RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 BEND3Q5T5X7 828 aa19.94■□□□□ 0.78
PIKFYVE-206ENST00000443896 RABEP1Q15276 862 aa19.94■□□□□ 0.78
PIKFYVE-206ENST00000443896 DNAAF4Q8WXU2 420 aa19.94■□□□□ 0.78
PIKFYVE-206ENST00000443896 TMEM94Q12767 1356 aa19.94■□□□□ 0.78
PIKFYVE-206ENST00000443896 ATF3P18847 181 aa19.94■□□□□ 0.78
PIKFYVE-206ENST00000443896 ERBB4Q15303 1308 aa19.93■□□□□ 0.78
PIKFYVE-206ENST00000443896 PI4KAP2A4QPH2 592 aa19.93■□□□□ 0.78
PIKFYVE-206ENST00000443896 MX1P20591 662 aa19.93■□□□□ 0.78
PIKFYVE-206ENST00000443896 PI4KAP1Q8N8J0 262 aa19.93■□□□□ 0.78
PIKFYVE-206ENST00000443896 DBF4Q9UBU7 674 aaPredicted RBP19.93■□□□□ 0.78
PIKFYVE-206ENST00000443896 STRCP1A6NGW2 1772 aa19.93■□□□□ 0.78
PIKFYVE-206ENST00000443896 POLA2Q14181 598 aa19.93■□□□□ 0.78
PIKFYVE-206ENST00000443896 STAP2Q9UGK3 403 aa19.93■□□□□ 0.78
PIKFYVE-206ENST00000443896 ADCY9O60503 1353 aa19.92■□□□□ 0.78
PIKFYVE-206ENST00000443896 GIGYF1O75420 1035 aaPredicted RBP19.92■□□□□ 0.78
PIKFYVE-206ENST00000443896 REC8O95072 547 aa19.92■□□□□ 0.78
PIKFYVE-206ENST00000443896 ZC3H6P61129 1189 aaKnown RBP19.92■□□□□ 0.78
PIKFYVE-206ENST00000443896 ERC2O15083 957 aa19.91■□□□□ 0.78
PIKFYVE-206ENST00000443896 PPP1R42Q7Z4L9 355 aa19.9■□□□□ 0.78
PIKFYVE-206ENST00000443896 RAB11FIP3O75154 756 aa19.9■□□□□ 0.78
PIKFYVE-206ENST00000443896 ANXA1P04083 346 aa19.9■□□□□ 0.78
PIKFYVE-206ENST00000443896 NBPF7P0C2Y1 421 aaPredicted RBP19.9■□□□□ 0.78
PIKFYVE-206ENST00000443896 TSHZ3Q63HK5 1081 aa19.89■□□□□ 0.78
PIKFYVE-206ENST00000443896 AOX1Q06278 1338 aa19.89■□□□□ 0.77
PIKFYVE-206ENST00000443896 COL18A1P39060 1754 aa19.89■□□□□ 0.77
PIKFYVE-206ENST00000443896 ABCC6O95255 1503 aa19.88■□□□□ 0.77
PIKFYVE-206ENST00000443896 CRYBG1Q9Y4K1 1723 aa19.88■□□□□ 0.77
PIKFYVE-206ENST00000443896 RAB3GAP1Q15042 981 aa19.87■□□□□ 0.77
PIKFYVE-206ENST00000443896 DDX17Q92841 729 aaKnown RBP19.87■□□□□ 0.77
PIKFYVE-206ENST00000443896 ESPNB1AK53 854 aa19.87■□□□□ 0.77
PIKFYVE-206ENST00000443896 RAPGEF4Q8WZA2 1011 aa19.87■□□□□ 0.77
PIKFYVE-206ENST00000443896 SRGAP3O43295 1099 aa19.86■□□□□ 0.77
PIKFYVE-206ENST00000443896 PROSER3Q2NL68 480 aa19.86■□□□□ 0.77
PIKFYVE-206ENST00000443896 SURF6O75683 361 aaKnown RBP19.86■□□□□ 0.77
PIKFYVE-206ENST00000443896 NPHP3Q7Z494 1330 aa19.86■□□□□ 0.77
PIKFYVE-206ENST00000443896 TNS3Q68CZ2 1445 aa19.86■□□□□ 0.77
PIKFYVE-206ENST00000443896 CADPS2Q86UW7 1296 aa19.86■□□□□ 0.77
PIKFYVE-206ENST00000443896 PRDM10Q9NQV6 1147 aa19.86■□□□□ 0.77
PIKFYVE-206ENST00000443896 SCN11AQ9UI33 1791 aa19.85■□□□□ 0.77
PIKFYVE-206ENST00000443896 PRAMEF22A3QJZ6 481 aa19.85■□□□□ 0.77
PIKFYVE-206ENST00000443896 ALDH1L1O75891 902 aa19.85■□□□□ 0.77
PIKFYVE-206ENST00000443896 KSR2Q6VAB6 950 aa19.85■□□□□ 0.77
PIKFYVE-206ENST00000443896 TNPO1Q92973 898 aaKnown RBP19.85■□□□□ 0.77
PIKFYVE-206ENST00000443896 NLRP2Q9NX02 1062 aa19.85■□□□□ 0.77
PIKFYVE-206ENST00000443896 KDM6AO15550 1401 aaPredicted RBP19.85■□□□□ 0.77
PIKFYVE-206ENST00000443896 PLEKHG2Q9H7P9 1386 aa19.85■□□□□ 0.77
PIKFYVE-206ENST00000443896 DDX11L8A8MPP1 907 aa19.85■□□□□ 0.77
PIKFYVE-206ENST00000443896 ESYT1Q9BSJ8 1104 aa19.85■□□□□ 0.77
PIKFYVE-206ENST00000443896 HYPKQ9NX55 129 aa19.85■□□□□ 0.77
PIKFYVE-206ENST00000443896 FAM13BQ9NYF5 915 aa19.85■□□□□ 0.77
PIKFYVE-206ENST00000443896 MAP3K2Q9Y2U5 619 aa19.85■□□□□ 0.77
PIKFYVE-206ENST00000443896 RHPN1Q8TCX5 695 aa19.84■□□□□ 0.77
PIKFYVE-206ENST00000443896 TRIM44Q96DX7 344 aaPredicted RBP19.84■□□□□ 0.77
PIKFYVE-206ENST00000443896 IL1RAPL2Q9NP60 686 aa19.84■□□□□ 0.77
PIKFYVE-206ENST00000443896 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.84■□□□□ 0.777e-7■■□□□ 14.2
PIKFYVE-206ENST00000443896 ZHX1Q9UKY1 873 aaPredicted RBP19.84■□□□□ 0.77
PIKFYVE-206ENST00000443896 MTX1Q13505 466 aa19.84■□□□□ 0.77
PIKFYVE-206ENST00000443896 KIF1BPQ96EK5 621 aa19.84■□□□□ 0.77
PIKFYVE-206ENST00000443896 DNAJC5Q9H3Z4 198 aa19.84■□□□□ 0.77
PIKFYVE-206ENST00000443896 MEGF6O75095 1541 aa19.84■□□□□ 0.77
PIKFYVE-206ENST00000443896 TATP17735 454 aaPredicted RBP19.83■□□□□ 0.77
PIKFYVE-206ENST00000443896 CHMLP26374 656 aa19.83■□□□□ 0.77
PIKFYVE-206ENST00000443896 FOXD4L1Q9NU39 408 aa19.83■□□□□ 0.77
PIKFYVE-206ENST00000443896 PHKG2P15735 406 aa19.83■□□□□ 0.76
PIKFYVE-206ENST00000443896 SLC52A2Q9HAB3 445 aa19.83■□□□□ 0.76
PIKFYVE-206ENST00000443896 SPG7Q9UQ90 795 aa19.82■□□□□ 0.76
PIKFYVE-206ENST00000443896 TRIM6-TRIM34B2RNG4 842 aa19.82■□□□□ 0.76
PIKFYVE-206ENST00000443896 ZNF790Q6PG37 636 aa19.82■□□□□ 0.76
PIKFYVE-206ENST00000443896 RILPL2Q969X0 211 aa19.82■□□□□ 0.76
PIKFYVE-206ENST00000443896 DDX21Q9NR30 783 aaKnown RBP eCLIP19.82■□□□□ 0.76
PIKFYVE-206ENST00000443896 ST18O60284 1047 aa19.82■□□□□ 0.76
PIKFYVE-206ENST00000443896 HSP90AB4PQ58FF6 505 aa19.82■□□□□ 0.76
PIKFYVE-206ENST00000443896 KIAA1211Q6ZU35 1233 aa19.82■□□□□ 0.76
PIKFYVE-206ENST00000443896 TRAK2O60296 914 aa19.81■□□□□ 0.76
PIKFYVE-206ENST00000443896 PDIA6Q15084 440 aa19.81■□□□□ 0.76
PIKFYVE-206ENST00000443896 UNC5CLQ8IV45 518 aa19.81■□□□□ 0.76
PIKFYVE-206ENST00000443896 NUTM1Q86Y26 1132 aa19.8■□□□□ 0.76
PIKFYVE-206ENST00000443896 GBP4Q96PP9 640 aa19.8■□□□□ 0.76
PIKFYVE-206ENST00000443896 PRDM4Q9UKN5 801 aa19.8■□□□□ 0.76
PIKFYVE-206ENST00000443896 SPATA31A3Q5VYP0 1347 aa19.8■□□□□ 0.76
PIKFYVE-206ENST00000443896 CABLES1Q8TDN4 633 aa19.8■□□□□ 0.76
PIKFYVE-206ENST00000443896 PI4K2BQ8TCG2 481 aa19.8■□□□□ 0.76
PIKFYVE-206ENST00000443896 HDAC5Q9UQL6 1122 aa19.8■□□□□ 0.76
PIKFYVE-206ENST00000443896 C5P01031 1676 aa19.79■□□□□ 0.76
PIKFYVE-206ENST00000443896 C9orf78Q9NZ63 289 aaPredicted RBP19.79■□□□□ 0.76
PIKFYVE-206ENST00000443896 MRC1P22897 1456 aa19.79■□□□□ 0.76
PIKFYVE-206ENST00000443896 CPDO75976 1380 aa19.79■□□□□ 0.76
PIKFYVE-206ENST00000443896 DDX58O95786 925 aaKnown RBP19.79■□□□□ 0.76
PIKFYVE-206ENST00000443896 IFNL2Q8IZJ0 200 aa19.79■□□□□ 0.76
PIKFYVE-206ENST00000443896 PDCL3Q9H2J4 239 aa19.79■□□□□ 0.76
PIKFYVE-206ENST00000443896 LINS1Q8NG48 757 aa19.78■□□□□ 0.76
PIKFYVE-206ENST00000443896 CSB-PGBD3P0DP91 1061 aa19.78■□□□□ 0.76
PIKFYVE-206ENST00000443896 SLC39A6Q13433 755 aa19.78■□□□□ 0.76
PIKFYVE-206ENST00000443896 CWF19L2Q2TBE0 894 aaKnown RBP19.78■□□□□ 0.76
PIKFYVE-206ENST00000443896 UTYO14607 1347 aa19.78■□□□□ 0.76
PIKFYVE-206ENST00000443896 PKD1L3Q7Z443 1732 aa19.78■□□□□ 0.76
PIKFYVE-206ENST00000443896 CLEC17AQ6ZS10 378 aa19.77■□□□□ 0.76
PIKFYVE-206ENST00000443896 NFATC2IPQ8NCF5 419 aa19.77■□□□□ 0.76
PIKFYVE-206ENST00000443896 USP42Q9H9J4 1324 aaKnown RBP19.77■□□□□ 0.76
PIKFYVE-206ENST00000443896 CHRNA2Q15822 529 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms