RNA–Protein interactions for RNA: ENST00000417403.5

ABCA13-202, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 3,528 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-202ENST00000417403 IBTKQ9P2D0 1353 aaPredicted RBP8.63□□□□□ -1.03
ABCA13-202ENST00000417403 VASPP50552 380 aaPredicted RBP8.63□□□□□ -1.03
ABCA13-202ENST00000417403 SKAP1Q86WV1 359 aa8.63□□□□□ -1.03
ABCA13-202ENST00000417403 RAPGEF4Q8WZA2 1011 aa8.63□□□□□ -1.03
ABCA13-202ENST00000417403 SPG7Q9UQ90 795 aa8.63□□□□□ -1.03
ABCA13-202ENST00000417403 KIF16BQ96L93 1317 aa8.62□□□□□ -1.03
ABCA13-202ENST00000417403 ZKSCAN2Q63HK3 967 aa8.62□□□□□ -1.03
ABCA13-202ENST00000417403 INTS3Q68E01 1043 aaKnown RBP8.62□□□□□ -1.03
ABCA13-202ENST00000417403 SPRYD3Q8NCJ5 442 aa8.62□□□□□ -1.03
ABCA13-202ENST00000417403 CNKSR2Q8WXI2 1034 aa8.62□□□□□ -1.03
ABCA13-202ENST00000417403 RTF1Q92541 710 aaKnown RBP8.62□□□□□ -1.03
ABCA13-202ENST00000417403 THRAP3Q9Y2W1 955 aaKnown RBP8.62□□□□□ -1.03
ABCA13-202ENST00000417403 NUP98P52948 1817 aa8.62□□□□□ -1.03
ABCA13-202ENST00000417403 BTBD11A6QL63 1104 aa8.62□□□□□ -1.03
ABCA13-202ENST00000417403 NEFMP07197 916 aa8.62□□□□□ -1.03
ABCA13-202ENST00000417403 SLC39A6Q13433 755 aa8.62□□□□□ -1.03
ABCA13-202ENST00000417403 ONECUT3O60422 494 aaPredicted RBP8.62□□□□□ -1.03
ABCA13-202ENST00000417403 ADAMTS2O95450 1211 aa8.62□□□□□ -1.03
ABCA13-202ENST00000417403 VPS72Q15906 364 aa8.62□□□□□ -1.03
ABCA13-202ENST00000417403 MARCH10Q8NA82 808 aaPredicted RBP8.62□□□□□ -1.03
ABCA13-202ENST00000417403 C4AP0C0L4 1744 aa8.61□□□□□ -1.03
ABCA13-202ENST00000417403 C4BP0C0L5 1744 aa8.61□□□□□ -1.03
ABCA13-202ENST00000417403 ERVV-2B6SEH9 535 aa8.61□□□□□ -1.03
ABCA13-202ENST00000417403 UNC5CLQ8IV45 518 aa8.61□□□□□ -1.03
ABCA13-202ENST00000417403 DZIP1LQ8IYY4 767 aaKnown RBP8.61□□□□□ -1.03
ABCA13-202ENST00000417403 ZNF496Q96IT1 587 aaPredicted RBP8.61□□□□□ -1.03
ABCA13-202ENST00000417403 PHAXQ9H814 394 aaKnown RBP8.61□□□□□ -1.03
ABCA13-202ENST00000417403 TNS1Q9HBL0 1735 aaKnown RBP8.61□□□□□ -1.03
ABCA13-202ENST00000417403 FRAT1Q92837 279 aaPredicted RBP8.6□□□□□ -1.03
ABCA13-202ENST00000417403 CLUAP1Q96AJ1 413 aa8.6□□□□□ -1.03
ABCA13-202ENST00000417403 CSB-PGBD3P0DP91 1061 aa8.6□□□□□ -1.03
ABCA13-202ENST00000417403 C1orf141Q5JVX7 400 aa8.6□□□□□ -1.03
ABCA13-202ENST00000417403 PTPRCP08575 1304 aa8.6□□□□□ -1.03
ABCA13-202ENST00000417403 PIGBQ92521 554 aa8.6□□□□□ -1.03
ABCA13-202ENST00000417403 SCN7AQ01118 1682 aa8.6□□□□□ -1.03
ABCA13-202ENST00000417403 LAMB2P55268 1798 aa8.59□□□□□ -1.03
ABCA13-202ENST00000417403 NEFLP07196 543 aa8.59□□□□□ -1.03
ABCA13-202ENST00000417403 CHPF2Q9P2E5 772 aa8.59□□□□□ -1.03
ABCA13-202ENST00000417403 USP16Q9Y5T5 823 aa8.59□□□□□ -1.03
ABCA13-202ENST00000417403 DDX60Q8IY21 1712 aaKnown RBP8.59□□□□□ -1.03
ABCA13-202ENST00000417403 NBPF26B4DH59 902 aa8.59□□□□□ -1.03
ABCA13-202ENST00000417403 NBPF14Q5TI25 921 aa8.59□□□□□ -1.03
ABCA13-202ENST00000417403 NBPF10Q6P3W6 841 aaKnown RBP8.59□□□□□ -1.03
ABCA13-202ENST00000417403 PTF1AQ7RTS3 328 aa8.59□□□□□ -1.03
ABCA13-202ENST00000417403 NBPF15Q8N660 670 aa8.59□□□□□ -1.03
ABCA13-202ENST00000417403 ATG3Q9NT62 314 aa8.59□□□□□ -1.03
ABCA13-202ENST00000417403 GOLGB1Q14789 3259 aaKnown RBP8.58□□□□□ -1.04
ABCA13-202ENST00000417403 FLIIQ13045 1269 aa8.58□□□□□ -1.04
ABCA13-202ENST00000417403 COL24A1Q17RW2 1714 aa8.58□□□□□ -1.04
ABCA13-202ENST00000417403 UBR3Q6ZT12 1888 aa8.58□□□□□ -1.04
ABCA13-202ENST00000417403 A0A1B0GUL6 1792 aa8.58□□□□□ -1.04
ABCA13-202ENST00000417403 RGPD3A6NKT7 1758 aaPredicted RBP8.58□□□□□ -1.04
ABCA13-202ENST00000417403 RGPD4Q7Z3J3 1758 aa8.58□□□□□ -1.04
ABCA13-202ENST00000417403 COL4A1P02462 1669 aa8.58□□□□□ -1.04
ABCA13-202ENST00000417403 NUTM2BA6NNL0 878 aaPredicted RBP8.58□□□□□ -1.04
ABCA13-202ENST00000417403 NUTM2EB1AL46 878 aaPredicted RBP8.58□□□□□ -1.04
ABCA13-202ENST00000417403 NUTM2AQ8IVF1 878 aaPredicted RBP8.58□□□□□ -1.04
ABCA13-202ENST00000417403 USP35Q9P2H5 1018 aa8.58□□□□□ -1.04
ABCA13-202ENST00000417403 CCDC9Q9Y3X0 531 aaKnown RBP8.58□□□□□ -1.04
ABCA13-202ENST00000417403 F6X3S4 739 aa8.57□□□□□ -1.04
ABCA13-202ENST00000417403 ANXA1P04083 346 aa8.57□□□□□ -1.04
ABCA13-202ENST00000417403 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.57□□□□□ -1.04
ABCA13-202ENST00000417403 ASAP1Q9ULH1 1129 aa8.57□□□□□ -1.04
ABCA13-202ENST00000417403 EVA1CP58658 441 aa8.57□□□□□ -1.04
ABCA13-202ENST00000417403 TEFQ10587 303 aa8.57□□□□□ -1.04
ABCA13-202ENST00000417403 HDAC1Q13547 482 aaPredicted RBP8.57□□□□□ -1.04
ABCA13-202ENST00000417403 HSP90AB1P08238 724 aaKnown RBP8.56□□□□□ -1.04
ABCA13-202ENST00000417403 BEND3Q5T5X7 828 aa8.56□□□□□ -1.04
ABCA13-202ENST00000417403 RGL2O15211 777 aa8.56□□□□□ -1.04
ABCA13-202ENST00000417403 C8orf37Q96NL8 207 aa8.56□□□□□ -1.04
ABCA13-202ENST00000417403 UTYO14607 1347 aa8.56□□□□□ -1.04
ABCA13-202ENST00000417403 MYH3P11055 1940 aa8.56□□□□□ -1.04
ABCA13-202ENST00000417403 ATXN8OSP0DMR3 200 aa8.55□□□□□ -1.04
ABCA13-202ENST00000417403 AAMPQ13685 434 aa8.55□□□□□ -1.04
ABCA13-202ENST00000417403 HDGFL1Q5TGJ6 251 aa8.55□□□□□ -1.04
ABCA13-202ENST00000417403 CCDC30Q5VVM6 783 aa8.55□□□□□ -1.04
ABCA13-202ENST00000417403 KAZALD1Q96I82 304 aa8.55□□□□□ -1.04
ABCA13-202ENST00000417403 RGS17Q9UGC6 210 aaPredicted RBP8.55□□□□□ -1.04
ABCA13-202ENST00000417403 DHX37Q8IY37 1157 aaKnown RBP8.55□□□□□ -1.04
ABCA13-202ENST00000417403 DDX54Q8TDD1 881 aaKnown RBP8.55□□□□□ -1.04
ABCA13-202ENST00000417403 MEIS3Q99687 375 aa8.55□□□□□ -1.04
ABCA13-202ENST00000417403 USP44Q9H0E7 712 aa8.55□□□□□ -1.04
ABCA13-202ENST00000417403 DDX19BQ9UMR2 479 aa8.55□□□□□ -1.04
ABCA13-202ENST00000417403 AFF2P51816 1311 aa8.54□□□□□ -1.04
ABCA13-202ENST00000417403 IGKV5-2P06315 115 aa8.54□□□□□ -1.04
ABCA13-202ENST00000417403 SMC5Q8IY18 1101 aa8.54□□□□□ -1.04
ABCA13-202ENST00000417403 CDCA7Q9BWT1 371 aaPredicted RBP8.54□□□□□ -1.04
ABCA13-202ENST00000417403 DDX21Q9NR30 783 aaKnown RBP eCLIP8.54□□□□□ -1.04
ABCA13-202ENST00000417403 KCNQ2O43526 872 aa8.54□□□□□ -1.04
ABCA13-202ENST00000417403 ATF5Q9Y2D1 282 aaPredicted RBP8.54□□□□□ -1.04
ABCA13-202ENST00000417403 LRP5O75197 1615 aa8.54□□□□□ -1.04
ABCA13-202ENST00000417403 CABP4P57796 275 aa8.54□□□□□ -1.04
ABCA13-202ENST00000417403 CCDC136Q96JN2 1154 aa8.54□□□□□ -1.04
ABCA13-202ENST00000417403 IPO8O15397 1037 aaKnown RBP8.53□□□□□ -1.04
ABCA13-202ENST00000417403 PDE4AP27815 886 aa8.53□□□□□ -1.04
ABCA13-202ENST00000417403 CASP7P55210 303 aa8.53□□□□□ -1.04
ABCA13-202ENST00000417403 FAM98CQ17RN3 349 aaKnown RBP8.53□□□□□ -1.04
ABCA13-202ENST00000417403 CENPQQ7L2Z9 268 aaPredicted RBP8.53□□□□□ -1.04
ABCA13-202ENST00000417403 GJD4Q96KN9 370 aaPredicted RBP8.53□□□□□ -1.04
ABCA13-202ENST00000417403 API5Q9BZZ5 524 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 244.1 ms