RNA–Protein interactions for RNA: ENST00000433298.5

LRCH3-205, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 977 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-205ENST00000433298 NLGN1Q8N2Q7 840 aa10.64□□□□□ -0.71
LRCH3-205ENST00000433298 RAPGEF4Q8WZA2 1011 aa10.64□□□□□ -0.71
LRCH3-205ENST00000433298 NBPF4Q96M43 638 aa10.64□□□□□ -0.71
LRCH3-205ENST00000433298 METRNQ9UJH8 293 aa10.64□□□□□ -0.71
LRCH3-205ENST00000433298 PCDHB13Q9Y5F0 798 aa10.64□□□□□ -0.71
LRCH3-205ENST00000433298 MON2Q7Z3U7 1717 aa10.64□□□□□ -0.71
LRCH3-205ENST00000433298 USP31Q70CQ4 1352 aa10.64□□□□□ -0.71
LRCH3-205ENST00000433298 TATP17735 454 aaPredicted RBP10.63□□□□□ -0.71
LRCH3-205ENST00000433298 LMNB1P20700 586 aa10.63□□□□□ -0.71
LRCH3-205ENST00000433298 HMGB2P26583 209 aaKnown RBP10.63□□□□□ -0.71
LRCH3-205ENST00000433298 TMC1Q8TDI8 760 aa10.63□□□□□ -0.71
LRCH3-205ENST00000433298 ARHGEF1Q92888 912 aaKnown RBP10.63□□□□□ -0.71
LRCH3-205ENST00000433298 RTCBQ9Y3I0 505 aaKnown RBP10.63□□□□□ -0.71
LRCH3-205ENST00000433298 GYS1P13807 737 aa10.62□□□□□ -0.71
LRCH3-205ENST00000433298 HOXC9P31274 260 aa10.62□□□□□ -0.71
LRCH3-205ENST00000433298 ASAP1Q9ULH1 1129 aa10.62□□□□□ -0.71
LRCH3-205ENST00000433298 VIRMAQ69YN4 1812 aaKnown RBP10.62□□□□□ -0.71
LRCH3-205ENST00000433298 PCDH11XQ9BZA7 1347 aa10.61□□□□□ -0.71
LRCH3-205ENST00000433298 PCDH11YQ9BZA8 1340 aa10.61□□□□□ -0.71
LRCH3-205ENST00000433298 MAP2P11137 1827 aaKnown RBP10.61□□□□□ -0.71
LRCH3-205ENST00000433298 CYP27B1O15528 508 aa10.61□□□□□ -0.71
LRCH3-205ENST00000433298 RFC4P35249 363 aa10.61□□□□□ -0.71
LRCH3-205ENST00000433298 ATN1P54259 1190 aaPredicted RBP10.61□□□□□ -0.71
LRCH3-205ENST00000433298 BMP2KQ9NSY1 1161 aaPredicted RBP10.61□□□□□ -0.71
LRCH3-205ENST00000433298 SRP68Q9UHB9 627 aaKnown RBP10.61□□□□□ -0.71
LRCH3-205ENST00000433298 SBNO2Q9Y2G9 1366 aa10.61□□□□□ -0.71
LRCH3-205ENST00000433298 MAP3K19Q56UN5 1328 aa10.6□□□□□ -0.71
LRCH3-205ENST00000433298 TNRC18O15417 2968 aaPredicted RBP10.6□□□□□ -0.71
LRCH3-205ENST00000433298 TMEM88BA6NKF7 163 aa10.6□□□□□ -0.71
LRCH3-205ENST00000433298 DPY19L2Q6NUT2 758 aa10.6□□□□□ -0.71
LRCH3-205ENST00000433298 PAXIP1Q6ZW49 1069 aaPredicted RBP10.6□□□□□ -0.71
LRCH3-205ENST00000433298 DDR1Q08345 913 aa10.59□□□□□ -0.71
LRCH3-205ENST00000433298 MCOLN1Q9GZU1 580 aa10.59□□□□□ -0.71
LRCH3-205ENST00000433298 WDR33Q9C0J8 1336 aaKnown RBP10.58□□□□□ -0.71
LRCH3-205ENST00000433298 ZC3H4Q9UPT8 1303 aaKnown RBP10.58□□□□□ -0.71
LRCH3-205ENST00000433298 DDNO94850 711 aaPredicted RBP10.58□□□□□ -0.72
LRCH3-205ENST00000433298 SOX10P56693 466 aa10.58□□□□□ -0.72
LRCH3-205ENST00000433298 RRS1Q15050 365 aaKnown RBP10.58□□□□□ -0.72
LRCH3-205ENST00000433298 DEFB115Q30KQ5 88 aa10.58□□□□□ -0.72
LRCH3-205ENST00000433298 EAPPQ56P03 285 aaPredicted RBP10.58□□□□□ -0.72
LRCH3-205ENST00000433298 TMOD3Q9NYL9 352 aa10.58□□□□□ -0.72
LRCH3-205ENST00000433298 ABT1Q9ULW3 272 aaKnown RBP10.58□□□□□ -0.72
LRCH3-205ENST00000433298 KDM6AO15550 1401 aaPredicted RBP10.58□□□□□ -0.72
LRCH3-205ENST00000433298 PASKQ96RG2 1323 aa10.58□□□□□ -0.72
LRCH3-205ENST00000433298 MAP2K1Q02750 393 aaPredicted RBP10.57□□□□□ -0.72
LRCH3-205ENST00000433298 GSE1Q14687 1217 aa10.57□□□□□ -0.72
LRCH3-205ENST00000433298 HDGFL2Q7Z4V5 671 aaPredicted RBP10.57□□□□□ -0.72
LRCH3-205ENST00000433298 CD163L1Q9NR16 1453 aa10.56□□□□□ -0.72
LRCH3-205ENST00000433298 NFKBIEO00221 500 aa10.56□□□□□ -0.72
LRCH3-205ENST00000433298 ERFEQ4G0M1 354 aa10.56□□□□□ -0.72
LRCH3-205ENST00000433298 BEGAINQ9BUH8 593 aa10.56□□□□□ -0.72
LRCH3-205ENST00000433298 SLC12A5Q9H2X9 1139 aa10.56□□□□□ -0.72
LRCH3-205ENST00000433298 TRPC6Q9Y210 931 aa10.56□□□□□ -0.72
LRCH3-205ENST00000433298 CGNL1Q0VF96 1302 aa10.56□□□□□ -0.72
LRCH3-205ENST00000433298 PDE4DIPQ5VU43 2346 aa10.55□□□□□ -0.72
LRCH3-205ENST00000433298 TTLL13PA6NNM8 815 aa10.55□□□□□ -0.72
LRCH3-205ENST00000433298 DGKZQ13574 1117 aa10.55□□□□□ -0.72
LRCH3-205ENST00000433298 SLC4A9Q96Q91 983 aa10.55□□□□□ -0.72
LRCH3-205ENST00000433298 ATG3Q9NT62 314 aa10.55□□□□□ -0.72
LRCH3-205ENST00000433298 MAMSTRQ6ZN01 415 aa10.54□□□□□ -0.72
LRCH3-205ENST00000433298 IFNL1Q8IU54 200 aa10.54□□□□□ -0.72
LRCH3-205ENST00000433298 COG3Q96JB2 828 aa10.54□□□□□ -0.72
LRCH3-205ENST00000433298 EDC4Q6P2E9 1401 aaKnown RBP10.53□□□□□ -0.72
LRCH3-205ENST00000433298 SMG6Q86US8 1419 aaKnown RBP10.53□□□□□ -0.72
LRCH3-205ENST00000433298 POTEB2H3BUK9 544 aa10.53□□□□□ -0.72
LRCH3-205ENST00000433298 RPS6KA4O75676 772 aa10.53□□□□□ -0.72
LRCH3-205ENST00000433298 MAP1SQ66K74 1059 aaPredicted RBP10.53□□□□□ -0.72
LRCH3-205ENST00000433298 CYP4F22Q6NT55 531 aa10.53□□□□□ -0.72
LRCH3-205ENST00000433298 LDHDQ86WU2 507 aa10.53□□□□□ -0.72
LRCH3-205ENST00000433298 TTLL6Q8N841 843 aa10.53□□□□□ -0.72
LRCH3-205ENST00000433298 CASP8AP2Q9UKL3 1982 aa10.53□□□□□ -0.72
LRCH3-205ENST00000433298 A0A1W2PP64 1363 aa10.52□□□□□ -0.72
LRCH3-205ENST00000433298 RASSF10A6NK89 507 aa10.52□□□□□ -0.73
LRCH3-205ENST00000433298 POLRMTO00411 1230 aaKnown RBP10.52□□□□□ -0.73
LRCH3-205ENST00000433298 AOC2O75106 756 aa10.52□□□□□ -0.73
LRCH3-205ENST00000433298 ITGBL1O95965 494 aaPredicted RBP10.52□□□□□ -0.73
LRCH3-205ENST00000433298 PYGBP11216 843 aa10.52□□□□□ -0.73
LRCH3-205ENST00000433298 FMR1Q06787 632 aaKnown RBP eCLIP10.52□□□□□ -0.738e-8■■■■■ 27.8
LRCH3-205ENST00000433298 PRPF38BQ5VTL8 546 aaKnown RBP10.52□□□□□ -0.73
LRCH3-205ENST00000433298 C2CD5Q86YS7 1000 aa10.52□□□□□ -0.73
LRCH3-205ENST00000433298 C21orf2O43822 256 aa10.51□□□□□ -0.73
LRCH3-205ENST00000433298 HSP90AB2PQ58FF8 381 aa10.51□□□□□ -0.73
LRCH3-205ENST00000433298 ZNF622Q969S3 477 aaKnown RBP eCLIP10.51□□□□□ -0.736e-18■□□□□ 10.5
LRCH3-205ENST00000433298 OTUD5Q96G74 571 aa10.51□□□□□ -0.73
LRCH3-205ENST00000433298 CAPNS2Q96L46 248 aa10.51□□□□□ -0.73
LRCH3-205ENST00000433298 TAF1DQ9H5J8 278 aaPredicted RBP10.51□□□□□ -0.73
LRCH3-205ENST00000433298 SEC24BO95487 1268 aa10.5□□□□□ -0.73
LRCH3-205ENST00000433298 IER5LQ5T953 404 aa10.5□□□□□ -0.73
LRCH3-205ENST00000433298 GPR101Q96P66 508 aaPredicted RBP10.5□□□□□ -0.73
LRCH3-205ENST00000433298 TRIM35Q9UPQ4 493 aa10.5□□□□□ -0.73
LRCH3-205ENST00000433298 USP42Q9H9J4 1324 aaKnown RBP10.5□□□□□ -0.73
LRCH3-205ENST00000433298 MYH14Q7Z406 1995 aaKnown RBP10.5□□□□□ -0.73
LRCH3-205ENST00000433298 KDRP35968 1356 aa10.5□□□□□ -0.73
LRCH3-205ENST00000433298 USPL1Q5W0Q7 1092 aa10.49□□□□□ -0.73
LRCH3-205ENST00000433298 CNTROBQ8N137 903 aa10.49□□□□□ -0.73
LRCH3-205ENST00000433298 CCDC24Q8N4L8 307 aa10.49□□□□□ -0.73
LRCH3-205ENST00000433298 TMEM106CQ9BVX2 250 aa10.49□□□□□ -0.73
LRCH3-205ENST00000433298 TERF2IPQ9NYB0 399 aa10.49□□□□□ -0.73
LRCH3-205ENST00000433298 CNTNAP4Q9C0A0 1308 aa10.49□□□□□ -0.73
LRCH3-205ENST00000433298 COL5A3P25940 1745 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms