RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 CFAP44Q96MT7 982 aa19.32■□□□□ 0.68
TMEM248-204ENST00000424964 UBR3Q6ZT12 1888 aa19.32■□□□□ 0.68
TMEM248-204ENST00000424964 CICQ96RK0 1608 aaPredicted RBP19.32■□□□□ 0.68
TMEM248-204ENST00000424964 PRAMEF22A3QJZ6 481 aa19.31■□□□□ 0.68
TMEM248-204ENST00000424964 ZBTB7AO95365 584 aa19.31■□□□□ 0.68
TMEM248-204ENST00000424964 SSFA2P28290 1259 aa19.31■□□□□ 0.68
TMEM248-204ENST00000424964 GNAI1P63096 354 aa19.31■□□□□ 0.68
TMEM248-204ENST00000424964 NGEFQ8N5V2 710 aa19.31■□□□□ 0.68
TMEM248-204ENST00000424964 IFT57Q9NWB7 429 aa19.31■□□□□ 0.68
TMEM248-204ENST00000424964 USP16Q9Y5T5 823 aa19.31■□□□□ 0.68
TMEM248-204ENST00000424964 CANXP27824 592 aaKnown RBP19.3■□□□□ 0.68
TMEM248-204ENST00000424964 TRAPPC3LQ5T215 181 aa19.3■□□□□ 0.68
TMEM248-204ENST00000424964 CASZ1Q86V15 1759 aa19.29■□□□□ 0.68
TMEM248-204ENST00000424964 GIGYF1O75420 1035 aaPredicted RBP19.29■□□□□ 0.68
TMEM248-204ENST00000424964 A1BGP04217 495 aa19.29■□□□□ 0.68
TMEM248-204ENST00000424964 ATF5Q9Y2D1 282 aaPredicted RBP19.29■□□□□ 0.68
TMEM248-204ENST00000424964 ZBTB1Q9Y2K1 713 aa19.29■□□□□ 0.68
TMEM248-204ENST00000424964 ZNF853P0CG23 659 aa19.28■□□□□ 0.68
TMEM248-204ENST00000424964 SLC16A10Q8TF71 515 aa19.28■□□□□ 0.68
TMEM248-204ENST00000424964 SPON1Q9HCB6 807 aa19.28■□□□□ 0.68
TMEM248-204ENST00000424964 MBIPQ9NS73 344 aa19.28■□□□□ 0.68
TMEM248-204ENST00000424964 ADRA2BP18089 450 aa19.27■□□□□ 0.68
TMEM248-204ENST00000424964 RFC4P35249 363 aa19.27■□□□□ 0.68
TMEM248-204ENST00000424964 WDR63Q8IWG1 891 aa19.27■□□□□ 0.68
TMEM248-204ENST00000424964 ARHGEF1Q92888 912 aaKnown RBP19.27■□□□□ 0.68
TMEM248-204ENST00000424964 MTFR1LQ9H019 292 aa19.27■□□□□ 0.68
TMEM248-204ENST00000424964 ZNF330Q9Y3S2 320 aaPredicted RBP19.26■□□□□ 0.67
TMEM248-204ENST00000424964 SOS1Q07889 1333 aaPredicted RBP19.25■□□□□ 0.67
TMEM248-204ENST00000424964 IL16Q14005 1332 aa19.25■□□□□ 0.67
TMEM248-204ENST00000424964 KRT24Q2M2I5 525 aa19.25■□□□□ 0.67
TMEM248-204ENST00000424964 NPM2Q86SE8 214 aaKnown RBP19.25■□□□□ 0.67
TMEM248-204ENST00000424964 EIF2S2P20042 333 aaKnown RBP19.24■□□□□ 0.67
TMEM248-204ENST00000424964 PIP4K2AP48426 406 aaPredicted RBP19.24■□□□□ 0.67
TMEM248-204ENST00000424964 MSL1Q68DK7 614 aa19.23■□□□□ 0.67
TMEM248-204ENST00000424964 TSR2Q969E8 191 aaKnown RBP19.23■□□□□ 0.67
TMEM248-204ENST00000424964 ARXQ96QS3 562 aa19.23■□□□□ 0.67
TMEM248-204ENST00000424964 LAMB4A4D0S4 1761 aa19.22■□□□□ 0.67
TMEM248-204ENST00000424964 IL6STP40189 918 aaPredicted RBP19.22■□□□□ 0.67
TMEM248-204ENST00000424964 EIF5P55010 431 aaKnown RBP19.22■□□□□ 0.67
TMEM248-204ENST00000424964 DUSP27Q5VZP5 1158 aa19.22■□□□□ 0.67
TMEM248-204ENST00000424964 COL15A1P39059 1388 aa19.21■□□□□ 0.67
TMEM248-204ENST00000424964 A0A087WZG4 1122 aa19.21■□□□□ 0.67
TMEM248-204ENST00000424964 ELL2O00472 640 aaPredicted RBP19.21■□□□□ 0.67
TMEM248-204ENST00000424964 ZPR1O75312 459 aa19.21■□□□□ 0.67
TMEM248-204ENST00000424964 NECTIN2Q92692 538 aa19.21■□□□□ 0.67
TMEM248-204ENST00000424964 SRP68Q9UHB9 627 aaKnown RBP19.21■□□□□ 0.67
TMEM248-204ENST00000424964 NBPF26B4DH59 902 aa19.2■□□□□ 0.66
TMEM248-204ENST00000424964 POLD1P28340 1107 aa19.2■□□□□ 0.66
TMEM248-204ENST00000424964 NBPF10Q6P3W6 841 aaKnown RBP19.2■□□□□ 0.66
TMEM248-204ENST00000424964 NBPF15Q8N660 670 aa19.2■□□□□ 0.66
TMEM248-204ENST00000424964 PTGER2P43116 358 aa19.19■□□□□ 0.66
TMEM248-204ENST00000424964 PPP1R1BQ9UD71 204 aaPredicted RBP19.19■□□□□ 0.66
TMEM248-204ENST00000424964 C4AP0C0L4 1744 aa19.19■□□□□ 0.66
TMEM248-204ENST00000424964 HOXB7P09629 217 aa19.18■□□□□ 0.66
TMEM248-204ENST00000424964 GYS1P13807 737 aa19.18■□□□□ 0.66
TMEM248-204ENST00000424964 MYL6BP14649 208 aa19.18■□□□□ 0.66
TMEM248-204ENST00000424964 GOLGA2Q08379 1002 aa19.18■□□□□ 0.66
TMEM248-204ENST00000424964 C8orf58Q8NAV2 365 aa19.18■□□□□ 0.66
TMEM248-204ENST00000424964 MYH16Q9H6N6 1097 aa19.18■□□□□ 0.66
TMEM248-204ENST00000424964 SPINK5Q9NQ38 1064 aaPredicted RBP19.18■□□□□ 0.66
TMEM248-204ENST00000424964 NARFQ9UHQ1 456 aa19.18■□□□□ 0.66
TMEM248-204ENST00000424964 TBC1D2BQ9UPU7 963 aa19.18■□□□□ 0.66
TMEM248-204ENST00000424964 ZNF521Q96K83 1311 aa19.18■□□□□ 0.66
TMEM248-204ENST00000424964 USP42Q9H9J4 1324 aaKnown RBP19.18■□□□□ 0.66
TMEM248-204ENST00000424964 HDGFL1Q5TGJ6 251 aa19.17■□□□□ 0.66
TMEM248-204ENST00000424964 USPL1Q5W0Q7 1092 aa19.17■□□□□ 0.66
TMEM248-204ENST00000424964 DZIP3Q86Y13 1208 aaKnown RBP19.17■□□□□ 0.66
TMEM248-204ENST00000424964 NLGN1Q8N2Q7 840 aa19.17■□□□□ 0.66
TMEM248-204ENST00000424964 ERBB4Q15303 1308 aa19.17■□□□□ 0.66
TMEM248-204ENST00000424964 FANCIQ9NVI1 1328 aa19.17■□□□□ 0.66
TMEM248-204ENST00000424964 LRP5O75197 1615 aa19.17■□□□□ 0.66
TMEM248-204ENST00000424964 HNRNPUQ00839 825 aaKnown RBP eCLIP19.16■□□□□ 0.66
TMEM248-204ENST00000424964 SGIP1Q9BQI5 828 aa19.16■□□□□ 0.66
TMEM248-204ENST00000424964 FKBP8Q14318 412 aa19.15■□□□□ 0.66
TMEM248-204ENST00000424964 TSPYL6Q8N831 410 aa19.15■□□□□ 0.66
TMEM248-204ENST00000424964 ANXA1P04083 346 aa19.14■□□□□ 0.65
TMEM248-204ENST00000424964 E9PSI1 815 aa19.13■□□□□ 0.65
TMEM248-204ENST00000424964 MMP10P09238 476 aa19.13■□□□□ 0.65
TMEM248-204ENST00000424964 EXOSC9Q06265 439 aaKnown RBP19.13■□□□□ 0.65
TMEM248-204ENST00000424964 PDIA6Q15084 440 aa19.13■□□□□ 0.65
TMEM248-204ENST00000424964 PROSER3Q2NL68 480 aa19.13■□□□□ 0.65
TMEM248-204ENST00000424964 TWISTNBQ3B726 338 aaPredicted RBP19.13■□□□□ 0.65
TMEM248-204ENST00000424964 CHMP4AQ9BY43 222 aa19.13■□□□□ 0.65
TMEM248-204ENST00000424964 DDX21Q9NR30 783 aaKnown RBP eCLIP19.13■□□□□ 0.65
TMEM248-204ENST00000424964 CHPF2Q9P2E5 772 aa19.13■□□□□ 0.65
TMEM248-204ENST00000424964 COL24A1Q17RW2 1714 aa19.12■□□□□ 0.65
TMEM248-204ENST00000424964 BCL2L12Q9HB09 334 aa19.12■□□□□ 0.65
TMEM248-204ENST00000424964 DBF4Q9UBU7 674 aaPredicted RBP19.12■□□□□ 0.65
TMEM248-204ENST00000424964 CAMTA2O94983 1202 aa19.11■□□□□ 0.65
TMEM248-204ENST00000424964 SLFN5Q08AF3 891 aa19.11■□□□□ 0.65
TMEM248-204ENST00000424964 CCDC30Q5VVM6 783 aa19.11■□□□□ 0.65
TMEM248-204ENST00000424964 KIF6Q6ZMV9 814 aa19.11■□□□□ 0.65
TMEM248-204ENST00000424964 TTLL7Q6ZT98 887 aa19.11■□□□□ 0.65
TMEM248-204ENST00000424964 CDCA7LQ96GN5 454 aa19.11■□□□□ 0.65
TMEM248-204ENST00000424964 PARP3Q9Y6F1 533 aa19.11■□□□□ 0.65
TMEM248-204ENST00000424964 AIMP1Q12904 312 aaKnown RBP19.1■□□□□ 0.65
TMEM248-204ENST00000424964 BICDL1Q6ZP65 573 aa19.1■□□□□ 0.65
TMEM248-204ENST00000424964 KLHL34Q8N239 644 aa19.1■□□□□ 0.65
TMEM248-204ENST00000424964 ZNF652Q9Y2D9 606 aa19.1■□□□□ 0.65
TMEM248-204ENST00000424964 COPS6Q7L5N1 327 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms