RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 TSPYL1Q9H0U9 437 aa8.82□□□□□ -1
CPSF6-202ENST00000435070 EPC1Q9H2F5 836 aa8.82□□□□□ -1
CPSF6-202ENST00000435070 GNAI1P63096 354 aa8.82□□□□□ -1
CPSF6-202ENST00000435070 BICD2Q8TD16 824 aa8.82□□□□□ -1
CPSF6-202ENST00000435070 ATP10BO94823 1461 aa8.82□□□□□ -1
CPSF6-202ENST00000435070 TMEM87AQ8NBN3 555 aa8.82□□□□□ -1
CPSF6-202ENST00000435070 CCDC34Q96HJ3 373 aa8.82□□□□□ -1
CPSF6-202ENST00000435070 PBRM1Q86U86 1689 aa8.82□□□□□ -1
CPSF6-202ENST00000435070 KIF3BO15066 747 aa8.82□□□□□ -1
CPSF6-202ENST00000435070 PNMA6AP0CW24 399 aaPredicted RBP8.82□□□□□ -1
CPSF6-202ENST00000435070 CCDC69A6NI79 296 aa8.82□□□□□ -1
CPSF6-202ENST00000435070 PLA2G4AP47712 749 aa8.82□□□□□ -1
CPSF6-202ENST00000435070 PRM3Q9NNZ6 103 aa8.82□□□□□ -1
CPSF6-202ENST00000435070 AFAP1Q8N556 730 aa8.81□□□□□ -1
CPSF6-202ENST00000435070 SMARCE1Q969G3 411 aa8.81□□□□□ -1
CPSF6-202ENST00000435070 RAD50Q92878 1312 aa8.81□□□□□ -1
CPSF6-202ENST00000435070 ANKRD65E5RJM6 399 aa8.81□□□□□ -1
CPSF6-202ENST00000435070 CEBPZQ03701 1054 aaKnown RBP8.81□□□□□ -1
CPSF6-202ENST00000435070 LRRC8AQ8IWT6 810 aa8.81□□□□□ -1
CPSF6-202ENST00000435070 MYO1CO00159 1063 aa8.81□□□□□ -1
CPSF6-202ENST00000435070 SKIDA1Q1XH10 827 aa8.81□□□□□ -1
CPSF6-202ENST00000435070 RASEFQ8IZ41 740 aa8.81□□□□□ -1
CPSF6-202ENST00000435070 KIF1BPQ96EK5 621 aa8.81□□□□□ -1
CPSF6-202ENST00000435070 MADDQ8WXG6 1647 aa8.81□□□□□ -1
CPSF6-202ENST00000435070 IQGAP1P46940 1657 aa8.81□□□□□ -1
CPSF6-202ENST00000435070 RUFY3Q7L099 469 aa8.81□□□□□ -1
CPSF6-202ENST00000435070 HOMER1Q86YM7 354 aa8.81□□□□□ -1
CPSF6-202ENST00000435070 SPG7Q9UQ90 795 aa8.81□□□□□ -1
CPSF6-202ENST00000435070 FHOD1Q9Y613 1164 aa8.81□□□□□ -1
CPSF6-202ENST00000435070 MTMR6Q9Y217 621 aa8.81□□□□□ -1
CPSF6-202ENST00000435070 CEP152O94986 1710 aa8.81□□□□□ -1
CPSF6-202ENST00000435070 HMMRO75330 724 aa8.8□□□□□ -1
CPSF6-202ENST00000435070 ZSCAN26Q16670 478 aa8.8□□□□□ -1
CPSF6-202ENST00000435070 TMCO3Q6UWJ1 677 aa8.8□□□□□ -1
CPSF6-202ENST00000435070 FAM177A1Q8N128 213 aaPredicted RBP8.8□□□□□ -1
CPSF6-202ENST00000435070 ZNF428Q96B54 188 aa8.8□□□□□ -1
CPSF6-202ENST00000435070 SYCP2Q9BX26 1530 aa8.8□□□□□ -1
CPSF6-202ENST00000435070 MED14O60244 1454 aa8.8□□□□□ -1
CPSF6-202ENST00000435070 IFT140Q96RY7 1462 aa8.8□□□□□ -1
CPSF6-202ENST00000435070 BECN2A8MW95 431 aa8.8□□□□□ -1
CPSF6-202ENST00000435070 DHX16O60231 1041 aaKnown RBP8.8□□□□□ -1
CPSF6-202ENST00000435070 NUTM1Q86Y26 1132 aa8.8□□□□□ -1
CPSF6-202ENST00000435070 ERCC4Q92889 916 aaPredicted RBP8.8□□□□□ -1
CPSF6-202ENST00000435070 LIMCH1Q9UPQ0 1083 aa8.8□□□□□ -1
CPSF6-202ENST00000435070 RNF17Q9BXT8 1623 aaKnown RBP8.8□□□□□ -1
CPSF6-202ENST00000435070 CASTP20810 708 aaKnown RBP8.8□□□□□ -1
CPSF6-202ENST00000435070 LMAN1P49257 510 aa8.8□□□□□ -1
CPSF6-202ENST00000435070 TEX2Q8IWB9 1127 aa8.8□□□□□ -1
CPSF6-202ENST00000435070 ERCC6Q03468 1493 aa8.8□□□□□ -1
CPSF6-202ENST00000435070 NFE2L2Q16236 605 aa8.8□□□□□ -1
CPSF6-202ENST00000435070 LARP1BQ659C4 914 aaKnown RBP8.8□□□□□ -1
CPSF6-202ENST00000435070 TCEANC2Q96MN5 208 aa8.8□□□□□ -1
CPSF6-202ENST00000435070 FYB1O15117 783 aa8.8□□□□□ -1
CPSF6-202ENST00000435070 GNL2Q13823 731 aaKnown RBP8.8□□□□□ -1
CPSF6-202ENST00000435070 NFATC2IPQ8NCF5 419 aa8.8□□□□□ -1
CPSF6-202ENST00000435070 POLKQ9UBT6 870 aa8.8□□□□□ -1
CPSF6-202ENST00000435070 KRT85P78386 507 aa8.8□□□□□ -1
CPSF6-202ENST00000435070 UBXN4Q92575 508 aa8.8□□□□□ -1
CPSF6-202ENST00000435070 DRC1Q96MC2 740 aa8.8□□□□□ -1
CPSF6-202ENST00000435070 RGS12O14924 1447 aa8.79□□□□□ -1
CPSF6-202ENST00000435070 RTL1A6NKG5 1358 aa8.79□□□□□ -1
CPSF6-202ENST00000435070 FOSBP53539 338 aa8.79□□□□□ -1
CPSF6-202ENST00000435070 ANAPC15P60006 121 aa8.79□□□□□ -1
CPSF6-202ENST00000435070 SNW1Q13573 536 aaKnown RBP8.79□□□□□ -1
CPSF6-202ENST00000435070 PLA2G4DQ86XP0 818 aa8.79□□□□□ -1
CPSF6-202ENST00000435070 CCDC171Q6TFL3 1326 aa8.79□□□□□ -1
CPSF6-202ENST00000435070 FCHSD2O94868 740 aa8.79□□□□□ -1
CPSF6-202ENST00000435070 MSH6P52701 1360 aa8.79□□□□□ -1
CPSF6-202ENST00000435070 MIS18AQ9NYP9 233 aa8.79□□□□□ -1
CPSF6-202ENST00000435070 ERBB3P21860 1342 aa8.79□□□□□ -1
CPSF6-202ENST00000435070 EVC2Q86UK5 1308 aa8.79□□□□□ -1
CPSF6-202ENST00000435070 NR1I2O75469 434 aa8.79□□□□□ -1
CPSF6-202ENST00000435070 OAS2P29728 719 aaKnown RBP8.79□□□□□ -1
CPSF6-202ENST00000435070 TPM4P67936 248 aa8.79□□□□□ -1
CPSF6-202ENST00000435070 CWC27Q6UX04 472 aaKnown RBP8.79□□□□□ -1
CPSF6-202ENST00000435070 NECTIN2Q92692 538 aa8.79□□□□□ -1
CPSF6-202ENST00000435070 CARMIL2Q6F5E8 1435 aa8.79□□□□□ -1
CPSF6-202ENST00000435070 SART3Q15020 963 aaKnown RBP8.78□□□□□ -1
CPSF6-202ENST00000435070 CCAR2Q8N163 923 aaKnown RBP8.78□□□□□ -1
CPSF6-202ENST00000435070 SPATA32Q96LK8 384 aa8.78□□□□□ -1
CPSF6-202ENST00000435070 SNX14Q9Y5W7 946 aa8.78□□□□□ -1
CPSF6-202ENST00000435070 MINK1Q8N4C8 1332 aaPredicted RBP8.78□□□□□ -1
CPSF6-202ENST00000435070 SLC4A2P04920 1241 aa8.78□□□□□ -1
CPSF6-202ENST00000435070 CDC37L1Q7L3B6 337 aa8.78□□□□□ -1
CPSF6-202ENST00000435070 MNS1Q8NEH6 495 aa8.78□□□□□ -1
CPSF6-202ENST00000435070 FMNL2Q96PY5 1086 aa8.78□□□□□ -1
CPSF6-202ENST00000435070 PRR29P0C7W0 189 aa8.78□□□□□ -1
CPSF6-202ENST00000435070 BRPF1P55201 1214 aaPredicted RBP8.78□□□□□ -1
CPSF6-202ENST00000435070 GPS2Q13227 327 aa8.78□□□□□ -1
CPSF6-202ENST00000435070 EP400NLQ6ZTU2 488 aa8.78□□□□□ -1
CPSF6-202ENST00000435070 LRRCC1Q9C099 1032 aa8.78□□□□□ -1
CPSF6-202ENST00000435070 ARHGAP5Q13017 1502 aa8.78□□□□□ -1
CPSF6-202ENST00000435070 PTCH1Q13635 1447 aa8.78□□□□□ -1
CPSF6-202ENST00000435070 E2F4Q16254 413 aa8.78□□□□□ -1
CPSF6-202ENST00000435070 TXLNBQ8N3L3 684 aa8.78□□□□□ -1
CPSF6-202ENST00000435070 JAKMIP1Q96N16 626 aaKnown RBP8.78□□□□□ -1
CPSF6-202ENST00000435070 DNAI1Q9UI46 699 aa8.78□□□□□ -1
CPSF6-202ENST00000435070 ADAMTS12P58397 1594 aa8.78□□□□□ -1
CPSF6-202ENST00000435070 TTC37Q6PGP7 1564 aa8.78□□□□□ -1
CPSF6-202ENST00000435070 URI1O94763 535 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms