RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 SSBP05455 408 aaKnown RBP eCLIP9.09□□□□□ -0.95
RIF1-206ENST00000453091 SMARCE1Q969G3 411 aa9.09□□□□□ -0.95
RIF1-206ENST00000453091 SLC52A1Q9NWF4 448 aa9.09□□□□□ -0.95
RIF1-206ENST00000453091 ABCF2Q9UG63 623 aa9.09□□□□□ -0.95
RIF1-206ENST00000453091 WASLO00401 505 aaPredicted RBP9.09□□□□□ -0.95
RIF1-206ENST00000453091 ANKRD1Q15327 319 aa9.09□□□□□ -0.95
RIF1-206ENST00000453091 LIMCH1Q9UPQ0 1083 aa9.09□□□□□ -0.95
RIF1-206ENST00000453091 RPRD2Q5VT52 1461 aaKnown RBP9.09□□□□□ -0.95
RIF1-206ENST00000453091 CWC15Q9P013 229 aaKnown RBP9.09□□□□□ -0.95
RIF1-206ENST00000453091 PA2G4Q9UQ80 394 aaKnown RBP9.09□□□□□ -0.95
RIF1-206ENST00000453091 CCAR1Q8IX12 1150 aaKnown RBP9.09□□□□□ -0.96
RIF1-206ENST00000453091 KIF1BPQ96EK5 621 aa9.09□□□□□ -0.96
RIF1-206ENST00000453091 TCEAL9Q9UHQ7 104 aa9.09□□□□□ -0.96
RIF1-206ENST00000453091 PTPN23Q9H3S7 1636 aa9.08□□□□□ -0.96
RIF1-206ENST00000453091 CD109Q6YHK3 1445 aa9.08□□□□□ -0.96
RIF1-206ENST00000453091 RBM5P52756 815 aaKnown RBP eCLIP9.08□□□□□ -0.962e-8■■■□□ 16.5
RIF1-206ENST00000453091 DNM1Q05193 864 aaKnown RBP9.08□□□□□ -0.96
RIF1-206ENST00000453091 CCDC57Q2TAC2 916 aa9.08□□□□□ -0.96
RIF1-206ENST00000453091 ACEP12821 1306 aa9.08□□□□□ -0.96
RIF1-206ENST00000453091 EFCAB5A4FU69 1503 aa9.08□□□□□ -0.96
RIF1-206ENST00000453091 DEF6Q9H4E7 631 aa9.08□□□□□ -0.96
RIF1-206ENST00000453091 FLIIQ13045 1269 aa9.08□□□□□ -0.96
RIF1-206ENST00000453091 SART3Q15020 963 aaKnown RBP9.08□□□□□ -0.96
RIF1-206ENST00000453091 MRPL50Q8N5N7 158 aaKnown RBP9.08□□□□□ -0.96
RIF1-206ENST00000453091 DNAJC25Q9H1X3 360 aa9.08□□□□□ -0.96
RIF1-206ENST00000453091 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.08□□□□□ -0.96
RIF1-206ENST00000453091 NOLC1Q14978 699 aaKnown RBP eCLIP9.08□□□□□ -0.96
RIF1-206ENST00000453091 PPP1R42Q7Z4L9 355 aa9.08□□□□□ -0.96
RIF1-206ENST00000453091 PHF8Q9UPP1 1060 aa9.08□□□□□ -0.96
RIF1-206ENST00000453091 CT47A1Q5JQC4 288 aaPredicted RBP9.08□□□□□ -0.96
RIF1-206ENST00000453091 IQSEC3Q9UPP2 1182 aaPredicted RBP9.08□□□□□ -0.96
RIF1-206ENST00000453091 KRT18P05783 430 aaKnown RBP9.08□□□□□ -0.96
RIF1-206ENST00000453091 XBP1P17861 261 aa9.08□□□□□ -0.96
RIF1-206ENST00000453091 TMCO3Q6UWJ1 677 aa9.08□□□□□ -0.96
RIF1-206ENST00000453091 MAP3K2Q9Y2U5 619 aa9.08□□□□□ -0.96
RIF1-206ENST00000453091 KIAA0586Q9BVV6 1533 aa9.08□□□□□ -0.96
RIF1-206ENST00000453091 URB2Q14146 1524 aaKnown RBP9.07□□□□□ -0.96
RIF1-206ENST00000453091 TRMT1LQ7Z2T5 733 aaKnown RBP9.07□□□□□ -0.96
RIF1-206ENST00000453091 CDK5RAP3Q96JB5 506 aa9.07□□□□□ -0.96
RIF1-206ENST00000453091 DHX29Q7Z478 1369 aaKnown RBP9.07□□□□□ -0.96
RIF1-206ENST00000453091 TDO2P48775 406 aa9.07□□□□□ -0.96
RIF1-206ENST00000453091 CCDC181Q5TID7 509 aa9.07□□□□□ -0.96
RIF1-206ENST00000453091 ANO6Q4KMQ2 910 aa9.07□□□□□ -0.96
RIF1-206ENST00000453091 ACSBG1Q96GR2 724 aa9.07□□□□□ -0.96
RIF1-206ENST00000453091 CARD14Q9BXL6 1004 aa9.07□□□□□ -0.96
RIF1-206ENST00000453091 SEPT11Q9NVA2 429 aaKnown RBP9.07□□□□□ -0.96
RIF1-206ENST00000453091 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.07□□□□□ -0.96
RIF1-206ENST00000453091 SFPQP23246 707 aaKnown RBP eCLIP9.07□□□□□ -0.96
RIF1-206ENST00000453091 CHST3Q7LGC8 479 aa9.07□□□□□ -0.96
RIF1-206ENST00000453091 MPHOSPH8Q99549 860 aa9.06□□□□□ -0.96
RIF1-206ENST00000453091 MINDY4BA8MYZ0 360 aa9.06□□□□□ -0.96
RIF1-206ENST00000453091 FAM173BQ6P4H8 233 aa9.06□□□□□ -0.96
RIF1-206ENST00000453091 DNAAF4Q8WXU2 420 aa9.06□□□□□ -0.96
RIF1-206ENST00000453091 ERCC4Q92889 916 aaPredicted RBP9.06□□□□□ -0.96
RIF1-206ENST00000453091 GOLIM4O00461 696 aa9.06□□□□□ -0.96
RIF1-206ENST00000453091 PTGS1P23219 599 aa9.06□□□□□ -0.96
RIF1-206ENST00000453091 CFAP45Q9UL16 551 aa9.06□□□□□ -0.96
RIF1-206ENST00000453091 METTL24Q5JXM2 366 aa9.06□□□□□ -0.96
RIF1-206ENST00000453091 GLRX3O76003 335 aaKnown RBP9.06□□□□□ -0.96
RIF1-206ENST00000453091 CASQ1P31415 396 aa9.06□□□□□ -0.96
RIF1-206ENST00000453091 BRF1Q92994 677 aa9.06□□□□□ -0.96
RIF1-206ENST00000453091 CCDC141Q6ZP82 1450 aa9.06□□□□□ -0.96
RIF1-206ENST00000453091 CCP110O43303 1012 aa9.06□□□□□ -0.96
RIF1-206ENST00000453091 CBFA2T2O43439 604 aa9.06□□□□□ -0.96
RIF1-206ENST00000453091 RBM25P49756 843 aaKnown RBP9.06□□□□□ -0.96
RIF1-206ENST00000453091 IFIT1P09914 478 aaKnown RBP9.06□□□□□ -0.96
RIF1-206ENST00000453091 CEP135Q66GS9 1140 aa9.06□□□□□ -0.96
RIF1-206ENST00000453091 TAX1BP1Q86VP1 789 aa9.06□□□□□ -0.96
RIF1-206ENST00000453091 PI4KAP2A4QPH2 592 aa9.05□□□□□ -0.96
RIF1-206ENST00000453091 ZSCAN22P10073 491 aaPredicted RBP9.05□□□□□ -0.96
RIF1-206ENST00000453091 ARHGAP29Q52LW3 1261 aa9.05□□□□□ -0.96
RIF1-206ENST00000453091 PI4KAP1Q8N8J0 262 aa9.05□□□□□ -0.96
RIF1-206ENST00000453091 PDE1AP54750 535 aa9.05□□□□□ -0.96
RIF1-206ENST00000453091 RAB3GAP1Q15042 981 aa9.05□□□□□ -0.96
RIF1-206ENST00000453091 PHACTR3Q96KR7 559 aa9.05□□□□□ -0.96
RIF1-206ENST00000453091 C14orf93Q9H972 538 aaKnown RBP9.05□□□□□ -0.96
RIF1-206ENST00000453091 CEP126Q9P2H0 1117 aa9.05□□□□□ -0.96
RIF1-206ENST00000453091 DDX46Q7L014 1031 aaKnown RBP9.05□□□□□ -0.96
RIF1-206ENST00000453091 TRIM22Q8IYM9 498 aa9.05□□□□□ -0.96
RIF1-206ENST00000453091 USP5P45974 858 aa9.05□□□□□ -0.96
RIF1-206ENST00000453091 ZNF165P49910 485 aa9.05□□□□□ -0.96
RIF1-206ENST00000453091 CCDC43Q96MW1 224 aaKnown RBP9.05□□□□□ -0.96
RIF1-206ENST00000453091 HECW1Q76N89 1606 aa9.05□□□□□ -0.96
RIF1-206ENST00000453091 EPB41L2O43491 1005 aaKnown RBP9.05□□□□□ -0.96
RIF1-206ENST00000453091 TOP1P11387 765 aaKnown RBP9.05□□□□□ -0.96
RIF1-206ENST00000453091 HDAC1Q13547 482 aaPredicted RBP9.05□□□□□ -0.96
RIF1-206ENST00000453091 KIF4BQ2VIQ3 1234 aa9.05□□□□□ -0.96
RIF1-206ENST00000453091 ADGRL1O94910 1474 aa9.05□□□□□ -0.96
RIF1-206ENST00000453091 KRT28Q7Z3Y7 464 aa9.05□□□□□ -0.96
RIF1-206ENST00000453091 ESYT1Q9BSJ8 1104 aa9.05□□□□□ -0.96
RIF1-206ENST00000453091 ANO10Q9NW15 660 aa9.05□□□□□ -0.96
RIF1-206ENST00000453091 DACT1Q9NYF0 836 aa9.05□□□□□ -0.96
RIF1-206ENST00000453091 LRP2BPQ9P2M1 347 aa9.05□□□□□ -0.96
RIF1-206ENST00000453091 ABCA10Q8WWZ4 1543 aa9.05□□□□□ -0.96
RIF1-206ENST00000453091 IMMTQ16891 758 aaKnown RBP9.04□□□□□ -0.96
RIF1-206ENST00000453091 DDX17Q92841 729 aaKnown RBP9.04□□□□□ -0.96
RIF1-206ENST00000453091 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.04□□□□□ -0.968e-7■■■□□ 17.6
RIF1-206ENST00000453091 EIF5P55010 431 aaKnown RBP9.04□□□□□ -0.96
RIF1-206ENST00000453091 C8orf76Q96K31 380 aa9.04□□□□□ -0.96
RIF1-206ENST00000453091 GOLGA8BA8MQT2 603 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms