RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 FOSBP53539 338 aa7.11□□□□□ -1.27
RFC3-202ENST00000434425 XPCQ01831 940 aaPredicted RBP7.11□□□□□ -1.27
RFC3-202ENST00000434425 SF3A1Q15459 793 aaKnown RBP7.11□□□□□ -1.27
RFC3-202ENST00000434425 ESCO1Q5FWF5 840 aa7.11□□□□□ -1.27
RFC3-202ENST00000434425 CEP120Q8N960 986 aa7.11□□□□□ -1.27
RFC3-202ENST00000434425 POM121Q96HA1 1249 aa7.11□□□□□ -1.27
RFC3-202ENST00000434425 GJD4Q96KN9 370 aaPredicted RBP7.11□□□□□ -1.27
RFC3-202ENST00000434425 TSPAN18Q96SJ8 248 aa7.11□□□□□ -1.27
RFC3-202ENST00000434425 PCDHGA10Q9Y5H3 936 aa7.11□□□□□ -1.27
RFC3-202ENST00000434425 NEXMIFQ5QGS0 1516 aa7.1□□□□□ -1.27
RFC3-202ENST00000434425 PTCH1Q13635 1447 aa7.1□□□□□ -1.27
RFC3-202ENST00000434425 PARNO95453 639 aaKnown RBP7.1□□□□□ -1.27
RFC3-202ENST00000434425 EN1Q05925 392 aaPredicted RBP7.1□□□□□ -1.27
RFC3-202ENST00000434425 PSME1Q06323 249 aa7.1□□□□□ -1.27
RFC3-202ENST00000434425 WDR78Q5VTH9 848 aa7.1□□□□□ -1.27
RFC3-202ENST00000434425 NUB1Q9Y5A7 615 aa7.1□□□□□ -1.27
RFC3-202ENST00000434425 KIF1BO60333 1816 aa7.1□□□□□ -1.27
RFC3-202ENST00000434425 CLTCL1P53675 1640 aa7.09□□□□□ -1.27
RFC3-202ENST00000434425 ANP32CO43423 234 aa7.09□□□□□ -1.27
RFC3-202ENST00000434425 MS4A1P11836 297 aa7.09□□□□□ -1.27
RFC3-202ENST00000434425 SSFA2P28290 1259 aa7.09□□□□□ -1.27
RFC3-202ENST00000434425 SKIV2LQ15477 1246 aaKnown RBP7.09□□□□□ -1.27
RFC3-202ENST00000434425 C4orf46Q504U0 113 aa7.09□□□□□ -1.27
RFC3-202ENST00000434425 DEFB132Q7Z7B7 95 aa7.09□□□□□ -1.27
RFC3-202ENST00000434425 LARGE2Q8N3Y3 721 aa7.09□□□□□ -1.27
RFC3-202ENST00000434425 PMM1Q92871 262 aa7.09□□□□□ -1.27
RFC3-202ENST00000434425 PHOX2BQ99453 314 aa7.09□□□□□ -1.27
RFC3-202ENST00000434425 PNMA2Q9UL42 364 aa7.09□□□□□ -1.27
RFC3-202ENST00000434425 PCDHGA4Q9Y5G9 962 aa7.09□□□□□ -1.27
RFC3-202ENST00000434425 COL22A1Q8NFW1 1626 aaPredicted RBP7.08□□□□□ -1.28
RFC3-202ENST00000434425 NRDCO43847 1150 aa7.08□□□□□ -1.28
RFC3-202ENST00000434425 SH3BP5O60239 455 aa7.08□□□□□ -1.28
RFC3-202ENST00000434425 NEUROD1Q13562 356 aa7.08□□□□□ -1.28
RFC3-202ENST00000434425 CNGB1Q14028 1251 aaPredicted RBP7.08□□□□□ -1.28
RFC3-202ENST00000434425 SETDB1Q15047 1291 aa7.08□□□□□ -1.28
RFC3-202ENST00000434425 WAPLQ7Z5K2 1190 aa7.08□□□□□ -1.28
RFC3-202ENST00000434425 UNC5CLQ8IV45 518 aa7.08□□□□□ -1.28
RFC3-202ENST00000434425 MARF1Q9Y4F3 1742 aaKnown RBP7.08□□□□□ -1.28
RFC3-202ENST00000434425 BRWD3Q6RI45 1802 aa7.08□□□□□ -1.28
RFC3-202ENST00000434425 MYOM2P54296 1465 aa7.08□□□□□ -1.28
RFC3-202ENST00000434425 U2SURPO15042 1029 aaKnown RBP7.07□□□□□ -1.28
RFC3-202ENST00000434425 MAP3K7O43318 606 aa7.07□□□□□ -1.28
RFC3-202ENST00000434425 PAX3P23760 479 aa7.07□□□□□ -1.28
RFC3-202ENST00000434425 TTLL12Q14166 644 aaPredicted RBP7.07□□□□□ -1.28
RFC3-202ENST00000434425 FAM161AQ3B820 660 aa7.07□□□□□ -1.28
RFC3-202ENST00000434425 CDCA8Q53HL2 280 aa7.07□□□□□ -1.28
RFC3-202ENST00000434425 DPH6Q7L8W6 267 aa7.07□□□□□ -1.28
RFC3-202ENST00000434425 CXorf38Q8TB03 319 aa7.07□□□□□ -1.28
RFC3-202ENST00000434425 CCDC85AQ96PX6 553 aaPredicted RBP7.07□□□□□ -1.28
RFC3-202ENST00000434425 FAN1Q9Y2M0 1017 aa7.07□□□□□ -1.28
RFC3-202ENST00000434425 NPHP3Q7Z494 1330 aa7.07□□□□□ -1.28
RFC3-202ENST00000434425 SBNO2Q9Y2G9 1366 aa7.07□□□□□ -1.28
RFC3-202ENST00000434425 PXDNQ92626 1479 aa7.07□□□□□ -1.28
RFC3-202ENST00000434425 ZNF16P17020 682 aaPredicted RBP7.06□□□□□ -1.28
RFC3-202ENST00000434425 PPP4CP60510 307 aa7.06□□□□□ -1.28
RFC3-202ENST00000434425 GIGYF2Q6Y7W6 1299 aaKnown RBP7.06□□□□□ -1.28
RFC3-202ENST00000434425 NOP9Q86U38 636 aaKnown RBP7.06□□□□□ -1.28
RFC3-202ENST00000434425 HELBQ8NG08 1087 aaPredicted RBP7.06□□□□□ -1.28
RFC3-202ENST00000434425 PNISRQ8TF01 805 aaKnown RBP7.06□□□□□ -1.28
RFC3-202ENST00000434425 SENP7Q9BQF6 1050 aa7.06□□□□□ -1.28
RFC3-202ENST00000434425 KRTAP3-3Q9BYR6 98 aa7.06□□□□□ -1.28
RFC3-202ENST00000434425 KRTAP3-2Q9BYR7 98 aa7.06□□□□□ -1.28
RFC3-202ENST00000434425 STK26Q9P289 416 aa7.06□□□□□ -1.28
RFC3-202ENST00000434425 HFM1A2PYH4 1435 aa7.05□□□□□ -1.28
RFC3-202ENST00000434425 EPB41L2O43491 1005 aaKnown RBP7.05□□□□□ -1.28
RFC3-202ENST00000434425 RHBDL3P58872 404 aa7.05□□□□□ -1.28
RFC3-202ENST00000434425 NAALADL2Q58DX5 795 aa7.05□□□□□ -1.28
RFC3-202ENST00000434425 RPGRIP1LQ68CZ1 1315 aa7.05□□□□□ -1.28
RFC3-202ENST00000434425 RALGAPBQ86X10 1494 aa7.05□□□□□ -1.28
RFC3-202ENST00000434425 SLAIN1Q8ND83 568 aa7.05□□□□□ -1.28
RFC3-202ENST00000434425 NLRP7Q8WX94 980 aa7.05□□□□□ -1.28
RFC3-202ENST00000434425 KHSRPQ92945 711 aaKnown RBP eCLIP7.05□□□□□ -1.284e-7■■■■□ 23.4
RFC3-202ENST00000434425 VTI1AQ96AJ9 217 aa7.05□□□□□ -1.28
RFC3-202ENST00000434425 TRIM44Q96DX7 344 aaPredicted RBP7.05□□□□□ -1.28
RFC3-202ENST00000434425 EPAS1Q99814 870 aa7.05□□□□□ -1.28
RFC3-202ENST00000434425 SPOCK3Q9BQ16 436 aa7.05□□□□□ -1.28
RFC3-202ENST00000434425 COMMD10Q9Y6G5 202 aa7.05□□□□□ -1.28
RFC3-202ENST00000434425 GLI3P10071 1580 aa7.05□□□□□ -1.28
RFC3-202ENST00000434425 BLMP54132 1417 aaPredicted RBP7.05□□□□□ -1.28
RFC3-202ENST00000434425 SPATA31A3Q5VYP0 1347 aa7.05□□□□□ -1.28
RFC3-202ENST00000434425 ADGRF5Q8IZF2 1346 aa7.05□□□□□ -1.28
RFC3-202ENST00000434425 ZRANB2O95218 330 aaKnown RBP eCLIP7.04□□□□□ -1.282e-7■■■□□ 18.7
RFC3-202ENST00000434425 CSPP1Q1MSJ5 1256 aa7.04□□□□□ -1.28
RFC3-202ENST00000434425 TMEM132EQ6IEE7 984 aa7.04□□□□□ -1.28
RFC3-202ENST00000434425 KRT28Q7Z3Y7 464 aa7.04□□□□□ -1.28
RFC3-202ENST00000434425 SEPT12Q8IYM1 358 aa7.04□□□□□ -1.28
RFC3-202ENST00000434425 CABLES1Q8TDN4 633 aa7.04□□□□□ -1.28
RFC3-202ENST00000434425 RNF166Q96A37 237 aaPredicted RBP7.04□□□□□ -1.28
RFC3-202ENST00000434425 TMUB1Q9BVT8 246 aa7.04□□□□□ -1.28
RFC3-202ENST00000434425 GNL3LQ9NVN8 582 aaKnown RBP7.04□□□□□ -1.28
RFC3-202ENST00000434425 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.04□□□□□ -1.28
RFC3-202ENST00000434425 NOP58Q9Y2X3 529 aaKnown RBP7.04□□□□□ -1.28
RFC3-202ENST00000434425 SLIT2O94813 1529 aa7.04□□□□□ -1.28
RFC3-202ENST00000434425 LRPPRCP42704 1394 aaKnown RBP7.04□□□□□ -1.28
RFC3-202ENST00000434425 PSDA5PKW4 1024 aaPredicted RBP7.04□□□□□ -1.28
RFC3-202ENST00000434425 KIF4AO95239 1232 aa7.04□□□□□ -1.28
RFC3-202ENST00000434425 BDNFP23560 247 aa7.04□□□□□ -1.28
RFC3-202ENST00000434425 SF3B2Q13435 895 aaKnown RBP7.04□□□□□ -1.28
RFC3-202ENST00000434425 RGL3Q3MIN7 710 aa7.04□□□□□ -1.28
RFC3-202ENST00000434425 ZNF280DQ6N043 979 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms