RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 FEZ1Q99689 392 aa8.83□□□□□ -1
SYNPO2-203ENST00000434046 EXOC6BQ9Y2D4 811 aa8.83□□□□□ -1
SYNPO2-203ENST00000434046 TTC21AQ8NDW8 1320 aa8.83□□□□□ -1
SYNPO2-203ENST00000434046 SETBP1Q9Y6X0 1596 aa8.83□□□□□ -1
SYNPO2-203ENST00000434046 BRD1O95696 1058 aa8.83□□□□□ -1
SYNPO2-203ENST00000434046 TIGD1Q96MW7 591 aa8.83□□□□□ -1
SYNPO2-203ENST00000434046 PHF23Q9BUL5 403 aaPredicted RBP8.83□□□□□ -1
SYNPO2-203ENST00000434046 IQGAP1P46940 1657 aa8.83□□□□□ -1
SYNPO2-203ENST00000434046 IL13P35225 146 aa8.82□□□□□ -1
SYNPO2-203ENST00000434046 CKAP2LQ8IYA6 745 aa8.82□□□□□ -1
SYNPO2-203ENST00000434046 USHBP1Q8N6Y0 703 aa8.82□□□□□ -1
SYNPO2-203ENST00000434046 A2ML1A8K2U0 1454 aa8.82□□□□□ -1
SYNPO2-203ENST00000434046 MAP4K4O95819 1239 aaPredicted RBP8.82□□□□□ -1
SYNPO2-203ENST00000434046 NAA30Q147X3 362 aaPredicted RBP8.82□□□□□ -1
SYNPO2-203ENST00000434046 PLEKHO1Q53GL0 409 aaPredicted RBP8.82□□□□□ -1
SYNPO2-203ENST00000434046 HDGFL1Q5TGJ6 251 aa8.82□□□□□ -1
SYNPO2-203ENST00000434046 ZNF530Q6P9A1 599 aaPredicted RBP8.82□□□□□ -1
SYNPO2-203ENST00000434046 MRPL50Q8N5N7 158 aaKnown RBP8.82□□□□□ -1
SYNPO2-203ENST00000434046 FBXW7Q969H0 707 aa8.82□□□□□ -1
SYNPO2-203ENST00000434046 SIRT1Q96EB6 747 aa8.82□□□□□ -1
SYNPO2-203ENST00000434046 GNAT3A8MTJ3 354 aa8.82□□□□□ -1
SYNPO2-203ENST00000434046 GOLGA6L19H0YKK7 550 aa8.82□□□□□ -1
SYNPO2-203ENST00000434046 HDAC5Q9UQL6 1122 aa8.82□□□□□ -1
SYNPO2-203ENST00000434046 FERMT3Q86UX7 667 aa8.81□□□□□ -1
SYNPO2-203ENST00000434046 KRT222Q8N1A0 295 aa8.81□□□□□ -1
SYNPO2-203ENST00000434046 C8orf58Q8NAV2 365 aa8.81□□□□□ -1
SYNPO2-203ENST00000434046 KCNH5Q8NCM2 988 aa8.81□□□□□ -1
SYNPO2-203ENST00000434046 DCTPP1Q9H773 170 aa8.81□□□□□ -1
SYNPO2-203ENST00000434046 ZNF330Q9Y3S2 320 aaPredicted RBP8.81□□□□□ -1
SYNPO2-203ENST00000434046 MAP3K19Q56UN5 1328 aa8.81□□□□□ -1
SYNPO2-203ENST00000434046 VAMP4O75379 141 aa8.81□□□□□ -1
SYNPO2-203ENST00000434046 SRCIN1Q9C0H9 1055 aa8.81□□□□□ -1
SYNPO2-203ENST00000434046 TRMT1Q9NXH9 659 aaKnown RBP8.81□□□□□ -1
SYNPO2-203ENST00000434046 QRICH2Q9H0J4 1663 aa8.81□□□□□ -1
SYNPO2-203ENST00000434046 ZC3H6P61129 1189 aaKnown RBP8.81□□□□□ -1
SYNPO2-203ENST00000434046 UBE2HP62256 183 aa8.81□□□□□ -1
SYNPO2-203ENST00000434046 GORABQ5T7V8 394 aa8.81□□□□□ -1
SYNPO2-203ENST00000434046 BICD2Q8TD16 824 aa8.81□□□□□ -1
SYNPO2-203ENST00000434046 MROH1Q8NDA8 1641 aa8.8□□□□□ -1
SYNPO2-203ENST00000434046 HTATSF1O43719 755 aaKnown RBP8.8□□□□□ -1
SYNPO2-203ENST00000434046 GNAI3P08754 354 aa8.8□□□□□ -1
SYNPO2-203ENST00000434046 LRMPQ12912 555 aa8.8□□□□□ -1
SYNPO2-203ENST00000434046 DDX54Q8TDD1 881 aaKnown RBP8.8□□□□□ -1
SYNPO2-203ENST00000434046 C9orf78Q9NZ63 289 aaPredicted RBP8.8□□□□□ -1
SYNPO2-203ENST00000434046 KIAA1210Q9ULL0 1709 aa8.8□□□□□ -1
SYNPO2-203ENST00000434046 PTPRMP28827 1452 aa8.8□□□□□ -1
SYNPO2-203ENST00000434046 BECN2A8MW95 431 aa8.8□□□□□ -1
SYNPO2-203ENST00000434046 ZRSR1Q15695 479 aaKnown RBP8.8□□□□□ -1
SYNPO2-203ENST00000434046 FILIP1Q7Z7B0 1213 aa8.8□□□□□ -1
SYNPO2-203ENST00000434046 RPAP2Q8IXW5 612 aaPredicted RBP8.8□□□□□ -1
SYNPO2-203ENST00000434046 KIAA1524Q8TCG1 905 aa8.8□□□□□ -1
SYNPO2-203ENST00000434046 NEXMIFQ5QGS0 1516 aa8.8□□□□□ -1
SYNPO2-203ENST00000434046 PLEKHG3A1L390 1219 aa8.79□□□□□ -1
SYNPO2-203ENST00000434046 UBTFL1P0CB47 393 aaPredicted RBP8.79□□□□□ -1
SYNPO2-203ENST00000434046 GTF2F1P35269 517 aaKnown RBP eCLIP8.79□□□□□ -1
SYNPO2-203ENST00000434046 LUZP1Q86V48 1076 aa8.79□□□□□ -1
SYNPO2-203ENST00000434046 PLEKHF1Q96S99 279 aa8.79□□□□□ -1
SYNPO2-203ENST00000434046 NUP62CLQ9H1M0 184 aa8.79□□□□□ -1
SYNPO2-203ENST00000434046 TNMDQ9H2S6 317 aa8.79□□□□□ -1
SYNPO2-203ENST00000434046 CALCOCO1Q9P1Z2 691 aa8.79□□□□□ -1
SYNPO2-203ENST00000434046 PALD1Q9ULE6 856 aa8.79□□□□□ -1
SYNPO2-203ENST00000434046 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.79□□□□□ -1
SYNPO2-203ENST00000434046 NRXN1Q9ULB1 1477 aa8.79□□□□□ -1
SYNPO2-203ENST00000434046 ALKQ9UM73 1620 aa8.79□□□□□ -1
SYNPO2-203ENST00000434046 STX6O43752 255 aa8.79□□□□□ -1
SYNPO2-203ENST00000434046 CCT4P50991 539 aaKnown RBP8.79□□□□□ -1
SYNPO2-203ENST00000434046 GABPB1Q06547 395 aaPredicted RBP8.79□□□□□ -1
SYNPO2-203ENST00000434046 TTC5Q8N0Z6 440 aa8.79□□□□□ -1
SYNPO2-203ENST00000434046 TRIM34Q9BYJ4 488 aa8.79□□□□□ -1
SYNPO2-203ENST00000434046 DNM1Q05193 864 aaKnown RBP8.79□□□□□ -1
SYNPO2-203ENST00000434046 MAP3K11Q16584 847 aa8.79□□□□□ -1
SYNPO2-203ENST00000434046 KRT24Q2M2I5 525 aa8.79□□□□□ -1
SYNPO2-203ENST00000434046 CCDC83Q8IWF9 413 aa8.79□□□□□ -1
SYNPO2-203ENST00000434046 MEIS3Q99687 375 aa8.79□□□□□ -1
SYNPO2-203ENST00000434046 ADAMTSL3P82987 1691 aa8.79□□□□□ -1
SYNPO2-203ENST00000434046 FLT4P35916 1363 aa8.79□□□□□ -1
SYNPO2-203ENST00000434046 ROBO2Q9HCK4 1378 aa8.79□□□□□ -1
SYNPO2-203ENST00000434046 SMTNL1A8MU46 457 aa8.78□□□□□ -1
SYNPO2-203ENST00000434046 POLR3GO15318 223 aaPredicted RBP8.78□□□□□ -1
SYNPO2-203ENST00000434046 GNAI2P04899 355 aa8.78□□□□□ -1
SYNPO2-203ENST00000434046 ZSCAN22P10073 491 aaPredicted RBP8.78□□□□□ -1
SYNPO2-203ENST00000434046 NCBP1Q09161 790 aaKnown RBP8.78□□□□□ -1
SYNPO2-203ENST00000434046 CEP135Q66GS9 1140 aa8.78□□□□□ -1
SYNPO2-203ENST00000434046 TMEM51Q9NW97 253 aa8.78□□□□□ -1
SYNPO2-203ENST00000434046 PRR36Q9H6K5 1346 aa8.78□□□□□ -1
SYNPO2-203ENST00000434046 TULP4Q9NRJ4 1543 aa8.78□□□□□ -1
SYNPO2-203ENST00000434046 F6X3S4 739 aa8.78□□□□□ -1
SYNPO2-203ENST00000434046 PDE1AP54750 535 aa8.78□□□□□ -1
SYNPO2-203ENST00000434046 AIMP1Q12904 312 aaKnown RBP8.78□□□□□ -1
SYNPO2-203ENST00000434046 TAF7Q15545 349 aaPredicted RBP8.78□□□□□ -1
SYNPO2-203ENST00000434046 PTPN14Q15678 1187 aa8.78□□□□□ -1
SYNPO2-203ENST00000434046 ANKRD44Q8N8A2 993 aa8.78□□□□□ -1
SYNPO2-203ENST00000434046 ARHGAP45Q92619 1136 aa8.78□□□□□ -1
SYNPO2-203ENST00000434046 ESYT1Q9BSJ8 1104 aa8.78□□□□□ -1
SYNPO2-203ENST00000434046 IL1RAPL2Q9NP60 686 aa8.78□□□□□ -1
SYNPO2-203ENST00000434046 MTHFSDQ2M296 383 aaKnown RBP8.78□□□□□ -1
SYNPO2-203ENST00000434046 EYA1Q99502 592 aa8.78□□□□□ -1
SYNPO2-203ENST00000434046 CLIP2Q9UDT6 1046 aa8.78□□□□□ -1
SYNPO2-203ENST00000434046 ATP7BP35670 1465 aa8.78□□□□□ -1
SYNPO2-203ENST00000434046 MROH2AA6NES4 1674 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms