RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 POLR3DP05423 398 aaPredicted RBP11.96□□□□□ -0.5
SP1-202ENST00000426431 TSPY26PQ9H489 355 aa11.96□□□□□ -0.5
SP1-202ENST00000426431 DISP1Q96F81 1524 aa11.96□□□□□ -0.5
SP1-202ENST00000426431 ZFYP08048 801 aaPredicted RBP11.96□□□□□ -0.5
SP1-202ENST00000426431 DISP3Q9P2K9 1392 aa11.95□□□□□ -0.5
SP1-202ENST00000426431 CTCFLQ8NI51 663 aaPredicted RBP11.95□□□□□ -0.5
SP1-202ENST00000426431 NUP133Q8WUM0 1156 aa11.95□□□□□ -0.5
SP1-202ENST00000426431 JAKMIP1Q96N16 626 aaKnown RBP11.95□□□□□ -0.5
SP1-202ENST00000426431 ABCF2Q9UG63 623 aa11.95□□□□□ -0.5
SP1-202ENST00000426431 RFC4P35249 363 aa11.95□□□□□ -0.5
SP1-202ENST00000426431 PYM1Q9BRP8 204 aaKnown RBP11.95□□□□□ -0.5
SP1-202ENST00000426431 SLC4A3P48751 1232 aa11.95□□□□□ -0.5
SP1-202ENST00000426431 MKNK2Q9HBH9 465 aa11.95□□□□□ -0.5
SP1-202ENST00000426431 NAP1L1P55209 391 aaKnown RBP11.95□□□□□ -0.5
SP1-202ENST00000426431 BACH2Q9BYV9 841 aa11.95□□□□□ -0.5
SP1-202ENST00000426431 HMG20BQ9P0W2 317 aa11.95□□□□□ -0.5
SP1-202ENST00000426431 MTMR7Q9Y216 660 aa11.95□□□□□ -0.5
SP1-202ENST00000426431 CWC27Q6UX04 472 aaKnown RBP11.94□□□□□ -0.5
SP1-202ENST00000426431 MPHOSPH10O00566 681 aaKnown RBP11.94□□□□□ -0.5
SP1-202ENST00000426431 NPC1L1Q9UHC9 1359 aa11.94□□□□□ -0.5
SP1-202ENST00000426431 IL2RBP14784 551 aa11.94□□□□□ -0.5
SP1-202ENST00000426431 FOSBP53539 338 aa11.94□□□□□ -0.5
SP1-202ENST00000426431 ECHDC1Q9NTX5 307 aa11.94□□□□□ -0.5
SP1-202ENST00000426431 PIK3C2GO75747 1445 aa11.94□□□□□ -0.5
SP1-202ENST00000426431 MNS1Q8NEH6 495 aa11.94□□□□□ -0.5
SP1-202ENST00000426431 RUFY1Q96T51 708 aa11.94□□□□□ -0.5
SP1-202ENST00000426431 YTHDC2Q9H6S0 1430 aaKnown RBP11.94□□□□□ -0.5
SP1-202ENST00000426431 KIF20AO95235 890 aa11.94□□□□□ -0.5
SP1-202ENST00000426431 ME1P48163 572 aa11.94□□□□□ -0.5
SP1-202ENST00000426431 SIRT1Q96EB6 747 aa11.94□□□□□ -0.5
SP1-202ENST00000426431 RSPH6AQ9H0K4 717 aa11.94□□□□□ -0.5
SP1-202ENST00000426431 ZNF76P36508 570 aa11.94□□□□□ -0.5
SP1-202ENST00000426431 ZNF444Q8N0Y2 327 aaPredicted RBP11.94□□□□□ -0.5
SP1-202ENST00000426431 SAMD9Q5K651 1589 aa11.93□□□□□ -0.5
SP1-202ENST00000426431 NASPP49321 788 aaPredicted RBP11.93□□□□□ -0.5
SP1-202ENST00000426431 TEX35Q5T0J7 233 aa11.93□□□□□ -0.5
SP1-202ENST00000426431 IL1RAPL2Q9NP60 686 aa11.93□□□□□ -0.5
SP1-202ENST00000426431 ARHGEF10O15013 1369 aa11.93□□□□□ -0.5
SP1-202ENST00000426431 KIF5BP33176 963 aa11.93□□□□□ -0.5
SP1-202ENST00000426431 PPP1R12BO60237 982 aaPredicted RBP11.93□□□□□ -0.5
SP1-202ENST00000426431 DDB1Q16531 1140 aa11.93□□□□□ -0.5
SP1-202ENST00000426431 ANKRD13DQ6ZTN6 518 aa11.93□□□□□ -0.5
SP1-202ENST00000426431 KRI1Q8N9T8 703 aaKnown RBP11.93□□□□□ -0.5
SP1-202ENST00000426431 MPHOSPH6Q99547 160 aaKnown RBP11.93□□□□□ -0.5
SP1-202ENST00000426431 HLA-DOAP06340 250 aa11.93□□□□□ -0.5
SP1-202ENST00000426431 CUL5Q93034 780 aa11.93□□□□□ -0.5
SP1-202ENST00000426431 ARHGEF5Q12774 1597 aa11.92□□□□□ -0.5
SP1-202ENST00000426431 KCNA6P17658 529 aa11.92□□□□□ -0.5
SP1-202ENST00000426431 SMTNL1A8MU46 457 aa11.92□□□□□ -0.5
SP1-202ENST00000426431 CEP57L1Q8IYX8 460 aa11.92□□□□□ -0.5
SP1-202ENST00000426431 USHBP1Q8N6Y0 703 aa11.92□□□□□ -0.5
SP1-202ENST00000426431 DCAF5Q96JK2 942 aa11.92□□□□□ -0.5
SP1-202ENST00000426431 TRIM5Q9C035 493 aa11.92□□□□□ -0.5
SP1-202ENST00000426431 ZFYVE16Q7Z3T8 1539 aa11.92□□□□□ -0.5
SP1-202ENST00000426431 TRAK2O60296 914 aa11.92□□□□□ -0.5
SP1-202ENST00000426431 EXOC6BQ9Y2D4 811 aa11.92□□□□□ -0.5
SP1-202ENST00000426431 ATP2B1P20020 1258 aa11.92□□□□□ -0.5
SP1-202ENST00000426431 PDE4BQ07343 736 aa11.92□□□□□ -0.5
SP1-202ENST00000426431 MAP3K2Q9Y2U5 619 aa11.92□□□□□ -0.5
SP1-202ENST00000426431 PCDH11XQ9BZA7 1347 aa11.92□□□□□ -0.5
SP1-202ENST00000426431 PCDH11YQ9BZA8 1340 aa11.92□□□□□ -0.5
SP1-202ENST00000426431 MAGI2Q86UL8 1455 aa11.92□□□□□ -0.5
SP1-202ENST00000426431 MYO1BO43795 1136 aa11.92□□□□□ -0.5
SP1-202ENST00000426431 SCAND2PQ9GZW5 306 aaPredicted RBP11.92□□□□□ -0.5
SP1-202ENST00000426431 TNMDQ9H2S6 317 aa11.92□□□□□ -0.5
SP1-202ENST00000426431 ZNF213O14771 459 aa11.91□□□□□ -0.5
SP1-202ENST00000426431 LDHAL6AQ6ZMR3 332 aa11.91□□□□□ -0.5
SP1-202ENST00000426431 LRRFIP2Q9Y608 721 aaKnown RBP11.91□□□□□ -0.5
SP1-202ENST00000426431 PPP4R3AQ6IN85 833 aa11.91□□□□□ -0.5
SP1-202ENST00000426431 SPATA32Q96LK8 384 aa11.91□□□□□ -0.5
SP1-202ENST00000426431 EDC4Q6P2E9 1401 aaKnown RBP11.91□□□□□ -0.5
SP1-202ENST00000426431 FIBPO43427 364 aa11.91□□□□□ -0.5
SP1-202ENST00000426431 PPFIBP1Q86W92 1011 aa11.91□□□□□ -0.5
SP1-202ENST00000426431 FGFR1OPO95684 399 aaKnown RBP11.91□□□□□ -0.5
SP1-202ENST00000426431 PDE4CQ08493 712 aa11.91□□□□□ -0.5
SP1-202ENST00000426431 SETQ01105 290 aaPredicted RBP11.9□□□□□ -0.5
SP1-202ENST00000426431 NBPF6Q5VWK0 638 aa11.9□□□□□ -0.5
SP1-202ENST00000426431 CATIPQ7Z7H3 387 aa11.9□□□□□ -0.5
SP1-202ENST00000426431 NBPF5PQ86XG9 351 aaPredicted RBP11.9□□□□□ -0.5
SP1-202ENST00000426431 NBPF4Q96M43 638 aa11.9□□□□□ -0.5
SP1-202ENST00000426431 MBIPQ9NS73 344 aa11.9□□□□□ -0.5
SP1-202ENST00000426431 SETDB2Q96T68 719 aa11.9□□□□□ -0.5
SP1-202ENST00000426431 THUMPD2Q9BTF0 503 aaKnown RBP11.9□□□□□ -0.5
SP1-202ENST00000426431 MIS18AQ9NYP9 233 aa11.9□□□□□ -0.5
SP1-202ENST00000426431 DCTN1Q14203 1278 aa11.9□□□□□ -0.5
SP1-202ENST00000426431 NFKBIBQ15653 356 aa11.9□□□□□ -0.5
SP1-202ENST00000426431 TMEM266Q2M3C6 531 aa11.9□□□□□ -0.5
SP1-202ENST00000426431 BCL11BQ9C0K0 894 aaPredicted RBP11.9□□□□□ -0.5
SP1-202ENST00000426431 HOXB7P09629 217 aa11.9□□□□□ -0.5
SP1-202ENST00000426431 MTERF4Q7Z6M4 381 aaKnown RBP11.9□□□□□ -0.5
SP1-202ENST00000426431 TMTC2Q8N394 836 aa11.9□□□□□ -0.5
SP1-202ENST00000426431 ADGBQ8N7X0 1667 aa11.9□□□□□ -0.5
SP1-202ENST00000426431 HSP90AB2PQ58FF8 381 aa11.9□□□□□ -0.51
SP1-202ENST00000426431 CAVIN1Q6NZI2 390 aaKnown RBP11.9□□□□□ -0.51
SP1-202ENST00000426431 PDILTQ8N807 584 aa11.9□□□□□ -0.51
SP1-202ENST00000426431 CABP5Q9NP86 173 aa11.9□□□□□ -0.51
SP1-202ENST00000426431 HDAC9Q9UKV0 1011 aa11.9□□□□□ -0.51
SP1-202ENST00000426431 PARD3Q8TEW0 1356 aa11.89□□□□□ -0.51
SP1-202ENST00000426431 MAP3K5Q99683 1374 aa11.89□□□□□ -0.51
SP1-202ENST00000426431 CASTP20810 708 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms