RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 JARID2Q92833 1246 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC9-202ENST00000438773 SMC3Q9UQE7 1217 aa13.92□□□□□ -0.18
TRAPPC9-202ENST00000438773 NEXMIFQ5QGS0 1516 aa13.92□□□□□ -0.18
TRAPPC9-202ENST00000438773 VIRMAQ69YN4 1812 aaKnown RBP13.92□□□□□ -0.18
TRAPPC9-202ENST00000438773 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC9-202ENST00000438773 H3BQV1 296 aa13.92□□□□□ -0.18
TRAPPC9-202ENST00000438773 IL2RBP14784 551 aa13.92□□□□□ -0.18
TRAPPC9-202ENST00000438773 IFFO2Q5TF58 517 aa13.92□□□□□ -0.18
TRAPPC9-202ENST00000438773 TBC1D9Q6ZT07 1266 aa13.91□□□□□ -0.18
TRAPPC9-202ENST00000438773 IL17REQ8NFR9 667 aa13.91□□□□□ -0.18
TRAPPC9-202ENST00000438773 DCAF5Q96JK2 942 aa13.91□□□□□ -0.18
TRAPPC9-202ENST00000438773 ATP6V1DQ9Y5K8 247 aa13.91□□□□□ -0.18
TRAPPC9-202ENST00000438773 CLTCQ00610 1675 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-202ENST00000438773 CCDC158Q5M9N0 1113 aa13.91□□□□□ -0.18
TRAPPC9-202ENST00000438773 KSR2Q6VAB6 950 aa13.91□□□□□ -0.18
TRAPPC9-202ENST00000438773 HMGB2P26583 209 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-202ENST00000438773 TRDNQ13061 729 aa13.91□□□□□ -0.18
TRAPPC9-202ENST00000438773 CEP85Q6P2H3 762 aa13.91□□□□□ -0.18
TRAPPC9-202ENST00000438773 CCDC8Q9H0W5 538 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC9-202ENST00000438773 C16orf71Q8IYS4 520 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC9-202ENST00000438773 PPP1R1BQ9UD71 204 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC9-202ENST00000438773 VPS37CA5D8V6 355 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC9-202ENST00000438773 K7ELQ4 463 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC9-202ENST00000438773 CSPP1Q1MSJ5 1256 aa13.9□□□□□ -0.18
TRAPPC9-202ENST00000438773 BOLA2Q9H3K6 86 aa13.9□□□□□ -0.18
TRAPPC9-202ENST00000438773 DCTPP1Q9H773 170 aa13.9□□□□□ -0.18
TRAPPC9-202ENST00000438773 TULP4Q9NRJ4 1543 aa13.9□□□□□ -0.18
TRAPPC9-202ENST00000438773 QRICH2Q9H0J4 1663 aa13.9□□□□□ -0.18
TRAPPC9-202ENST00000438773 RBM10P98175 930 aaKnown RBP13.9□□□□□ -0.19
TRAPPC9-202ENST00000438773 MCM2P49736 904 aa13.89□□□□□ -0.19
TRAPPC9-202ENST00000438773 VWDEQ8N2E2 1590 aa13.89□□□□□ -0.19
TRAPPC9-202ENST00000438773 MPHOSPH8Q99549 860 aa13.89□□□□□ -0.19
TRAPPC9-202ENST00000438773 FRMPD1Q5SYB0 1578 aa13.89□□□□□ -0.19
TRAPPC9-202ENST00000438773 ATP8B2P98198 1209 aa13.89□□□□□ -0.19
TRAPPC9-202ENST00000438773 SKOR2Q2VWA4 1001 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC9-202ENST00000438773 RNF214Q8ND24 703 aa13.89□□□□□ -0.19
TRAPPC9-202ENST00000438773 BABAM1Q9NWV8 329 aa13.89□□□□□ -0.19
TRAPPC9-202ENST00000438773 GPTP24298 496 aa13.89□□□□□ -0.19
TRAPPC9-202ENST00000438773 PSMA5P28066 241 aa13.89□□□□□ -0.19
TRAPPC9-202ENST00000438773 FKBP4Q02790 459 aaKnown RBP eCLIP13.89□□□□□ -0.19
TRAPPC9-202ENST00000438773 TTC39AQ5SRH9 613 aa13.89□□□□□ -0.19
TRAPPC9-202ENST00000438773 TTC22Q5TAA0 569 aa13.88□□□□□ -0.19
TRAPPC9-202ENST00000438773 RHPN1Q8TCX5 695 aa13.88□□□□□ -0.19
TRAPPC9-202ENST00000438773 FSD2A1L4K1 749 aa13.88□□□□□ -0.19
TRAPPC9-202ENST00000438773 CWF19L2Q2TBE0 894 aaKnown RBP13.88□□□□□ -0.19
TRAPPC9-202ENST00000438773 LINS1Q8NG48 757 aa13.88□□□□□ -0.19
TRAPPC9-202ENST00000438773 IGSF1Q8N6C5 1336 aa13.88□□□□□ -0.19
TRAPPC9-202ENST00000438773 PTPRMP28827 1452 aa13.88□□□□□ -0.19
TRAPPC9-202ENST00000438773 GRM8O00222 908 aa13.88□□□□□ -0.19
TRAPPC9-202ENST00000438773 ALDH1L1O75891 902 aa13.88□□□□□ -0.19
TRAPPC9-202ENST00000438773 MCTP1Q6DN14 999 aa13.88□□□□□ -0.19
TRAPPC9-202ENST00000438773 ZNF790Q6PG37 636 aa13.88□□□□□ -0.19
TRAPPC9-202ENST00000438773 RALYLQ86SE5 291 aaKnown RBP13.88□□□□□ -0.19
TRAPPC9-202ENST00000438773 SOS1Q07889 1333 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC9-202ENST00000438773 ARHGEF25Q86VW2 580 aa13.87□□□□□ -0.19
TRAPPC9-202ENST00000438773 TBC1D2BQ9UPU7 963 aa13.87□□□□□ -0.19
TRAPPC9-202ENST00000438773 PIK3C2BO00750 1634 aa13.87□□□□□ -0.19
TRAPPC9-202ENST00000438773 TEX13AQ9BXU3 409 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC9-202ENST00000438773 BTG4Q9NY30 223 aa13.87□□□□□ -0.19
TRAPPC9-202ENST00000438773 CPLX1O14810 134 aa13.87□□□□□ -0.19
TRAPPC9-202ENST00000438773 CPLX2Q6PUV4 134 aaKnown RBP13.87□□□□□ -0.19
TRAPPC9-202ENST00000438773 CHMP4CQ96CF2 233 aa13.87□□□□□ -0.19
TRAPPC9-202ENST00000438773 UPF3BQ9BZI7 483 aaKnown RBP13.87□□□□□ -0.19
TRAPPC9-202ENST00000438773 DDX21Q9NR30 783 aaKnown RBP eCLIP13.87□□□□□ -0.19
TRAPPC9-202ENST00000438773 SDSP20132 328 aa13.86□□□□□ -0.19
TRAPPC9-202ENST00000438773 PDE1AP54750 535 aa13.86□□□□□ -0.19
TRAPPC9-202ENST00000438773 KIAA2012Q0VF49 1180 aa13.86□□□□□ -0.19
TRAPPC9-202ENST00000438773 BICDL1Q6ZP65 573 aa13.86□□□□□ -0.19
TRAPPC9-202ENST00000438773 NRXN1Q9ULB1 1477 aa13.86□□□□□ -0.19
TRAPPC9-202ENST00000438773 ECHDC1Q9NTX5 307 aa13.86□□□□□ -0.19
TRAPPC9-202ENST00000438773 CWC25Q9NXE8 425 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC9-202ENST00000438773 ARHGEF40Q8TER5 1519 aa13.86□□□□□ -0.19
TRAPPC9-202ENST00000438773 DEPDC5O75140 1603 aa13.86□□□□□ -0.19
TRAPPC9-202ENST00000438773 KIAA0232Q92628 1395 aa13.86□□□□□ -0.19
TRAPPC9-202ENST00000438773 CDK12Q9NYV4 1490 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC9-202ENST00000438773 SF3A1Q15459 793 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-202ENST00000438773 SYNE3Q6ZMZ3 975 aa13.85□□□□□ -0.19
TRAPPC9-202ENST00000438773 TRMT112Q9UI30 125 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-202ENST00000438773 HOXB7P09629 217 aa13.85□□□□□ -0.19
TRAPPC9-202ENST00000438773 CYP46A1Q9Y6A2 500 aa13.85□□□□□ -0.19
TRAPPC9-202ENST00000438773 EIF4A1P60842 406 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-202ENST00000438773 KCNQ3O43525 872 aa13.84□□□□□ -0.19
TRAPPC9-202ENST00000438773 IFIT5Q13325 482 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-202ENST00000438773 METTL24Q5JXM2 366 aa13.84□□□□□ -0.19
TRAPPC9-202ENST00000438773 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC9-202ENST00000438773 CHAF1AQ13111 956 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC9-202ENST00000438773 R3HCC1Q9Y3T6 440 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-202ENST00000438773 GRPEL1Q9HAV7 217 aa13.84□□□□□ -0.19
TRAPPC9-202ENST00000438773 PA2G4Q9UQ80 394 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-202ENST00000438773 ERBB4Q15303 1308 aa13.83□□□□□ -0.2
TRAPPC9-202ENST00000438773 CDK11BP21127 795 aaKnown RBP13.83□□□□□ -0.2
TRAPPC9-202ENST00000438773 HSP90AB3PQ58FF7 597 aa13.83□□□□□ -0.2
TRAPPC9-202ENST00000438773 ADGRB1O14514 1584 aa13.83□□□□□ -0.2
TRAPPC9-202ENST00000438773 PCDH11XQ9BZA7 1347 aa13.83□□□□□ -0.2
TRAPPC9-202ENST00000438773 PCDH11YQ9BZA8 1340 aa13.83□□□□□ -0.2
TRAPPC9-202ENST00000438773 ACSBG1Q96GR2 724 aa13.83□□□□□ -0.2
TRAPPC9-202ENST00000438773 JAKMIP1Q96N16 626 aaKnown RBP13.83□□□□□ -0.2
TRAPPC9-202ENST00000438773 DDB1Q16531 1140 aa13.83□□□□□ -0.2
TRAPPC9-202ENST00000438773 SLC52A2Q9HAB3 445 aa13.83□□□□□ -0.2
TRAPPC9-202ENST00000438773 ZC3H13Q5T200 1668 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms