RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 PLEKHO1Q53GL0 409 aaPredicted RBP9.52□□□□□ -0.89
COPS3-202ENST00000417352 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.52□□□□□ -0.89
COPS3-202ENST00000417352 CLSPNQ9HAW4 1339 aa9.52□□□□□ -0.89
COPS3-202ENST00000417352 YBX3P16989 372 aaKnown RBP eCLIP9.51□□□□□ -0.896e-7■■■■□ 21
COPS3-202ENST00000417352 MKRN3Q13064 507 aaKnown RBP9.51□□□□□ -0.89
COPS3-202ENST00000417352 C1orf141Q5JVX7 400 aa9.51□□□□□ -0.89
COPS3-202ENST00000417352 ZNF530Q6P9A1 599 aaPredicted RBP9.51□□□□□ -0.89
COPS3-202ENST00000417352 CDAN1Q8IWY9 1227 aa9.51□□□□□ -0.89
COPS3-202ENST00000417352 LINC00116Q8NCU8 138 aa9.51□□□□□ -0.89
COPS3-202ENST00000417352 ZNF526Q8TF50 670 aaPredicted RBP9.51□□□□□ -0.89
COPS3-202ENST00000417352 TAF1LQ8IZX4 1826 aa9.51□□□□□ -0.89
COPS3-202ENST00000417352 MAP3K5Q99683 1374 aa9.5□□□□□ -0.89
COPS3-202ENST00000417352 GIGYF1O75420 1035 aaPredicted RBP9.5□□□□□ -0.89
COPS3-202ENST00000417352 PSEN1P49768 467 aa9.5□□□□□ -0.89
COPS3-202ENST00000417352 MTHFSP49914 203 aa9.5□□□□□ -0.89
COPS3-202ENST00000417352 NKX1-1Q15270 411 aaPredicted RBP9.5□□□□□ -0.89
COPS3-202ENST00000417352 TRAPPC3LQ5T215 181 aa9.5□□□□□ -0.89
COPS3-202ENST00000417352 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.5□□□□□ -0.89
COPS3-202ENST00000417352 C4BP0C0L5 1744 aa9.5□□□□□ -0.89
COPS3-202ENST00000417352 TOGARAM1Q9Y4F4 1720 aa9.5□□□□□ -0.89
COPS3-202ENST00000417352 PKD1L3Q7Z443 1732 aa9.49□□□□□ -0.89
COPS3-202ENST00000417352 PTCD1O75127 700 aaKnown RBP9.49□□□□□ -0.89
COPS3-202ENST00000417352 HSP90AB1P08238 724 aaKnown RBP9.49□□□□□ -0.89
COPS3-202ENST00000417352 C1QTNF8P60827 252 aa9.49□□□□□ -0.89
COPS3-202ENST00000417352 ITPK1Q13572 414 aa9.49□□□□□ -0.89
COPS3-202ENST00000417352 AMIGO3Q86WK7 504 aa9.49□□□□□ -0.89
COPS3-202ENST00000417352 PDCD7Q8N8D1 485 aaKnown RBP9.49□□□□□ -0.89
COPS3-202ENST00000417352 ATG3Q9NT62 314 aa9.49□□□□□ -0.89
COPS3-202ENST00000417352 RTCBQ9Y3I0 505 aaKnown RBP9.49□□□□□ -0.89
COPS3-202ENST00000417352 CD2APQ9Y5K6 639 aa9.49□□□□□ -0.89
COPS3-202ENST00000417352 SSFA2P28290 1259 aa9.48□□□□□ -0.89
COPS3-202ENST00000417352 RFC4P35249 363 aa9.48□□□□□ -0.89
COPS3-202ENST00000417352 SULT6B1Q6IMI4 303 aa9.48□□□□□ -0.89
COPS3-202ENST00000417352 IFNLR1Q8IU57 520 aaPredicted RBP9.48□□□□□ -0.89
COPS3-202ENST00000417352 AEBP1Q8IUX7 1158 aa9.48□□□□□ -0.89
COPS3-202ENST00000417352 SPOCK2Q92563 424 aa9.48□□□□□ -0.89
COPS3-202ENST00000417352 DCAF5Q96JK2 942 aa9.48□□□□□ -0.89
COPS3-202ENST00000417352 ANKRD26Q9UPS8 1709 aa9.48□□□□□ -0.89
COPS3-202ENST00000417352 ERVV-2B6SEH9 535 aa9.47□□□□□ -0.89
COPS3-202ENST00000417352 MMP10P09238 476 aa9.47□□□□□ -0.89
COPS3-202ENST00000417352 AMOTQ4VCS5 1084 aa9.47□□□□□ -0.89
COPS3-202ENST00000417352 CC2D1BQ5T0F9 858 aaKnown RBP9.47□□□□□ -0.89
COPS3-202ENST00000417352 NFATC2IPQ8NCF5 419 aa9.47□□□□□ -0.89
COPS3-202ENST00000417352 IGSF1Q8N6C5 1336 aa9.47□□□□□ -0.89
COPS3-202ENST00000417352 UTRNP46939 3433 aa9.46□□□□□ -0.89
COPS3-202ENST00000417352 SNPHO15079 494 aa9.46□□□□□ -0.9
COPS3-202ENST00000417352 HMOX1P09601 288 aa9.46□□□□□ -0.9
COPS3-202ENST00000417352 GPBP1L1Q9HC44 474 aaPredicted RBP9.46□□□□□ -0.9
COPS3-202ENST00000417352 CIZ1Q9ULV3 898 aaPredicted RBP9.46□□□□□ -0.9
COPS3-202ENST00000417352 UBR3Q6ZT12 1888 aa9.46□□□□□ -0.9
COPS3-202ENST00000417352 NLGN1Q8N2Q7 840 aa9.45□□□□□ -0.9
COPS3-202ENST00000417352 ARHGEF1Q92888 912 aaKnown RBP9.45□□□□□ -0.9
COPS3-202ENST00000417352 L3MBTL3Q96JM7 780 aaPredicted RBP9.45□□□□□ -0.9
COPS3-202ENST00000417352 PARP3Q9Y6F1 533 aa9.45□□□□□ -0.9
COPS3-202ENST00000417352 COL24A1Q17RW2 1714 aa9.45□□□□□ -0.9
COPS3-202ENST00000417352 A0A0G2JLW4 131 aa9.44□□□□□ -0.9
COPS3-202ENST00000417352 PDAP1Q13442 181 aaKnown RBP9.44□□□□□ -0.9
COPS3-202ENST00000417352 ARHGAP27Q6ZUM4 889 aa9.44□□□□□ -0.9
COPS3-202ENST00000417352 C3orf67Q6ZVT6 689 aa9.44□□□□□ -0.9
COPS3-202ENST00000417352 BCS1LQ9Y276 419 aa9.44□□□□□ -0.9
COPS3-202ENST00000417352 GOLGB1Q14789 3259 aaKnown RBP9.44□□□□□ -0.9
COPS3-202ENST00000417352 U2SURPO15042 1029 aaKnown RBP9.43□□□□□ -0.9
COPS3-202ENST00000417352 CCDC87Q9NVE4 849 aa9.43□□□□□ -0.9
COPS3-202ENST00000417352 NCAPD2Q15021 1401 aa9.42□□□□□ -0.9
COPS3-202ENST00000417352 ATP10DQ9P241 1426 aa9.42□□□□□ -0.9
COPS3-202ENST00000417352 ZPR1O75312 459 aa9.42□□□□□ -0.9
COPS3-202ENST00000417352 RPS6KA4O75676 772 aa9.42□□□□□ -0.9
COPS3-202ENST00000417352 IL13P35225 146 aa9.42□□□□□ -0.9
COPS3-202ENST00000417352 CRKLP46109 303 aaKnown RBP9.42□□□□□ -0.9
COPS3-202ENST00000417352 SLC4A9Q96Q91 983 aa9.42□□□□□ -0.9
COPS3-202ENST00000417352 TMEM121BQ9BXQ6 578 aaPredicted RBP9.42□□□□□ -0.9
COPS3-202ENST00000417352 LGR6Q9HBX8 967 aa9.42□□□□□ -0.9
COPS3-202ENST00000417352 KIF7Q2M1P5 1343 aa9.41□□□□□ -0.9
COPS3-202ENST00000417352 DIAPH1O60610 1272 aaKnown RBP9.41□□□□□ -0.9
COPS3-202ENST00000417352 FCHSD2O94868 740 aa9.41□□□□□ -0.9
COPS3-202ENST00000417352 SLC39A6Q13433 755 aa9.41□□□□□ -0.9
COPS3-202ENST00000417352 AKAP4Q5JQC9 854 aa9.41□□□□□ -0.9
COPS3-202ENST00000417352 RC3H1Q5TC82 1133 aaKnown RBP9.41□□□□□ -0.9
COPS3-202ENST00000417352 SRP68Q9UHB9 627 aaKnown RBP9.41□□□□□ -0.9
COPS3-202ENST00000417352 ZNF330Q9Y3S2 320 aaPredicted RBP9.41□□□□□ -0.9
COPS3-202ENST00000417352 N4BP2Q86UW6 1770 aaPredicted RBP9.41□□□□□ -0.9
COPS3-202ENST00000417352 KDM6AO15550 1401 aaPredicted RBP9.4□□□□□ -0.9
COPS3-202ENST00000417352 GYS1P13807 737 aa9.4□□□□□ -0.9
COPS3-202ENST00000417352 DPEP1P16444 411 aa9.4□□□□□ -0.9
COPS3-202ENST00000417352 TGFB2P61812 414 aa9.4□□□□□ -0.9
COPS3-202ENST00000417352 CICQ96RK0 1608 aaPredicted RBP9.4□□□□□ -0.9
COPS3-202ENST00000417352 CNTNAP4Q9C0A0 1308 aa9.39□□□□□ -0.91
COPS3-202ENST00000417352 AMER1Q5JTC6 1135 aaPredicted RBP9.39□□□□□ -0.91
COPS3-202ENST00000417352 NPM2Q86SE8 214 aaKnown RBP9.39□□□□□ -0.91
COPS3-202ENST00000417352 DNAJC10Q8IXB1 793 aa9.39□□□□□ -0.91
COPS3-202ENST00000417352 TTC5Q8N0Z6 440 aa9.39□□□□□ -0.91
COPS3-202ENST00000417352 SLC52A2Q9HAB3 445 aa9.39□□□□□ -0.91
COPS3-202ENST00000417352 NPHP1O15259 732 aa9.38□□□□□ -0.91
COPS3-202ENST00000417352 RNMTO43148 476 aaKnown RBP9.38□□□□□ -0.91
COPS3-202ENST00000417352 CANXP27824 592 aaKnown RBP9.38□□□□□ -0.91
COPS3-202ENST00000417352 MTHFSDQ2M296 383 aaKnown RBP9.38□□□□□ -0.91
COPS3-202ENST00000417352 USPL1Q5W0Q7 1092 aa9.38□□□□□ -0.91
COPS3-202ENST00000417352 BICDL1Q6ZP65 573 aa9.38□□□□□ -0.91
COPS3-202ENST00000417352 PIM2Q9P1W9 311 aa9.38□□□□□ -0.91
COPS3-202ENST00000417352 KDRP35968 1356 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms