RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 FOXD4L3Q6VB84 417 aaPredicted RBP8.2□□□□□ -1.1
NIPAL3-205ENST00000432012 ADGRG1Q9Y653 693 aa8.2□□□□□ -1.1
NIPAL3-205ENST00000432012 PTPRUQ92729 1446 aa8.19□□□□□ -1.1
NIPAL3-205ENST00000432012 TMEM121BQ9BXQ6 578 aaPredicted RBP8.19□□□□□ -1.1
NIPAL3-205ENST00000432012 MYO5BQ9ULV0 1848 aa8.19□□□□□ -1.1
NIPAL3-205ENST00000432012 NAALADL2Q58DX5 795 aa8.19□□□□□ -1.1
NIPAL3-205ENST00000432012 NPAS4Q8IUM7 802 aa8.19□□□□□ -1.1
NIPAL3-205ENST00000432012 DDX17Q92841 729 aaKnown RBP8.19□□□□□ -1.1
NIPAL3-205ENST00000432012 HLA-CQ95604 372 aa8.19□□□□□ -1.1
NIPAL3-205ENST00000432012 SUGT1Q9Y2Z0 365 aa8.19□□□□□ -1.1
NIPAL3-205ENST00000432012 USP32Q8NFA0 1604 aa8.19□□□□□ -1.1
NIPAL3-205ENST00000432012 ADGRL2O95490 1459 aa8.19□□□□□ -1.1
NIPAL3-205ENST00000432012 FAM83GA6ND36 823 aa8.18□□□□□ -1.1
NIPAL3-205ENST00000432012 EZH2Q15910 746 aaKnown RBP8.18□□□□□ -1.1
NIPAL3-205ENST00000432012 NUP188Q5SRE5 1749 aa8.18□□□□□ -1.1
NIPAL3-205ENST00000432012 SPTLC1O15269 473 aa8.18□□□□□ -1.1
NIPAL3-205ENST00000432012 PRELPP51888 382 aa8.18□□□□□ -1.1
NIPAL3-205ENST00000432012 DNAJC2Q99543 621 aaKnown RBP8.18□□□□□ -1.1
NIPAL3-205ENST00000432012 TEX2Q8IWB9 1127 aa8.17□□□□□ -1.1
NIPAL3-205ENST00000432012 DLC1Q96QB1 1528 aa8.17□□□□□ -1.1
NIPAL3-205ENST00000432012 ZC3H4Q9UPT8 1303 aaKnown RBP8.17□□□□□ -1.1
NIPAL3-205ENST00000432012 MARSP56192 900 aaKnown RBP8.17□□□□□ -1.1
NIPAL3-205ENST00000432012 PLCH1Q4KWH8 1693 aa8.17□□□□□ -1.1
NIPAL3-205ENST00000432012 EP400Q96L91 3159 aa8.17□□□□□ -1.1
NIPAL3-205ENST00000432012 PXDNQ92626 1479 aa8.17□□□□□ -1.1
NIPAL3-205ENST00000432012 TONSLQ96HA7 1378 aa8.17□□□□□ -1.1
NIPAL3-205ENST00000432012 C7P10643 843 aa8.16□□□□□ -1.1
NIPAL3-205ENST00000432012 HSPA6P17066 643 aa8.16□□□□□ -1.1
NIPAL3-205ENST00000432012 EVI5LQ96CN4 794 aa8.16□□□□□ -1.1
NIPAL3-205ENST00000432012 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.16□□□□□ -1.1
NIPAL3-205ENST00000432012 PCDHGA10Q9Y5H3 936 aa8.16□□□□□ -1.1
NIPAL3-205ENST00000432012 C11orf95C9JLR9 678 aaPredicted RBP8.16□□□□□ -1.1
NIPAL3-205ENST00000432012 GUCA2AQ02747 115 aa8.16□□□□□ -1.1
NIPAL3-205ENST00000432012 FAM196AQ6ZSG2 479 aa8.16□□□□□ -1.1
NIPAL3-205ENST00000432012 EXOC8Q8IYI6 725 aa8.16□□□□□ -1.1
NIPAL3-205ENST00000432012 DEPDC4Q8N2C3 294 aa8.16□□□□□ -1.1
NIPAL3-205ENST00000432012 TSC1Q92574 1164 aa8.16□□□□□ -1.1
NIPAL3-205ENST00000432012 KIF15Q9NS87 1388 aa8.16□□□□□ -1.1
NIPAL3-205ENST00000432012 A0A0G2JS52 829 aa8.16□□□□□ -1.1
NIPAL3-205ENST00000432012 GABBR2O75899 941 aa8.16□□□□□ -1.1
NIPAL3-205ENST00000432012 PLCG2P16885 1265 aa8.16□□□□□ -1.1
NIPAL3-205ENST00000432012 TSNAXIP1Q2TAA8 658 aa8.16□□□□□ -1.1
NIPAL3-205ENST00000432012 PRM3Q9NNZ6 103 aa8.16□□□□□ -1.1
NIPAL3-205ENST00000432012 SOWAHDA6NJG2 315 aa8.15□□□□□ -1.1
NIPAL3-205ENST00000432012 SGSM3Q96HU1 749 aa8.15□□□□□ -1.1
NIPAL3-205ENST00000432012 BIN2Q9UBW5 565 aaPredicted RBP8.15□□□□□ -1.1
NIPAL3-205ENST00000432012 NRKQ7Z2Y5 1582 aa8.15□□□□□ -1.11
NIPAL3-205ENST00000432012 IQGAP3Q86VI3 1631 aa8.15□□□□□ -1.11
NIPAL3-205ENST00000432012 POTEFA5A3E0 1075 aa8.15□□□□□ -1.11
NIPAL3-205ENST00000432012 CDCA7Q9BWT1 371 aaPredicted RBP8.15□□□□□ -1.11
NIPAL3-205ENST00000432012 CROCC2H7BZ55 1655 aa8.15□□□□□ -1.11
NIPAL3-205ENST00000432012 MAP4K4O95819 1239 aaPredicted RBP8.14□□□□□ -1.11
NIPAL3-205ENST00000432012 SSFA2P28290 1259 aa8.14□□□□□ -1.11
NIPAL3-205ENST00000432012 CRTC2Q53ET0 693 aaPredicted RBP8.14□□□□□ -1.11
NIPAL3-205ENST00000432012 NAP1L5Q96NT1 182 aaPredicted RBP8.14□□□□□ -1.11
NIPAL3-205ENST00000432012 MYOM3Q5VTT5 1437 aa8.14□□□□□ -1.11
NIPAL3-205ENST00000432012 RGPD3A6NKT7 1758 aaPredicted RBP8.14□□□□□ -1.11
NIPAL3-205ENST00000432012 RGPD4Q7Z3J3 1758 aa8.14□□□□□ -1.11
NIPAL3-205ENST00000432012 ZC3H6P61129 1189 aaKnown RBP8.14□□□□□ -1.11
NIPAL3-205ENST00000432012 WASHC4Q2M389 1173 aa8.14□□□□□ -1.11
NIPAL3-205ENST00000432012 DPH6Q7L8W6 267 aa8.14□□□□□ -1.11
NIPAL3-205ENST00000432012 AATKQ6ZMQ8 1374 aa8.13□□□□□ -1.11
NIPAL3-205ENST00000432012 MAP3K5Q99683 1374 aa8.13□□□□□ -1.11
NIPAL3-205ENST00000432012 G3V3G9 751 aa8.13□□□□□ -1.11
NIPAL3-205ENST00000432012 SEC24BO95487 1268 aa8.13□□□□□ -1.11
NIPAL3-205ENST00000432012 APBA3O96018 575 aa8.13□□□□□ -1.11
NIPAL3-205ENST00000432012 ANO2Q9NQ90 1003 aa8.13□□□□□ -1.11
NIPAL3-205ENST00000432012 FANCIQ9NVI1 1328 aa8.13□□□□□ -1.11
NIPAL3-205ENST00000432012 HFM1A2PYH4 1435 aa8.13□□□□□ -1.11
NIPAL3-205ENST00000432012 ABCC5O15440 1437 aa8.13□□□□□ -1.11
NIPAL3-205ENST00000432012 PRAG1Q86YV5 1406 aa8.13□□□□□ -1.11
NIPAL3-205ENST00000432012 NOVA2Q9UNW9 492 aaKnown RBP8.13□□□□□ -1.11
NIPAL3-205ENST00000432012 THSD7AQ9UPZ6 1657 aa8.12□□□□□ -1.11
NIPAL3-205ENST00000432012 CASZ1Q86V15 1759 aa8.12□□□□□ -1.11
NIPAL3-205ENST00000432012 TPD52L2O43399 206 aaKnown RBP8.12□□□□□ -1.11
NIPAL3-205ENST00000432012 ORAI2Q96SN7 254 aa8.12□□□□□ -1.11
NIPAL3-205ENST00000432012 C3orf80F5H4A9 247 aa8.12□□□□□ -1.11
NIPAL3-205ENST00000432012 OATP04181 439 aa8.12□□□□□ -1.11
NIPAL3-205ENST00000432012 CD46P15529 392 aa8.12□□□□□ -1.11
NIPAL3-205ENST00000432012 HNRNPUQ00839 825 aaKnown RBP eCLIP8.12□□□□□ -1.11
NIPAL3-205ENST00000432012 FAM9BQ8IZU0 186 aa8.12□□□□□ -1.11
NIPAL3-205ENST00000432012 KIF1AQ12756 1690 aa8.12□□□□□ -1.11
NIPAL3-205ENST00000432012 CCDC144AA2RUR9 1427 aa8.11□□□□□ -1.11
NIPAL3-205ENST00000432012 DDX11L8A8MPP1 907 aa8.11□□□□□ -1.11
NIPAL3-205ENST00000432012 NRAPQ86VF7 1730 aa8.11□□□□□ -1.11
NIPAL3-205ENST00000432012 CNPY4Q8N129 248 aa8.11□□□□□ -1.11
NIPAL3-205ENST00000432012 NRXN3Q9Y4C0 1643 aa8.11□□□□□ -1.11
NIPAL3-205ENST00000432012 MYOM1P52179 1685 aa8.11□□□□□ -1.11
NIPAL3-205ENST00000432012 IER5LQ5T953 404 aa8.11□□□□□ -1.11
NIPAL3-205ENST00000432012 UBXN4Q92575 508 aa8.11□□□□□ -1.11
NIPAL3-205ENST00000432012 L3MBTL3Q96JM7 780 aaPredicted RBP8.11□□□□□ -1.11
NIPAL3-205ENST00000432012 CDC42BPGQ6DT37 1551 aa8.11□□□□□ -1.11
NIPAL3-205ENST00000432012 SPATA31A3Q5VYP0 1347 aa8.1□□□□□ -1.11
NIPAL3-205ENST00000432012 PCDHGC3Q9UN70 934 aa8.1□□□□□ -1.11
NIPAL3-205ENST00000432012 SHANK3Q9BYB0 1731 aa8.1□□□□□ -1.11
NIPAL3-205ENST00000432012 DIXDC1Q155Q3 683 aa8.1□□□□□ -1.11
NIPAL3-205ENST00000432012 SYT17Q9BSW7 474 aa8.1□□□□□ -1.11
NIPAL3-205ENST00000432012 ATP9BO43861 1147 aa8.09□□□□□ -1.11
NIPAL3-205ENST00000432012 FAM98CQ17RN3 349 aaKnown RBP8.09□□□□□ -1.11
NIPAL3-205ENST00000432012 APBB1IPQ7Z5R6 666 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms