RNA–Protein interactions for RNA: ENST00000436679.2

C2CD3-206, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 1,134 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-206ENST00000436679 AMIGO3Q86WK7 504 aa20.62■□□□□ 0.89
C2CD3-206ENST00000436679 AK7Q96M32 723 aa20.62■□□□□ 0.89
C2CD3-206ENST00000436679 CNTNAP4Q9C0A0 1308 aa20.61■□□□□ 0.89
C2CD3-206ENST00000436679 CHL1O00533 1208 aa20.61■□□□□ 0.89
C2CD3-206ENST00000436679 RC3H1Q5TC82 1133 aaKnown RBP20.61■□□□□ 0.89
C2CD3-206ENST00000436679 MIS18AQ9NYP9 233 aa20.61■□□□□ 0.89
C2CD3-206ENST00000436679 KDM3BQ7LBC6 1761 aa20.61■□□□□ 0.89
C2CD3-206ENST00000436679 COL5A3P25940 1745 aaPredicted RBP20.61■□□□□ 0.89
C2CD3-206ENST00000436679 COL24A1Q17RW2 1714 aa20.61■□□□□ 0.89
C2CD3-206ENST00000436679 SENP3-EIF4A1A0A087X0R7 540 aa20.6■□□□□ 0.89
C2CD3-206ENST00000436679 YBX3P16989 372 aaKnown RBP eCLIP20.6■□□□□ 0.89
C2CD3-206ENST00000436679 WWC1Q8IX03 1113 aa20.6■□□□□ 0.89
C2CD3-206ENST00000436679 DNAJC10Q8IXB1 793 aa20.6■□□□□ 0.89
C2CD3-206ENST00000436679 FLAD1Q8NFF5 587 aa20.6■□□□□ 0.89
C2CD3-206ENST00000436679 TSPYL4Q9UJ04 414 aa20.6■□□□□ 0.89
C2CD3-206ENST00000436679 CHD4Q14839 1912 aa20.59■□□□□ 0.89
C2CD3-206ENST00000436679 CFAP44Q96MT7 982 aa20.59■□□□□ 0.89
C2CD3-206ENST00000436679 TEX13AQ9BXU3 409 aaPredicted RBP20.59■□□□□ 0.89
C2CD3-206ENST00000436679 GRIN3BO60391 1043 aa20.58■□□□□ 0.89
C2CD3-206ENST00000436679 ZNF853P0CG23 659 aa20.58■□□□□ 0.89
C2CD3-206ENST00000436679 CYP19A1P11511 503 aaPredicted RBP20.58■□□□□ 0.89
C2CD3-206ENST00000436679 EIF4A1P60842 406 aaKnown RBP20.58■□□□□ 0.89
C2CD3-206ENST00000436679 IFT57Q9NWB7 429 aa20.58■□□□□ 0.89
C2CD3-206ENST00000436679 SNRPA1P09661 255 aaKnown RBP20.57■□□□□ 0.88
C2CD3-206ENST00000436679 CRKLP46109 303 aaKnown RBP20.57■□□□□ 0.88
C2CD3-206ENST00000436679 IL16Q14005 1332 aa20.56■□□□□ 0.88
C2CD3-206ENST00000436679 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.56■□□□□ 0.88
C2CD3-206ENST00000436679 GIGYF1O75420 1035 aaPredicted RBP20.55■□□□□ 0.88
C2CD3-206ENST00000436679 STARD3NLO95772 234 aa20.55■□□□□ 0.88
C2CD3-206ENST00000436679 SSFA2P28290 1259 aa20.55■□□□□ 0.88
C2CD3-206ENST00000436679 GNAI1P63096 354 aa20.55■□□□□ 0.88
C2CD3-206ENST00000436679 INTS5Q6P9B9 1019 aaKnown RBP20.55■□□□□ 0.88
C2CD3-206ENST00000436679 WDR63Q8IWG1 891 aa20.55■□□□□ 0.88
C2CD3-206ENST00000436679 GNPATO15228 680 aa20.54■□□□□ 0.88
C2CD3-206ENST00000436679 RPS6KA4O75676 772 aa20.54■□□□□ 0.88
C2CD3-206ENST00000436679 CCDC87Q9NVE4 849 aa20.54■□□□□ 0.88
C2CD3-206ENST00000436679 WWC3Q9ULE0 1092 aa20.54■□□□□ 0.88
C2CD3-206ENST00000436679 CD2APQ9Y5K6 639 aa20.54■□□□□ 0.88
C2CD3-206ENST00000436679 MBIPQ9NS73 344 aa20.53■□□□□ 0.88
C2CD3-206ENST00000436679 LAS1LQ9Y4W2 734 aaKnown RBP20.53■□□□□ 0.88
C2CD3-206ENST00000436679 ZNF521Q96K83 1311 aa20.53■□□□□ 0.88
C2CD3-206ENST00000436679 PRAMEF22A3QJZ6 481 aa20.52■□□□□ 0.88
C2CD3-206ENST00000436679 ADRA2BP18089 450 aa20.52■□□□□ 0.88
C2CD3-206ENST00000436679 RTCBQ9Y3I0 505 aaKnown RBP20.52■□□□□ 0.88
C2CD3-206ENST00000436679 SALL2Q9Y467 1007 aaPredicted RBP20.52■□□□□ 0.88
C2CD3-206ENST00000436679 UBR3Q6ZT12 1888 aa20.52■□□□□ 0.87
C2CD3-206ENST00000436679 USP16Q9Y5T5 823 aa20.51■□□□□ 0.87
C2CD3-206ENST00000436679 CEP350Q5VT06 3117 aa20.51■□□□□ 0.87
C2CD3-206ENST00000436679 ZBTB1Q9Y2K1 713 aa20.5■□□□□ 0.87
C2CD3-206ENST00000436679 SOS1Q07889 1333 aaPredicted RBP20.5■□□□□ 0.87
C2CD3-206ENST00000436679 MYH14Q7Z406 1995 aaKnown RBP20.48■□□□□ 0.87
C2CD3-206ENST00000436679 HOXB7P09629 217 aa20.48■□□□□ 0.87
C2CD3-206ENST00000436679 LAMB4A4D0S4 1761 aa20.48■□□□□ 0.87
C2CD3-206ENST00000436679 TRAPPC3LQ5T215 181 aa20.47■□□□□ 0.87
C2CD3-206ENST00000436679 A1BGP04217 495 aa20.46■□□□□ 0.87
C2CD3-206ENST00000436679 IL6STP40189 918 aaPredicted RBP20.46■□□□□ 0.87
C2CD3-206ENST00000436679 ARHGEF1Q92888 912 aaKnown RBP20.46■□□□□ 0.87
C2CD3-206ENST00000436679 CANXP27824 592 aaKnown RBP20.45■□□□□ 0.86
C2CD3-206ENST00000436679 EIF5P55010 431 aaKnown RBP20.45■□□□□ 0.86
C2CD3-206ENST00000436679 KRT24Q2M2I5 525 aa20.45■□□□□ 0.86
C2CD3-206ENST00000436679 ERBB4Q15303 1308 aa20.45■□□□□ 0.86
C2CD3-206ENST00000436679 COL15A1P39059 1388 aa20.45■□□□□ 0.86
C2CD3-206ENST00000436679 TSR2Q969E8 191 aaKnown RBP20.44■□□□□ 0.86
C2CD3-206ENST00000436679 FANCIQ9NVI1 1328 aa20.44■□□□□ 0.86
C2CD3-206ENST00000436679 NBPF26B4DH59 902 aa20.43■□□□□ 0.86
C2CD3-206ENST00000436679 MMP10P09238 476 aa20.43■□□□□ 0.86
C2CD3-206ENST00000436679 RFC4P35249 363 aa20.43■□□□□ 0.86
C2CD3-206ENST00000436679 DUSP27Q5VZP5 1158 aa20.43■□□□□ 0.86
C2CD3-206ENST00000436679 NBPF10Q6P3W6 841 aaKnown RBP20.43■□□□□ 0.86
C2CD3-206ENST00000436679 NBPF15Q8N660 670 aa20.43■□□□□ 0.86
C2CD3-206ENST00000436679 MYH16Q9H6N6 1097 aa20.43■□□□□ 0.86
C2CD3-206ENST00000436679 SPINK5Q9NQ38 1064 aaPredicted RBP20.43■□□□□ 0.86
C2CD3-206ENST00000436679 A0A087WZG4 1122 aa20.42■□□□□ 0.86
C2CD3-206ENST00000436679 USP42Q9H9J4 1324 aaKnown RBP20.42■□□□□ 0.86
C2CD3-206ENST00000436679 GOLGA2Q08379 1002 aa20.41■□□□□ 0.86
C2CD3-206ENST00000436679 C8orf58Q8NAV2 365 aa20.41■□□□□ 0.86
C2CD3-206ENST00000436679 ATP10DQ9P241 1426 aa20.41■□□□□ 0.86
C2CD3-206ENST00000436679 C4AP0C0L4 1744 aa20.41■□□□□ 0.86
C2CD3-206ENST00000436679 ZNF526Q8TF50 670 aaPredicted RBP20.4■□□□□ 0.86
C2CD3-206ENST00000436679 ADCY9O60503 1353 aa20.39■□□□□ 0.85
C2CD3-206ENST00000436679 E9PSI1 815 aa20.39■□□□□ 0.85
C2CD3-206ENST00000436679 EIF2S2P20042 333 aaKnown RBP20.39■□□□□ 0.85
C2CD3-206ENST00000436679 PIP4K2AP48426 406 aaPredicted RBP20.39■□□□□ 0.85
C2CD3-206ENST00000436679 HDGFL1Q5TGJ6 251 aa20.39■□□□□ 0.85
C2CD3-206ENST00000436679 NARFQ9UHQ1 456 aa20.39■□□□□ 0.85
C2CD3-206ENST00000436679 GYS1P13807 737 aa20.38■□□□□ 0.85
C2CD3-206ENST00000436679 PDIA6Q15084 440 aa20.38■□□□□ 0.85
C2CD3-206ENST00000436679 SRP68Q9UHB9 627 aaKnown RBP20.38■□□□□ 0.85
C2CD3-206ENST00000436679 ZPR1O75312 459 aa20.37■□□□□ 0.85
C2CD3-206ENST00000436679 HNRNPUQ00839 825 aaKnown RBP eCLIP20.37■□□□□ 0.85
C2CD3-206ENST00000436679 LRP10Q7Z4F1 713 aa20.37■□□□□ 0.85
C2CD3-206ENST00000436679 NPM2Q86SE8 214 aaKnown RBP20.37■□□□□ 0.85
C2CD3-206ENST00000436679 NLGN1Q8N2Q7 840 aa20.37■□□□□ 0.85
C2CD3-206ENST00000436679 TSPYL6Q8N831 410 aa20.37■□□□□ 0.85
C2CD3-206ENST00000436679 CHMP4AQ9BY43 222 aa20.37■□□□□ 0.85
C2CD3-206ENST00000436679 GPBP1L1Q9HC44 474 aaPredicted RBP20.37■□□□□ 0.85
C2CD3-206ENST00000436679 RGL2O15211 777 aa20.36■□□□□ 0.85
C2CD3-206ENST00000436679 SLFN5Q08AF3 891 aa20.36■□□□□ 0.85
C2CD3-206ENST00000436679 USPL1Q5W0Q7 1092 aa20.36■□□□□ 0.85
C2CD3-206ENST00000436679 DDX21Q9NR30 783 aaKnown RBP eCLIP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms