1.37
GTF3C3-208ENST00000455546 MARVELD3Q96A59 401 aa6.51□□□□□ -1.37
GTF3C3-208ENST00000455546 MTFR1LQ9H019 292 aa6.51□□□□□ -1.37
GTF3C3-208ENST00000455546 RBM27Q9P2N5 1060 aaKnown RBP6.51□□□□□ -1.37
GTF3C3-208ENST00000455546 EMILIN1Q9Y6C2 1016 aa6.51□□□□□ -1.37
GTF3C3-208ENST00000455546 NINLQ9Y2I6 1382 aa6.51□□□□□ -1.37
GTF3C3-208ENST00000455546 MYOM1P52179 1685 aa6.51□□□□□ -1.37
GTF3C3-208ENST00000455546 MEGF6O75095 1541 aa6.5□□□□□ -1.37
GTF3C3-208ENST00000455546 SHANK3Q9BYB0 1731 aa6.5□□□□□ -1.37
GTF3C3-208ENST00000455546 FAM208AQ9UK61 1670 aaKnown RBP6.5□□□□□ -1.37
GTF3C3-208ENST00000455546 OATP04181 439 aa6.5□□□□□ -1.37
GTF3C3-208ENST00000455546 TATP17735 454 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms