RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 ERC1Q8IUD2 1116 aa13.9□□□□□ -0.18
PDLIM5-206ENST00000437932 CHMP4CQ96CF2 233 aa13.9□□□□□ -0.18
PDLIM5-206ENST00000437932 PUS7Q96PZ0 661 aaKnown RBP13.9□□□□□ -0.18
PDLIM5-206ENST00000437932 NDUFB9Q9Y6M9 179 aa13.9□□□□□ -0.18
PDLIM5-206ENST00000437932 KLHDC4Q8TBB5 520 aa13.9□□□□□ -0.18
PDLIM5-206ENST00000437932 ISY1Q9ULR0 285 aaKnown RBP13.9□□□□□ -0.18
PDLIM5-206ENST00000437932 HOXC9P31274 260 aa13.89□□□□□ -0.19
PDLIM5-206ENST00000437932 BLOC1S2Q6QNY1 142 aa13.89□□□□□ -0.19
PDLIM5-206ENST00000437932 SPATA32Q96LK8 384 aa13.89□□□□□ -0.19
PDLIM5-206ENST00000437932 IQGAP1P46940 1657 aa13.89□□□□□ -0.19
PDLIM5-206ENST00000437932 TATP17735 454 aaPredicted RBP13.89□□□□□ -0.19
PDLIM5-206ENST00000437932 ABCC3O15438 1527 aa13.89□□□□□ -0.19
PDLIM5-206ENST00000437932 KCNQ3O43525 872 aa13.89□□□□□ -0.19
PDLIM5-206ENST00000437932 RAB11FIP3O75154 756 aa13.89□□□□□ -0.19
PDLIM5-206ENST00000437932 CHRNA2Q15822 529 aa13.89□□□□□ -0.19
PDLIM5-206ENST00000437932 PRDM10Q9NQV6 1147 aa13.89□□□□□ -0.19
PDLIM5-206ENST00000437932 CHMLP26374 656 aa13.89□□□□□ -0.19
PDLIM5-206ENST00000437932 PALD1Q9ULE6 856 aa13.89□□□□□ -0.19
PDLIM5-206ENST00000437932 TULP4Q9NRJ4 1543 aa13.88□□□□□ -0.19
PDLIM5-206ENST00000437932 MROH2AA6NES4 1674 aa13.88□□□□□ -0.19
PDLIM5-206ENST00000437932 LAMC1P11047 1609 aa13.88□□□□□ -0.19
PDLIM5-206ENST00000437932 CHL1O00533 1208 aa13.88□□□□□ -0.19
PDLIM5-206ENST00000437932 GADD45BO75293 160 aaPredicted RBP13.88□□□□□ -0.19
PDLIM5-206ENST00000437932 CCT2P78371 535 aaKnown RBP13.88□□□□□ -0.19
PDLIM5-206ENST00000437932 PIK3R4Q99570 1358 aa13.88□□□□□ -0.19
PDLIM5-206ENST00000437932 TTC39AQ5SRH9 613 aa13.88□□□□□ -0.19
PDLIM5-206ENST00000437932 HECW2Q9P2P5 1572 aa13.88□□□□□ -0.19
PDLIM5-206ENST00000437932 STX6O43752 255 aa13.87□□□□□ -0.19
PDLIM5-206ENST00000437932 HCLS1P14317 486 aaPredicted RBP13.87□□□□□ -0.19
PDLIM5-206ENST00000437932 TPM2P07951 284 aa13.87□□□□□ -0.19
PDLIM5-206ENST00000437932 AK2P54819 239 aa13.87□□□□□ -0.19
PDLIM5-206ENST00000437932 TPD52L1Q16890 204 aaPredicted RBP13.87□□□□□ -0.19
PDLIM5-206ENST00000437932 SBNO2Q9Y2G9 1366 aa13.87□□□□□ -0.19
PDLIM5-206ENST00000437932 ANKRD24Q8TF21 1146 aa13.87□□□□□ -0.19
PDLIM5-206ENST00000437932 CABLES1Q8TDN4 633 aa13.87□□□□□ -0.19
PDLIM5-206ENST00000437932 LIMCH1Q9UPQ0 1083 aa13.87□□□□□ -0.19
PDLIM5-206ENST00000437932 NRDCO43847 1150 aa13.87□□□□□ -0.19
PDLIM5-206ENST00000437932 GLRX3O76003 335 aaKnown RBP13.87□□□□□ -0.19
PDLIM5-206ENST00000437932 ATP2B1P20020 1258 aa13.87□□□□□ -0.19
PDLIM5-206ENST00000437932 LTKP29376 864 aa13.87□□□□□ -0.19
PDLIM5-206ENST00000437932 TPM4P67936 248 aa13.87□□□□□ -0.19
PDLIM5-206ENST00000437932 ANKLE2Q86XL3 938 aa13.87□□□□□ -0.19
PDLIM5-206ENST00000437932 LRSAM1Q6UWE0 723 aa13.86□□□□□ -0.19
PDLIM5-206ENST00000437932 NBPF7P0C2Y1 421 aaPredicted RBP13.86□□□□□ -0.19
PDLIM5-206ENST00000437932 DNM1Q05193 864 aaKnown RBP13.86□□□□□ -0.19
PDLIM5-206ENST00000437932 MTMR7Q9Y216 660 aa13.86□□□□□ -0.19
PDLIM5-206ENST00000437932 ADCY5O95622 1261 aa13.86□□□□□ -0.19
PDLIM5-206ENST00000437932 RRP12Q5JTH9 1297 aaKnown RBP13.86□□□□□ -0.19
PDLIM5-206ENST00000437932 TOM1L2Q6ZVM7 507 aa13.86□□□□□ -0.19
PDLIM5-206ENST00000437932 KCNA6P17658 529 aa13.85□□□□□ -0.19
PDLIM5-206ENST00000437932 CCDC73Q6ZRK6 1079 aa13.85□□□□□ -0.19
PDLIM5-206ENST00000437932 CCAR2Q8N163 923 aaKnown RBP13.85□□□□□ -0.19
PDLIM5-206ENST00000437932 CCDC192P0DO97 292 aa13.85□□□□□ -0.19
PDLIM5-206ENST00000437932 HSP90AB3PQ58FF7 597 aa13.85□□□□□ -0.19
PDLIM5-206ENST00000437932 UNC5CLQ8IV45 518 aa13.85□□□□□ -0.19
PDLIM5-206ENST00000437932 DDX17Q92841 729 aaKnown RBP13.85□□□□□ -0.19
PDLIM5-206ENST00000437932 SMC2O95347 1197 aa13.85□□□□□ -0.19
PDLIM5-206ENST00000437932 KRT85P78386 507 aa13.85□□□□□ -0.19
PDLIM5-206ENST00000437932 CCDC183Q5T5S1 534 aa13.85□□□□□ -0.19
PDLIM5-206ENST00000437932 NMIQ13287 307 aaPredicted RBP13.85□□□□□ -0.19
PDLIM5-206ENST00000437932 CLCN1P35523 988 aa13.84□□□□□ -0.19
PDLIM5-206ENST00000437932 ME1P48163 572 aa13.84□□□□□ -0.19
PDLIM5-206ENST00000437932 C17orf53Q8N3J3 647 aaPredicted RBP13.84□□□□□ -0.19
PDLIM5-206ENST00000437932 NUP62CLQ9H1M0 184 aa13.84□□□□□ -0.19
PDLIM5-206ENST00000437932 FLT4P35916 1363 aa13.84□□□□□ -0.19
PDLIM5-206ENST00000437932 DDX46Q7L014 1031 aaKnown RBP13.84□□□□□ -0.19
PDLIM5-206ENST00000437932 PRR36Q9H6K5 1346 aa13.84□□□□□ -0.19
PDLIM5-206ENST00000437932 SDF4Q9BRK5 362 aa13.84□□□□□ -0.19
PDLIM5-206ENST00000437932 DBF4Q9UBU7 674 aaPredicted RBP13.84□□□□□ -0.19
PDLIM5-206ENST00000437932 RTL1A6NKG5 1358 aa13.84□□□□□ -0.19
PDLIM5-206ENST00000437932 MAP3K5Q99683 1374 aa13.84□□□□□ -0.19
PDLIM5-206ENST00000437932 LETM1O95202 739 aaPredicted RBP13.84□□□□□ -0.19
PDLIM5-206ENST00000437932 CHST3Q7LGC8 479 aa13.84□□□□□ -0.19
PDLIM5-206ENST00000437932 ZBTB3Q9H5J0 574 aa13.84□□□□□ -0.19
PDLIM5-206ENST00000437932 SNRKQ9NRH2 765 aa13.84□□□□□ -0.19
PDLIM5-206ENST00000437932 ADGRB3O60242 1522 aa13.84□□□□□ -0.19
PDLIM5-206ENST00000437932 CAMSAP1Q5T5Y3 1602 aa13.83□□□□□ -0.2
PDLIM5-206ENST00000437932 HIP1O00291 1037 aa13.83□□□□□ -0.2
PDLIM5-206ENST00000437932 PES1O00541 588 aaKnown RBP13.83□□□□□ -0.2
PDLIM5-206ENST00000437932 UBE3BQ7Z3V4 1068 aa13.83□□□□□ -0.2
PDLIM5-206ENST00000437932 ECHDC1Q9NTX5 307 aa13.83□□□□□ -0.2
PDLIM5-206ENST00000437932 KIF3AQ9Y496 699 aa13.83□□□□□ -0.2
PDLIM5-206ENST00000437932 BICC1Q9H694 974 aaKnown RBP13.83□□□□□ -0.2
PDLIM5-206ENST00000437932 LMBRD1Q9NUN5 540 aa13.83□□□□□ -0.2
PDLIM5-206ENST00000437932 ZSCAN22P10073 491 aaPredicted RBP13.83□□□□□ -0.2
PDLIM5-206ENST00000437932 CCDC129Q6ZRS4 1044 aa13.83□□□□□ -0.2
PDLIM5-206ENST00000437932 RALYLQ86SE5 291 aaKnown RBP13.83□□□□□ -0.2
PDLIM5-206ENST00000437932 FAM135BQ49AJ0 1406 aa13.83□□□□□ -0.2
PDLIM5-206ENST00000437932 SOS1Q07889 1333 aaPredicted RBP13.82□□□□□ -0.2
PDLIM5-206ENST00000437932 HAND2P61296 217 aa13.82□□□□□ -0.2
PDLIM5-206ENST00000437932 GPT2Q8TD30 523 aa13.82□□□□□ -0.2
PDLIM5-206ENST00000437932 CLASP1Q7Z460 1538 aa13.82□□□□□ -0.2
PDLIM5-206ENST00000437932 GOLIM4O00461 696 aa13.82□□□□□ -0.2
PDLIM5-206ENST00000437932 FAM173BQ6P4H8 233 aa13.82□□□□□ -0.2
PDLIM5-206ENST00000437932 RBM8AQ9Y5S9 174 aaKnown RBP13.82□□□□□ -0.2
PDLIM5-206ENST00000437932 PRAMEF22A3QJZ6 481 aa13.82□□□□□ -0.2
PDLIM5-206ENST00000437932 RASSF8Q8NHQ8 419 aa13.82□□□□□ -0.2
PDLIM5-206ENST00000437932 ISM2Q6H9L7 571 aa13.81□□□□□ -0.2
PDLIM5-206ENST00000437932 TRDNQ13061 729 aa13.81□□□□□ -0.2
PDLIM5-206ENST00000437932 SYNE3Q6ZMZ3 975 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms