RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 BAG6P46379 1132 aa18.79■□□□□ 0.6
SHANK2-210ENST00000449116 TXNRD1Q16881 649 aa18.79■□□□□ 0.6
SHANK2-210ENST00000449116 SSH1Q8WYL5 1049 aa18.79■□□□□ 0.6
SHANK2-210ENST00000449116 STK31Q9BXU1 1019 aa18.79■□□□□ 0.6
SHANK2-210ENST00000449116 ERBB4Q15303 1308 aa18.78■□□□□ 0.6
SHANK2-210ENST00000449116 HMGB2P26583 209 aaKnown RBP18.78■□□□□ 0.6
SHANK2-210ENST00000449116 KCNQ4P56696 695 aa18.78■□□□□ 0.6
SHANK2-210ENST00000449116 SMC4Q9NTJ3 1288 aa18.78■□□□□ 0.6
SHANK2-210ENST00000449116 TCERG1O14776 1098 aaKnown RBP18.77■□□□□ 0.6
SHANK2-210ENST00000449116 PROM2Q8N271 834 aa18.77■□□□□ 0.6
SHANK2-210ENST00000449116 LINC00116Q8NCU8 138 aa18.77■□□□□ 0.6
SHANK2-210ENST00000449116 LRRC4BQ9NT99 713 aa18.77■□□□□ 0.6
SHANK2-210ENST00000449116 CHPF2Q9P2E5 772 aa18.77■□□□□ 0.6
SHANK2-210ENST00000449116 DBF4Q9UBU7 674 aaPredicted RBP18.77■□□□□ 0.6
SHANK2-210ENST00000449116 COL5A3P25940 1745 aaPredicted RBP18.77■□□□□ 0.59
SHANK2-210ENST00000449116 A1BGP04217 495 aa18.76■□□□□ 0.59
SHANK2-210ENST00000449116 EN1Q05925 392 aaPredicted RBP18.76■□□□□ 0.59
SHANK2-210ENST00000449116 MRPL50Q8N5N7 158 aaKnown RBP18.76■□□□□ 0.59
SHANK2-210ENST00000449116 CAMKK2Q96RR4 588 aa18.76■□□□□ 0.59
SHANK2-210ENST00000449116 BCL2L13Q9BXK5 485 aa18.76■□□□□ 0.59
SHANK2-210ENST00000449116 DDX21Q9NR30 783 aaKnown RBP eCLIP18.76■□□□□ 0.59
SHANK2-210ENST00000449116 CNTNAP4Q9C0A0 1308 aa18.75■□□□□ 0.59
SHANK2-210ENST00000449116 BCAR3O75815 825 aa18.75■□□□□ 0.59
SHANK2-210ENST00000449116 SLC4A2P04920 1241 aa18.75■□□□□ 0.59
SHANK2-210ENST00000449116 CRKLP46109 303 aaKnown RBP18.75■□□□□ 0.59
SHANK2-210ENST00000449116 BRPF1P55201 1214 aaPredicted RBP18.75■□□□□ 0.59
SHANK2-210ENST00000449116 PDIA6Q15084 440 aa18.75■□□□□ 0.59
SHANK2-210ENST00000449116 CCDC87Q9NVE4 849 aa18.75■□□□□ 0.59
SHANK2-210ENST00000449116 NBPF26B4DH59 902 aa18.74■□□□□ 0.59
SHANK2-210ENST00000449116 EZH2Q15910 746 aaKnown RBP18.74■□□□□ 0.59
SHANK2-210ENST00000449116 RC3H1Q5TC82 1133 aaKnown RBP18.74■□□□□ 0.59
SHANK2-210ENST00000449116 NBPF14Q5TI25 921 aa18.74■□□□□ 0.59
SHANK2-210ENST00000449116 NBPF10Q6P3W6 841 aaKnown RBP18.74■□□□□ 0.59
SHANK2-210ENST00000449116 NBPF15Q8N660 670 aa18.74■□□□□ 0.59
SHANK2-210ENST00000449116 UPF1Q92900 1129 aaKnown RBP eCLIP18.74■□□□□ 0.59
SHANK2-210ENST00000449116 TAF1LQ8IZX4 1826 aa18.73■□□□□ 0.59
SHANK2-210ENST00000449116 PIP4K2AP48426 406 aaPredicted RBP18.73■□□□□ 0.59
SHANK2-210ENST00000449116 PROSER3Q2NL68 480 aa18.73■□□□□ 0.59
SHANK2-210ENST00000449116 INTS5Q6P9B9 1019 aaKnown RBP18.73■□□□□ 0.59
SHANK2-210ENST00000449116 DEFB132Q7Z7B7 95 aa18.73■□□□□ 0.59
SHANK2-210ENST00000449116 HYPKQ9NX55 129 aa18.73■□□□□ 0.59
SHANK2-210ENST00000449116 ZBTB1Q9Y2K1 713 aa18.73■□□□□ 0.59
SHANK2-210ENST00000449116 ANXA1P04083 346 aa18.72■□□□□ 0.59
SHANK2-210ENST00000449116 MYL6BP14649 208 aa18.72■□□□□ 0.59
SHANK2-210ENST00000449116 CANXP27824 592 aaKnown RBP18.72■□□□□ 0.59
SHANK2-210ENST00000449116 RREB1Q92766 1687 aa18.72■□□□□ 0.59
SHANK2-210ENST00000449116 KIF16BQ96L93 1317 aa18.72■□□□□ 0.59
SHANK2-210ENST00000449116 C4BP0C0L5 1744 aa18.71■□□□□ 0.59
SHANK2-210ENST00000449116 IL6STP40189 918 aaPredicted RBP18.71■□□□□ 0.59
SHANK2-210ENST00000449116 LRP10Q7Z4F1 713 aa18.71■□□□□ 0.59
SHANK2-210ENST00000449116 CACNA1FO60840 1977 aa18.7■□□□□ 0.58
SHANK2-210ENST00000449116 FLIIQ13045 1269 aa18.7■□□□□ 0.58
SHANK2-210ENST00000449116 G2E3Q7L622 706 aa18.7■□□□□ 0.58
SHANK2-210ENST00000449116 AK7Q96M32 723 aa18.7■□□□□ 0.58
SHANK2-210ENST00000449116 PHAXQ9H814 394 aaKnown RBP18.7■□□□□ 0.58
SHANK2-210ENST00000449116 NOB1Q9ULX3 412 aaKnown RBP18.69■□□□□ 0.58
SHANK2-210ENST00000449116 MYH14Q7Z406 1995 aaKnown RBP18.69■□□□□ 0.58
SHANK2-210ENST00000449116 GNPATO15228 680 aa18.68■□□□□ 0.58
SHANK2-210ENST00000449116 IPO8O15397 1037 aaKnown RBP18.68■□□□□ 0.58
SHANK2-210ENST00000449116 EIF5P55010 431 aaKnown RBP18.68■□□□□ 0.58
SHANK2-210ENST00000449116 NPM2Q86SE8 214 aaKnown RBP18.68■□□□□ 0.58
SHANK2-210ENST00000449116 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.68■□□□□ 0.58
SHANK2-210ENST00000449116 FRAT1Q92837 279 aaPredicted RBP18.68■□□□□ 0.58
SHANK2-210ENST00000449116 ZNF330Q9Y3S2 320 aaPredicted RBP18.68■□□□□ 0.58
SHANK2-210ENST00000449116 PTPRCP08575 1304 aa18.68■□□□□ 0.58
SHANK2-210ENST00000449116 RPS6KA4O75676 772 aa18.67■□□□□ 0.58
SHANK2-210ENST00000449116 ZKSCAN2Q63HK3 967 aa18.67■□□□□ 0.58
SHANK2-210ENST00000449116 COPS6Q7L5N1 327 aa18.67■□□□□ 0.58
SHANK2-210ENST00000449116 XAGE3Q8WTP9 111 aa18.67■□□□□ 0.58
SHANK2-210ENST00000449116 ARHGAP45Q92619 1136 aa18.67■□□□□ 0.58
SHANK2-210ENST00000449116 RTCBQ9Y3I0 505 aaKnown RBP18.67■□□□□ 0.58
SHANK2-210ENST00000449116 SUPT16HQ9Y5B9 1047 aaKnown RBP18.67■□□□□ 0.58
SHANK2-210ENST00000449116 RRP1P56182 461 aaKnown RBP18.66■□□□□ 0.58
SHANK2-210ENST00000449116 AIMP1Q12904 312 aaKnown RBP18.66■□□□□ 0.58
SHANK2-210ENST00000449116 FKBP5Q13451 457 aaPredicted RBP18.66■□□□□ 0.58
SHANK2-210ENST00000449116 AKT1S1Q96B36 256 aa18.66■□□□□ 0.58
SHANK2-210ENST00000449116 COL15A1P39059 1388 aa18.66■□□□□ 0.58
SHANK2-210ENST00000449116 A0A087WZG4 1122 aa18.65■□□□□ 0.58
SHANK2-210ENST00000449116 DDX58O95786 925 aaKnown RBP18.65■□□□□ 0.58
SHANK2-210ENST00000449116 ATF7IPQ6VMQ6 1270 aa18.65■□□□□ 0.58
SHANK2-210ENST00000449116 API5Q9BZZ5 524 aaKnown RBP18.65■□□□□ 0.58
SHANK2-210ENST00000449116 RNF123Q5XPI4 1314 aa18.65■□□□□ 0.58
SHANK2-210ENST00000449116 NUP188Q5SRE5 1749 aa18.64■□□□□ 0.57
SHANK2-210ENST00000449116 ZNF827Q17R98 1081 aa18.64■□□□□ 0.57
SHANK2-210ENST00000449116 KIF6Q6ZMV9 814 aa18.64■□□□□ 0.57
SHANK2-210ENST00000449116 TTLL7Q6ZT98 887 aa18.64■□□□□ 0.57
SHANK2-210ENST00000449116 PLIN1O60240 522 aa18.63■□□□□ 0.57
SHANK2-210ENST00000449116 TRIM27P14373 513 aa18.63■□□□□ 0.57
SHANK2-210ENST00000449116 ADRA2BP18089 450 aa18.63■□□□□ 0.57
SHANK2-210ENST00000449116 SSFA2P28290 1259 aa18.63■□□□□ 0.57
SHANK2-210ENST00000449116 STK32BQ9NY57 414 aa18.63■□□□□ 0.57
SHANK2-210ENST00000449116 TRAPPC3LQ5T215 181 aa18.62■□□□□ 0.57
SHANK2-210ENST00000449116 KSR2Q6VAB6 950 aa18.62■□□□□ 0.57
SHANK2-210ENST00000449116 ANKRD13DQ6ZTN6 518 aa18.62■□□□□ 0.57
SHANK2-210ENST00000449116 AMIGO3Q86WK7 504 aa18.62■□□□□ 0.57
SHANK2-210ENST00000449116 DZIP3Q86Y13 1208 aaKnown RBP18.62■□□□□ 0.57
SHANK2-210ENST00000449116 PLBD2Q8NHP8 589 aa18.62■□□□□ 0.57
SHANK2-210ENST00000449116 ARXQ96QS3 562 aa18.62■□□□□ 0.57
SHANK2-210ENST00000449116 ANO8Q9HCE9 1232 aaPredicted RBP18.62■□□□□ 0.57
SHANK2-210ENST00000449116 TFCP2L1Q9NZI6 479 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms