RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 ASB16Q96NS5 453 aa4.74□□□□□ -1.65
HMGB3P8-201ENST00000449709 PPP4R2Q9NY27 417 aa4.74□□□□□ -1.65
HMGB3P8-201ENST00000449709 SEPT3Q9UH03 358 aa4.74□□□□□ -1.65
HMGB3P8-201ENST00000449709 DCTN4Q9UJW0 460 aa4.74□□□□□ -1.65
HMGB3P8-201ENST00000449709 DNMT3AQ9Y6K1 912 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P8-201ENST00000449709 PTCD1O75127 700 aaKnown RBP4.73□□□□□ -1.65
HMGB3P8-201ENST00000449709 LGR5O75473 907 aa4.73□□□□□ -1.65
HMGB3P8-201ENST00000449709 HSP90AA1P07900 732 aaKnown RBP4.73□□□□□ -1.65
HMGB3P8-201ENST00000449709 VARSP26640 1264 aaKnown RBP4.73□□□□□ -1.65
HMGB3P8-201ENST00000449709 MAPK1P28482 360 aa4.73□□□□□ -1.65
HMGB3P8-201ENST00000449709 VEGFBP49765 207 aa4.73□□□□□ -1.65
HMGB3P8-201ENST00000449709 TAGLNQ01995 201 aaKnown RBP4.73□□□□□ -1.65
HMGB3P8-201ENST00000449709 PSME1Q06323 249 aa4.73□□□□□ -1.65
HMGB3P8-201ENST00000449709 NNTQ13423 1086 aa4.73□□□□□ -1.65
HMGB3P8-201ENST00000449709 SF3B2Q13435 895 aaKnown RBP4.73□□□□□ -1.65
HMGB3P8-201ENST00000449709 FKBP5Q13451 457 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P8-201ENST00000449709 COL19A1Q14993 1142 aa4.73□□□□□ -1.65
HMGB3P8-201ENST00000449709 CAPN12Q6ZSI9 719 aa4.73□□□□□ -1.65
HMGB3P8-201ENST00000449709 CCDC125Q86Z20 511 aa4.73□□□□□ -1.65
HMGB3P8-201ENST00000449709 SEPT12Q8IYM1 358 aa4.73□□□□□ -1.65
HMGB3P8-201ENST00000449709 COL26A1Q96A83 441 aa4.73□□□□□ -1.65
HMGB3P8-201ENST00000449709 HINFPQ9BQA5 517 aa4.73□□□□□ -1.65
HMGB3P8-201ENST00000449709 C1QTNF2Q9BXJ5 285 aa4.73□□□□□ -1.65
HMGB3P8-201ENST00000449709 RRAGDQ9NQL2 400 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P8-201ENST00000449709 PCDHB11Q9Y5F2 797 aa4.73□□□□□ -1.65
HMGB3P8-201ENST00000449709 SMARCA2P51531 1590 aa4.73□□□□□ -1.65
HMGB3P8-201ENST00000449709 TPM2P07951 284 aa4.72□□□□□ -1.65
HMGB3P8-201ENST00000449709 NCLP19338 710 aaKnown RBP4.72□□□□□ -1.65
HMGB3P8-201ENST00000449709 CANXP27824 592 aaKnown RBP4.72□□□□□ -1.65
HMGB3P8-201ENST00000449709 ITGAEP38570 1179 aa4.72□□□□□ -1.65
HMGB3P8-201ENST00000449709 TERF1P54274 439 aa4.72□□□□□ -1.65
HMGB3P8-201ENST00000449709 AGERQ15109 404 aa4.72□□□□□ -1.65
HMGB3P8-201ENST00000449709 NBPF20Q3BBV1 942 aa4.72□□□□□ -1.65
HMGB3P8-201ENST00000449709 DHX37Q8IY37 1157 aaKnown RBP4.72□□□□□ -1.65
HMGB3P8-201ENST00000449709 TRMT44Q8IYL2 757 aaKnown RBP4.72□□□□□ -1.65
HMGB3P8-201ENST00000449709 TSEN2Q8NCE0 465 aaKnown RBP4.72□□□□□ -1.65
HMGB3P8-201ENST00000449709 SLC10A4Q96EP9 437 aa4.72□□□□□ -1.65
HMGB3P8-201ENST00000449709 ZFP42Q96MM3 310 aa4.72□□□□□ -1.65
HMGB3P8-201ENST00000449709 PURBQ96QR8 312 aaKnown RBP4.72□□□□□ -1.65
HMGB3P8-201ENST00000449709 MKNK1Q9BUB5 465 aa4.72□□□□□ -1.65
HMGB3P8-201ENST00000449709 CHMP4BQ9H444 224 aaKnown RBP4.72□□□□□ -1.65
HMGB3P8-201ENST00000449709 TMEM51Q9NW97 253 aa4.72□□□□□ -1.65
HMGB3P8-201ENST00000449709 NXF1Q9UBU9 619 aaKnown RBP4.72□□□□□ -1.65
HMGB3P8-201ENST00000449709 STK17AQ9UEE5 414 aa4.72□□□□□ -1.65
HMGB3P8-201ENST00000449709 TIMP2P16035 220 aa4.71□□□□□ -1.66
HMGB3P8-201ENST00000449709 NPR3P17342 541 aa4.71□□□□□ -1.66
HMGB3P8-201ENST00000449709 ANP32AP39687 249 aaKnown RBP4.71□□□□□ -1.66
HMGB3P8-201ENST00000449709 WDR4P57081 412 aaKnown RBP4.71□□□□□ -1.66
HMGB3P8-201ENST00000449709 INSM1Q01101 510 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P8-201ENST00000449709 SLC20A2Q08357 652 aa4.71□□□□□ -1.66
HMGB3P8-201ENST00000449709 MTMR3Q13615 1198 aa4.71□□□□□ -1.66
HMGB3P8-201ENST00000449709 ARID5BQ14865 1188 aa4.71□□□□□ -1.66
HMGB3P8-201ENST00000449709 ZSCAN29Q8IWY8 852 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P8-201ENST00000449709 MPNDQ8N594 471 aa4.71□□□□□ -1.66
HMGB3P8-201ENST00000449709 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.71□□□□□ -1.66
HMGB3P8-201ENST00000449709 DCAF11Q8TEB1 546 aa4.71□□□□□ -1.66
HMGB3P8-201ENST00000449709 CDV3Q9UKY7 258 aaKnown RBP4.71□□□□□ -1.66
HMGB3P8-201ENST00000449709 RNF123Q5XPI4 1314 aa4.71□□□□□ -1.66
HMGB3P8-201ENST00000449709 SOBPA7XYQ1 873 aa4.7□□□□□ -1.66
HMGB3P8-201ENST00000449709 RECKO95980 971 aa4.7□□□□□ -1.66
HMGB3P8-201ENST00000449709 ADH1CP00326 375 aa4.7□□□□□ -1.66
HMGB3P8-201ENST00000449709 IGFBP4P22692 258 aa4.7□□□□□ -1.66
HMGB3P8-201ENST00000449709 GMPRP36959 345 aa4.7□□□□□ -1.66
HMGB3P8-201ENST00000449709 RGS3P49796 1198 aa4.7□□□□□ -1.66
HMGB3P8-201ENST00000449709 CNGB1Q14028 1251 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P8-201ENST00000449709 MRPL14Q6P1L8 145 aaKnown RBP4.7□□□□□ -1.66
HMGB3P8-201ENST00000449709 RGL4Q8IZJ4 473 aa4.7□□□□□ -1.66
HMGB3P8-201ENST00000449709 SLC16A10Q8TF71 515 aa4.7□□□□□ -1.66
HMGB3P8-201ENST00000449709 C8orf37Q96NL8 207 aa4.7□□□□□ -1.66
HMGB3P8-201ENST00000449709 MAP7D2Q96T17 732 aa4.7□□□□□ -1.66
HMGB3P8-201ENST00000449709 KLF16Q9BXK1 252 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P8-201ENST00000449709 ZFAND3Q9H8U3 227 aa4.7□□□□□ -1.66
HMGB3P8-201ENST00000449709 ZNF358Q9NW07 568 aa4.7□□□□□ -1.66
HMGB3P8-201ENST00000449709 ABCC9O60706 1549 aa4.7□□□□□ -1.66
HMGB3P8-201ENST00000449709 EIF4G1Q04637 1599 aaKnown RBP4.7□□□□□ -1.66
HMGB3P8-201ENST00000449709 DHX57Q6P158 1386 aaKnown RBP4.69□□□□□ -1.66
HMGB3P8-201ENST00000449709 TMEM229AB2RXF0 380 aa4.69□□□□□ -1.66
HMGB3P8-201ENST00000449709 FOXO3O43524 673 aa4.69□□□□□ -1.66
HMGB3P8-201ENST00000449709 MYCP01106 439 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P8-201ENST00000449709 NR3C2P08235 984 aa4.69□□□□□ -1.66
HMGB3P8-201ENST00000449709 SCTRP47872 440 aa4.69□□□□□ -1.66
HMGB3P8-201ENST00000449709 NAA30Q147X3 362 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P8-201ENST00000449709 EAPPQ56P03 285 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P8-201ENST00000449709 GAS2L2Q8NHY3 880 aa4.69□□□□□ -1.66
HMGB3P8-201ENST00000449709 HELQQ8TDG4 1101 aa4.69□□□□□ -1.66
HMGB3P8-201ENST00000449709 SECISBP2LQ93073 1101 aaKnown RBP4.69□□□□□ -1.66
HMGB3P8-201ENST00000449709 CDK15Q96Q40 435 aa4.69□□□□□ -1.66
HMGB3P8-201ENST00000449709 RBCK1Q9BYM8 510 aa4.69□□□□□ -1.66
HMGB3P8-201ENST00000449709 ERBB4Q15303 1308 aa4.69□□□□□ -1.66
HMGB3P8-201ENST00000449709 VIRMAQ69YN4 1812 aaKnown RBP4.68□□□□□ -1.66
HMGB3P8-201ENST00000449709 H3BM21 787 aa4.68□□□□□ -1.66
HMGB3P8-201ENST00000449709 ZIC2O95409 532 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P8-201ENST00000449709 GRM5P41594 1212 aa4.68□□□□□ -1.66
HMGB3P8-201ENST00000449709 SCNN1DP51172 638 aa4.68□□□□□ -1.66
HMGB3P8-201ENST00000449709 DMTNQ08495 405 aa4.68□□□□□ -1.66
HMGB3P8-201ENST00000449709 TMC7Q7Z402 723 aa4.68□□□□□ -1.66
HMGB3P8-201ENST00000449709 FRAT1Q92837 279 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P8-201ENST00000449709 ITPKCQ96DU7 683 aa4.68□□□□□ -1.66
HMGB3P8-201ENST00000449709 KCTD15Q96SI1 283 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P8-201ENST00000449709 ERVH48-1M5A8F1 160 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms