RNA–Protein interactions for RNA: ENST00000447016.6

PRDM15-206, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 4,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-206ENST00000447016 TAOK3Q9H2K8 898 aa15.45■□□□□ 0.06
PRDM15-206ENST00000447016 LRP2BPQ9P2M1 347 aa15.45■□□□□ 0.06
PRDM15-206ENST00000447016 IDH1O75874 414 aaKnown RBP15.45■□□□□ 0.06
PRDM15-206ENST00000447016 KANK3Q6NY19 840 aa15.45■□□□□ 0.06
PRDM15-206ENST00000447016 PTPRCP08575 1304 aa15.45■□□□□ 0.06
PRDM15-206ENST00000447016 HS1BP3Q53T59 392 aa15.44■□□□□ 0.06
PRDM15-206ENST00000447016 TMC6Q7Z403 805 aa15.44■□□□□ 0.06
PRDM15-206ENST00000447016 RAI14Q9P0K7 980 aa15.44■□□□□ 0.06
PRDM15-206ENST00000447016 PRXQ9BXM0 1461 aa15.44■□□□□ 0.06
PRDM15-206ENST00000447016 RNF187Q5TA31 235 aaPredicted RBP15.44■□□□□ 0.06
PRDM15-206ENST00000447016 CTR9Q6PD62 1173 aa15.44■□□□□ 0.06
PRDM15-206ENST00000447016 GIGYF2Q6Y7W6 1299 aaKnown RBP15.44■□□□□ 0.06
PRDM15-206ENST00000447016 OSCARQ8IYS5 282 aa15.44■□□□□ 0.06
PRDM15-206ENST00000447016 TBC1D9Q6ZT07 1266 aa15.44■□□□□ 0.06
PRDM15-206ENST00000447016 NAIPQ13075 1403 aa15.43■□□□□ 0.06
PRDM15-206ENST00000447016 SPECC1LQ69YQ0 1117 aa15.43■□□□□ 0.06
PRDM15-206ENST00000447016 ZSCAN23Q3MJ62 389 aa15.43■□□□□ 0.06
PRDM15-206ENST00000447016 SPECC1Q5M775 1068 aa15.43■□□□□ 0.06
PRDM15-206ENST00000447016 CCDC113Q9H0I3 377 aa15.43■□□□□ 0.06
PRDM15-206ENST00000447016 SMARCA5O60264 1052 aaPredicted RBP15.43■□□□□ 0.06
PRDM15-206ENST00000447016 IVLP07476 585 aa15.43■□□□□ 0.06
PRDM15-206ENST00000447016 EVI5LQ96CN4 794 aa15.43■□□□□ 0.06
PRDM15-206ENST00000447016 ZSCAN16Q9H4T2 348 aaPredicted RBP15.43■□□□□ 0.06
PRDM15-206ENST00000447016 GRIN2BQ13224 1484 aa15.42■□□□□ 0.06
PRDM15-206ENST00000447016 CTCFLQ8NI51 663 aaPredicted RBP15.42■□□□□ 0.06
PRDM15-206ENST00000447016 HMG20BQ9P0W2 317 aa15.42■□□□□ 0.06
PRDM15-206ENST00000447016 SRRTQ9BXP5 876 aaKnown RBP15.42■□□□□ 0.06
PRDM15-206ENST00000447016 RNF41Q9H4P4 317 aaPredicted RBP15.42■□□□□ 0.06
PRDM15-206ENST00000447016 GJB2P29033 226 aa15.42■□□□□ 0.06
PRDM15-206ENST00000447016 ZNF76P36508 570 aa15.42■□□□□ 0.06
PRDM15-206ENST00000447016 LMAN1P49257 510 aa15.42■□□□□ 0.06
PRDM15-206ENST00000447016 KRI1Q8N9T8 703 aaKnown RBP15.42■□□□□ 0.06
PRDM15-206ENST00000447016 GSTTP1A0A1W2PQM5 241 aa15.41■□□□□ 0.06
PRDM15-206ENST00000447016 IFIT1P09914 478 aaKnown RBP15.41■□□□□ 0.06
PRDM15-206ENST00000447016 TRIM27P14373 513 aa15.41■□□□□ 0.06
PRDM15-206ENST00000447016 IGHMBP2P38935 993 aaKnown RBP15.41■□□□□ 0.06
PRDM15-206ENST00000447016 BOLA2Q9H3K6 86 aa15.41■□□□□ 0.06
PRDM15-206ENST00000447016 CCDC61Q9Y6R9 512 aa15.41■□□□□ 0.06
PRDM15-206ENST00000447016 TUBB4BP68371 445 aa15.41■□□□□ 0.06
PRDM15-206ENST00000447016 CCDC178Q5BJE1 867 aa15.41■□□□□ 0.06
PRDM15-206ENST00000447016 FAM114A1Q8IWE2 563 aa15.41■□□□□ 0.06
PRDM15-206ENST00000447016 NAPBQ9H115 298 aa15.41■□□□□ 0.06
PRDM15-206ENST00000447016 NOLC1Q14978 699 aaKnown RBP eCLIP15.41■□□□□ 0.06
PRDM15-206ENST00000447016 SEC63Q9UGP8 760 aaKnown RBP15.41■□□□□ 0.06
PRDM15-206ENST00000447016 CCDC141Q6ZP82 1450 aa15.41■□□□□ 0.06
PRDM15-206ENST00000447016 ZKSCAN5Q9Y2L8 839 aa15.41■□□□□ 0.06
PRDM15-206ENST00000447016 C11orf95C9JLR9 678 aaPredicted RBP15.4■□□□□ 0.06
PRDM15-206ENST00000447016 CKAP4Q07065 602 aaKnown RBP15.4■□□□□ 0.06
PRDM15-206ENST00000447016 FAM69CQ0P6D2 419 aa15.4■□□□□ 0.06
PRDM15-206ENST00000447016 ZMYND15Q9H091 742 aa15.4■□□□□ 0.06
PRDM15-206ENST00000447016 ECHDC1Q9NTX5 307 aa15.4■□□□□ 0.06
PRDM15-206ENST00000447016 HDAC1Q13547 482 aaPredicted RBP15.4■□□□□ 0.06
PRDM15-206ENST00000447016 TMEM266Q2M3C6 531 aa15.4■□□□□ 0.06
PRDM15-206ENST00000447016 CYB5RLQ6IPT4 315 aa15.4■□□□□ 0.06
PRDM15-206ENST00000447016 IL16Q14005 1332 aa15.4■□□□□ 0.06
PRDM15-206ENST00000447016 STAMBPO95630 424 aa15.4■□□□□ 0.06
PRDM15-206ENST00000447016 SSR1P43307 286 aaKnown RBP15.4■□□□□ 0.06
PRDM15-206ENST00000447016 GNG11P61952 73 aa15.4■□□□□ 0.06
PRDM15-206ENST00000447016 RRS1Q15050 365 aaKnown RBP15.4■□□□□ 0.06
PRDM15-206ENST00000447016 TDRD12Q587J7 1177 aaKnown RBP15.4■□□□□ 0.06
PRDM15-206ENST00000447016 ARFGAP3Q9NP61 516 aa15.4■□□□□ 0.06
PRDM15-206ENST00000447016 SLC12A7Q9Y666 1083 aa15.4■□□□□ 0.06
PRDM15-206ENST00000447016 HECW1Q76N89 1606 aa15.4■□□□□ 0.06
PRDM15-206ENST00000447016 SSRP1Q08945 709 aaKnown RBP15.39■□□□□ 0.06
PRDM15-206ENST00000447016 CCDC102BQ68D86 513 aa15.39■□□□□ 0.06
PRDM15-206ENST00000447016 FAM200AQ8TCP9 573 aa15.39■□□□□ 0.06
PRDM15-206ENST00000447016 NCOA1Q15788 1441 aa15.39■□□□□ 0.05
PRDM15-206ENST00000447016 ZNF213O14771 459 aa15.39■□□□□ 0.05
PRDM15-206ENST00000447016 HLTFQ14527 1009 aaKnown RBP eCLIP15.39■□□□□ 0.05
PRDM15-206ENST00000447016 TAF7Q15545 349 aaPredicted RBP15.39■□□□□ 0.05
PRDM15-206ENST00000447016 METTL24Q5JXM2 366 aa15.39■□□□□ 0.05
PRDM15-206ENST00000447016 IQCA1Q86XH1 822 aa15.39■□□□□ 0.05
PRDM15-206ENST00000447016 SNX21Q969T3 373 aa15.39■□□□□ 0.05
PRDM15-206ENST00000447016 XRCC6P12956 609 aaKnown RBP eCLIP15.39■□□□□ 0.05
PRDM15-206ENST00000447016 GOLIM4O00461 696 aa15.39■□□□□ 0.05
PRDM15-206ENST00000447016 ANAPC15P60006 121 aa15.39■□□□□ 0.05
PRDM15-206ENST00000447016 AMPD3Q01432 767 aa15.39■□□□□ 0.05
PRDM15-206ENST00000447016 TTC22Q5TAA0 569 aa15.39■□□□□ 0.05
PRDM15-206ENST00000447016 HCLS1P14317 486 aaPredicted RBP15.38■□□□□ 0.05
PRDM15-206ENST00000447016 HOOK3Q86VS8 718 aa15.38■□□□□ 0.05
PRDM15-206ENST00000447016 THEMISQ8N1K5 641 aaPredicted RBP15.38■□□□□ 0.05
PRDM15-206ENST00000447016 CCDC12Q8WUD4 166 aaPredicted RBP15.38■□□□□ 0.05
PRDM15-206ENST00000447016 ZHX1Q9UKY1 873 aaPredicted RBP15.38■□□□□ 0.05
PRDM15-206ENST00000447016 SUPT6HQ7KZ85 1726 aaKnown RBP15.38■□□□□ 0.05
PRDM15-206ENST00000447016 CPLX3Q8WVH0 158 aa15.38■□□□□ 0.05
PRDM15-206ENST00000447016 GTPBP4Q9BZE4 634 aaKnown RBP15.38■□□□□ 0.05
PRDM15-206ENST00000447016 DNAI2Q9GZS0 605 aa15.38■□□□□ 0.05
PRDM15-206ENST00000447016 ZSCAN22P10073 491 aaPredicted RBP15.38■□□□□ 0.05
PRDM15-206ENST00000447016 TRIM21P19474 475 aaKnown RBP15.38■□□□□ 0.05
PRDM15-206ENST00000447016 MAP3K12Q12852 859 aa15.38■□□□□ 0.05
PRDM15-206ENST00000447016 MAPK8IP2Q13387 824 aaPredicted RBP15.38■□□□□ 0.05
PRDM15-206ENST00000447016 GDPD2Q9HCC8 539 aa15.38■□□□□ 0.05
PRDM15-206ENST00000447016 NSD2O96028 1365 aa15.38■□□□□ 0.05
PRDM15-206ENST00000447016 GOLGA8BA8MQT2 603 aa15.38■□□□□ 0.05
PRDM15-206ENST00000447016 CEP112Q8N8E3 955 aa15.38■□□□□ 0.05
PRDM15-206ENST00000447016 DNAAF4Q8WXU2 420 aa15.38■□□□□ 0.05
PRDM15-206ENST00000447016 MTIF2P46199 727 aaKnown RBP15.37■□□□□ 0.05
PRDM15-206ENST00000447016 TNIP1Q15025 636 aa15.37■□□□□ 0.05
PRDM15-206ENST00000447016 TFIP11Q9UBB9 837 aaKnown RBP15.37■□□□□ 0.05
PRDM15-206ENST00000447016 GOLGA8AA7E2F4 631 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms