RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 CEP131Q9UPN4 1083 aa14.04□□□□□ -0.16
SEC16A-207ENST00000453963 PCDHB15Q9Y5E8 787 aa14.04□□□□□ -0.16
SEC16A-207ENST00000453963 TOP1P11387 765 aaKnown RBP14.04□□□□□ -0.16
SEC16A-207ENST00000453963 CKAP2LQ8IYA6 745 aa14.04□□□□□ -0.16
SEC16A-207ENST00000453963 ARHGAP45Q92619 1136 aa14.04□□□□□ -0.16
SEC16A-207ENST00000453963 GDPD2Q9HCC8 539 aa14.04□□□□□ -0.16
SEC16A-207ENST00000453963 RBM27Q9P2N5 1060 aaKnown RBP14.04□□□□□ -0.16
SEC16A-207ENST00000453963 KIF5CO60282 957 aa14.04□□□□□ -0.16
SEC16A-207ENST00000453963 MAP9Q49MG5 647 aa14.04□□□□□ -0.16
SEC16A-207ENST00000453963 ZKSCAN5Q9Y2L8 839 aa14.04□□□□□ -0.16
SEC16A-207ENST00000453963 STARD3NLO95772 234 aa14.04□□□□□ -0.16
SEC16A-207ENST00000453963 FKBP4Q02790 459 aaKnown RBP eCLIP14.04□□□□□ -0.16
SEC16A-207ENST00000453963 MCM3P25205 808 aa14.03□□□□□ -0.16
SEC16A-207ENST00000453963 MIS18AQ9NYP9 233 aa14.03□□□□□ -0.16
SEC16A-207ENST00000453963 PTCD1O75127 700 aaKnown RBP14.03□□□□□ -0.16
SEC16A-207ENST00000453963 ZNF165P49910 485 aa14.03□□□□□ -0.16
SEC16A-207ENST00000453963 FBXO3Q9UK99 471 aa14.03□□□□□ -0.16
SEC16A-207ENST00000453963 LRRFIP2Q9Y608 721 aaKnown RBP14.03□□□□□ -0.16
SEC16A-207ENST00000453963 CASQ1P31415 396 aa14.03□□□□□ -0.16
SEC16A-207ENST00000453963 EMILIN1Q9Y6C2 1016 aa14.03□□□□□ -0.16
SEC16A-207ENST00000453963 AMOTQ4VCS5 1084 aa14.03□□□□□ -0.16
SEC16A-207ENST00000453963 NUP133Q8WUM0 1156 aa14.03□□□□□ -0.16
SEC16A-207ENST00000453963 KIAA1328Q86T90 577 aa14.02□□□□□ -0.16
SEC16A-207ENST00000453963 DISP3Q9P2K9 1392 aa14.02□□□□□ -0.16
SEC16A-207ENST00000453963 FAM193AP78312 1265 aa14.02□□□□□ -0.16
SEC16A-207ENST00000453963 BMS1Q14692 1282 aaKnown RBP14.02□□□□□ -0.16
SEC16A-207ENST00000453963 STX1AQ16623 288 aa14.02□□□□□ -0.16
SEC16A-207ENST00000453963 HSP90AB3PQ58FF7 597 aa14.02□□□□□ -0.16
SEC16A-207ENST00000453963 SOGA3Q5TF21 947 aa14.02□□□□□ -0.16
SEC16A-207ENST00000453963 JAKMIP3Q5VZ66 844 aa14.02□□□□□ -0.16
SEC16A-207ENST00000453963 TAF7Q15545 349 aaPredicted RBP14.02□□□□□ -0.17
SEC16A-207ENST00000453963 TMEM132AQ24JP5 1023 aa14.02□□□□□ -0.17
SEC16A-207ENST00000453963 KIF4BQ2VIQ3 1234 aa14.02□□□□□ -0.17
SEC16A-207ENST00000453963 TMX3Q96JJ7 454 aa14.02□□□□□ -0.17
SEC16A-207ENST00000453963 C14orf93Q9H972 538 aaKnown RBP14.02□□□□□ -0.17
SEC16A-207ENST00000453963 GOLGA6L9A6NEM1 432 aa14.01□□□□□ -0.17
SEC16A-207ENST00000453963 GJB2P29033 226 aa14.01□□□□□ -0.17
SEC16A-207ENST00000453963 EIF5P55010 431 aaKnown RBP14.01□□□□□ -0.17
SEC16A-207ENST00000453963 NOLC1Q14978 699 aaKnown RBP eCLIP14.01□□□□□ -0.17
SEC16A-207ENST00000453963 WWC2Q6AWC2 1192 aa14.01□□□□□ -0.17
SEC16A-207ENST00000453963 SMC5Q8IY18 1101 aa14.01□□□□□ -0.17
SEC16A-207ENST00000453963 UBAC1Q9BSL1 405 aa14.01□□□□□ -0.17
SEC16A-207ENST00000453963 PARD3Q8TEW0 1356 aa14.01□□□□□ -0.17
SEC16A-207ENST00000453963 HCLS1P14317 486 aaPredicted RBP14.01□□□□□ -0.17
SEC16A-207ENST00000453963 C8orf76Q96K31 380 aa14.01□□□□□ -0.17
SEC16A-207ENST00000453963 TRMT1Q9NXH9 659 aaKnown RBP14.01□□□□□ -0.17
SEC16A-207ENST00000453963 PEG3Q9GZU2 1588 aa14.01□□□□□ -0.17
SEC16A-207ENST00000453963 POTEB2H3BUK9 544 aa14.01□□□□□ -0.17
SEC16A-207ENST00000453963 TANGO6Q9C0B7 1094 aa14.01□□□□□ -0.17
SEC16A-207ENST00000453963 SHTN1A0MZ66 631 aa14.01□□□□□ -0.17
SEC16A-207ENST00000453963 ATP2B2Q01814 1243 aa14.01□□□□□ -0.17
SEC16A-207ENST00000453963 NOS1P29475 1434 aa14□□□□□ -0.17
SEC16A-207ENST00000453963 ANAPC15P60006 121 aa14□□□□□ -0.17
SEC16A-207ENST00000453963 RAB3GAP1Q15042 981 aa14□□□□□ -0.17
SEC16A-207ENST00000453963 BOLA2Q9H3K6 86 aa14□□□□□ -0.17
SEC16A-207ENST00000453963 CCDC171Q6TFL3 1326 aa14□□□□□ -0.17
SEC16A-207ENST00000453963 STK11IPQ8N1F8 1099 aa14□□□□□ -0.17
SEC16A-207ENST00000453963 FSIP1Q8NA03 581 aa14□□□□□ -0.17
SEC16A-207ENST00000453963 PPP1R1BQ9UD71 204 aaPredicted RBP14□□□□□ -0.17
SEC16A-207ENST00000453963 LARP1Q6PKG0 1096 aaKnown RBP13.99□□□□□ -0.17
SEC16A-207ENST00000453963 CENPHQ9H3R5 247 aa13.99□□□□□ -0.17
SEC16A-207ENST00000453963 F6X3S4 739 aa13.99□□□□□ -0.17
SEC16A-207ENST00000453963 ZSCAN22P10073 491 aaPredicted RBP13.99□□□□□ -0.17
SEC16A-207ENST00000453963 SNW1Q13573 536 aaKnown RBP13.99□□□□□ -0.17
SEC16A-207ENST00000453963 EVI5LQ96CN4 794 aa13.99□□□□□ -0.17
SEC16A-207ENST00000453963 FAM107BQ9H098 131 aa13.99□□□□□ -0.17
SEC16A-207ENST00000453963 BMP2KQ9NSY1 1161 aaPredicted RBP13.99□□□□□ -0.17
SEC16A-207ENST00000453963 RALGAPBQ86X10 1494 aa13.99□□□□□ -0.17
SEC16A-207ENST00000453963 CEP135Q66GS9 1140 aa13.99□□□□□ -0.17
SEC16A-207ENST00000453963 USHBP1Q8N6Y0 703 aa13.99□□□□□ -0.17
SEC16A-207ENST00000453963 KRI1Q8N9T8 703 aaKnown RBP13.99□□□□□ -0.17
SEC16A-207ENST00000453963 ZNF397Q8NF99 534 aaPredicted RBP13.99□□□□□ -0.17
SEC16A-207ENST00000453963 ECHDC1Q9NTX5 307 aa13.99□□□□□ -0.17
SEC16A-207ENST00000453963 TMOD3Q9NYL9 352 aa13.99□□□□□ -0.17
SEC16A-207ENST00000453963 ZHX1Q9UKY1 873 aaPredicted RBP13.99□□□□□ -0.17
SEC16A-207ENST00000453963 CCDC150Q8NCX0 1101 aa13.98□□□□□ -0.17
SEC16A-207ENST00000453963 TAF4BQ92750 862 aa13.98□□□□□ -0.17
SEC16A-207ENST00000453963 CCDC85AQ96PX6 553 aaPredicted RBP13.98□□□□□ -0.17
SEC16A-207ENST00000453963 HMGB2P26583 209 aaKnown RBP13.98□□□□□ -0.17
SEC16A-207ENST00000453963 TDO2P48775 406 aa13.98□□□□□ -0.17
SEC16A-207ENST00000453963 TFIP11Q9UBB9 837 aaKnown RBP13.98□□□□□ -0.17
SEC16A-207ENST00000453963 POLR3GO15318 223 aaPredicted RBP13.98□□□□□ -0.17
SEC16A-207ENST00000453963 KRT222Q8N1A0 295 aa13.98□□□□□ -0.17
SEC16A-207ENST00000453963 ZHX3Q9H4I2 956 aa13.98□□□□□ -0.17
SEC16A-207ENST00000453963 SDSP20132 328 aa13.97□□□□□ -0.17
SEC16A-207ENST00000453963 FAM200AQ8TCP9 573 aa13.97□□□□□ -0.17
SEC16A-207ENST00000453963 DNAAF4Q8WXU2 420 aa13.97□□□□□ -0.17
SEC16A-207ENST00000453963 FLIIQ13045 1269 aa13.97□□□□□ -0.17
SEC16A-207ENST00000453963 TMC6Q7Z403 805 aa13.97□□□□□ -0.17
SEC16A-207ENST00000453963 FAM135AQ9P2D6 1515 aa13.97□□□□□ -0.17
SEC16A-207ENST00000453963 SPDYE4A6NLX3 237 aa13.97□□□□□ -0.17
SEC16A-207ENST00000453963 IGHMBP2P38935 993 aaKnown RBP13.97□□□□□ -0.17
SEC16A-207ENST00000453963 SPA17Q15506 151 aa13.97□□□□□ -0.17
SEC16A-207ENST00000453963 GPATCH8Q9UKJ3 1502 aaKnown RBP13.97□□□□□ -0.17
SEC16A-207ENST00000453963 CCDC196A0A1B0GTZ2 297 aa13.97□□□□□ -0.17
SEC16A-207ENST00000453963 BICDL1Q6ZP65 573 aa13.97□□□□□ -0.17
SEC16A-207ENST00000453963 GTF2F1P35269 517 aaKnown RBP eCLIP13.96□□□□□ -0.17
SEC16A-207ENST00000453963 GIMAP6Q6P9H5 292 aa13.96□□□□□ -0.17
SEC16A-207ENST00000453963 ZSCAN16Q9H4T2 348 aaPredicted RBP13.96□□□□□ -0.17
SEC16A-207ENST00000453963 ZRSR2Q15696 482 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms