RNA–Protein interactions for RNA: ENST00000417300.1

GABRE-202, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-202ENST00000417300 QSER1Q2KHR3 1735 aa15.31■□□□□ 0.04
GABRE-202ENST00000417300 SIPA1L3O60292 1781 aaPredicted RBP15.31■□□□□ 0.04
GABRE-202ENST00000417300 SLC27A3Q5K4L6 730 aa15.31■□□□□ 0.04
GABRE-202ENST00000417300 ZNF428Q96B54 188 aa15.31■□□□□ 0.04
GABRE-202ENST00000417300 RARSP54136 660 aaKnown RBP15.3■□□□□ 0.04
GABRE-202ENST00000417300 MSL1Q68DK7 614 aa15.3■□□□□ 0.04
GABRE-202ENST00000417300 KDM3BQ7LBC6 1761 aa15.3■□□□□ 0.04
GABRE-202ENST00000417300 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.3■□□□□ 0.04
GABRE-202ENST00000417300 IL2RBP14784 551 aa15.29■□□□□ 0.04
GABRE-202ENST00000417300 MLLT1Q03111 559 aaPredicted RBP15.29■□□□□ 0.04
GABRE-202ENST00000417300 NHSQ6T4R5 1651 aa15.28■□□□□ 0.04
GABRE-202ENST00000417300 MRC1P22897 1456 aa15.28■□□□□ 0.04
GABRE-202ENST00000417300 RNMTO43148 476 aaKnown RBP15.28■□□□□ 0.04
GABRE-202ENST00000417300 PHKG2P15735 406 aa15.28■□□□□ 0.04
GABRE-202ENST00000417300 IFNL2Q8IZJ0 200 aa15.28■□□□□ 0.04
GABRE-202ENST00000417300 KDM6AO15550 1401 aaPredicted RBP15.27■□□□□ 0.04
GABRE-202ENST00000417300 IRX6P78412 446 aaPredicted RBP15.27■□□□□ 0.04
GABRE-202ENST00000417300 TAF7Q15545 349 aaPredicted RBP15.27■□□□□ 0.04
GABRE-202ENST00000417300 TSPYL4Q9UJ04 414 aa15.27■□□□□ 0.04
GABRE-202ENST00000417300 PCDH11XQ9BZA7 1347 aa15.26■□□□□ 0.03
GABRE-202ENST00000417300 PCDH11YQ9BZA8 1340 aa15.26■□□□□ 0.03
GABRE-202ENST00000417300 CYP27B1O15528 508 aa15.26■□□□□ 0.03
GABRE-202ENST00000417300 VAMP4O75379 141 aa15.26■□□□□ 0.03
GABRE-202ENST00000417300 BCAR3O75815 825 aa15.26■□□□□ 0.03
GABRE-202ENST00000417300 HSP90AB1P08238 724 aaKnown RBP15.26■□□□□ 0.03
GABRE-202ENST00000417300 ALDH1L2Q3SY69 923 aa15.26■□□□□ 0.03
GABRE-202ENST00000417300 LGR6Q9HBX8 967 aa15.26■□□□□ 0.03
GABRE-202ENST00000417300 TEFQ10587 303 aa15.25■□□□□ 0.03
GABRE-202ENST00000417300 TWISTNBQ3B726 338 aaPredicted RBP15.25■□□□□ 0.03
GABRE-202ENST00000417300 MPRIPQ6WCQ1 1025 aa15.25■□□□□ 0.03
GABRE-202ENST00000417300 COL23A1Q86Y22 540 aaPredicted RBP15.25■□□□□ 0.03
GABRE-202ENST00000417300 ZCRB1Q8TBF4 217 aaKnown RBP15.25■□□□□ 0.03
GABRE-202ENST00000417300 SOS1Q07889 1333 aaPredicted RBP15.24■□□□□ 0.03
GABRE-202ENST00000417300 BRPF1P55201 1214 aaPredicted RBP15.24■□□□□ 0.03
GABRE-202ENST00000417300 KCNQ4P56696 695 aa15.24■□□□□ 0.03
GABRE-202ENST00000417300 TSPYL6Q8N831 410 aa15.24■□□□□ 0.03
GABRE-202ENST00000417300 C8orf58Q8NAV2 365 aa15.24■□□□□ 0.03
GABRE-202ENST00000417300 DCAF5Q96JK2 942 aa15.24■□□□□ 0.03
GABRE-202ENST00000417300 PRDM10Q9NQV6 1147 aa15.24■□□□□ 0.03
GABRE-202ENST00000417300 BTAF1O14981 1849 aa15.23■□□□□ 0.03
GABRE-202ENST00000417300 PLIN1O60240 522 aa15.23■□□□□ 0.03
GABRE-202ENST00000417300 SMC1BQ8NDV3 1235 aa15.23■□□□□ 0.03
GABRE-202ENST00000417300 SSH1Q8WYL5 1049 aa15.23■□□□□ 0.03
GABRE-202ENST00000417300 KAT6BQ8WYB5 2073 aa15.23■□□□□ 0.03
GABRE-202ENST00000417300 NKX1-1Q15270 411 aaPredicted RBP15.22■□□□□ 0.03
GABRE-202ENST00000417300 SMC4Q9NTJ3 1288 aa15.22■□□□□ 0.03
GABRE-202ENST00000417300 MIS18AQ9NYP9 233 aa15.22■□□□□ 0.03
GABRE-202ENST00000417300 TUBGCP6Q96RT7 1819 aa15.22■□□□□ 0.03
GABRE-202ENST00000417300 KIF16BQ96L93 1317 aa15.21■□□□□ 0.03
GABRE-202ENST00000417300 PDE3AQ14432 1141 aa15.21■□□□□ 0.03
GABRE-202ENST00000417300 BCL2L13Q9BXK5 485 aa15.21■□□□□ 0.03
GABRE-202ENST00000417300 SLC52A2Q9HAB3 445 aa15.21■□□□□ 0.03
GABRE-202ENST00000417300 ABHD8Q96I13 439 aa15.2■□□□□ 0.02
GABRE-202ENST00000417300 TOGARAM1Q9Y4F4 1720 aa15.2■□□□□ 0.02
GABRE-202ENST00000417300 CACNA1FO60840 1977 aa15.19■□□□□ 0.02
GABRE-202ENST00000417300 BTBD11A6QL63 1104 aa15.19■□□□□ 0.02
GABRE-202ENST00000417300 ELL2O00472 640 aaPredicted RBP15.19■□□□□ 0.02
GABRE-202ENST00000417300 HOXB7P09629 217 aa15.19■□□□□ 0.02
GABRE-202ENST00000417300 CANXP27824 592 aaKnown RBP15.19■□□□□ 0.02
GABRE-202ENST00000417300 KRT24Q2M2I5 525 aa15.19■□□□□ 0.02
GABRE-202ENST00000417300 ZKSCAN2Q63HK3 967 aa15.19■□□□□ 0.02
GABRE-202ENST00000417300 MRPL50Q8N5N7 158 aaKnown RBP15.19■□□□□ 0.02
GABRE-202ENST00000417300 RRAGCQ9HB90 399 aa15.19■□□□□ 0.02
GABRE-202ENST00000417300 PPP4R2Q9NY27 417 aa15.19■□□□□ 0.02
GABRE-202ENST00000417300 KDM2BQ8NHM5 1336 aa15.18■□□□□ 0.02
GABRE-202ENST00000417300 FOXN1O15353 648 aa15.18■□□□□ 0.02
GABRE-202ENST00000417300 EIF4A1P60842 406 aaKnown RBP15.18■□□□□ 0.02
GABRE-202ENST00000417300 C20orf194Q5TEA3 1177 aa15.18■□□□□ 0.02
GABRE-202ENST00000417300 ARHGAP27Q6ZUM4 889 aa15.18■□□□□ 0.02
GABRE-202ENST00000417300 HEG1Q9ULI3 1381 aa15.17■□□□□ 0.02
GABRE-202ENST00000417300 MS4A1P11836 297 aa15.17■□□□□ 0.02
GABRE-202ENST00000417300 EXOC6Q8TAG9 804 aa15.17■□□□□ 0.02
GABRE-202ENST00000417300 FRAT1Q92837 279 aaPredicted RBP15.17■□□□□ 0.02
GABRE-202ENST00000417300 CRBNQ96SW2 442 aa15.17■□□□□ 0.02
GABRE-202ENST00000417300 CICQ96RK0 1608 aaPredicted RBP15.17■□□□□ 0.02
GABRE-202ENST00000417300 ERVV-2B6SEH9 535 aa15.16■□□□□ 0.02
GABRE-202ENST00000417300 IPO8O15397 1037 aaKnown RBP15.16■□□□□ 0.02
GABRE-202ENST00000417300 RGS19P49795 217 aa15.16■□□□□ 0.02
GABRE-202ENST00000417300 ARHGAP45Q92619 1136 aa15.16■□□□□ 0.02
GABRE-202ENST00000417300 UBR2Q8IWV8 1755 aa15.16■□□□□ 0.02
GABRE-202ENST00000417300 CTCFP49711 727 aaPredicted RBP15.15■□□□□ 0.02
GABRE-202ENST00000417300 ATF7IPQ6VMQ6 1270 aa15.15■□□□□ 0.02
GABRE-202ENST00000417300 AIDAQ96BJ3 306 aa15.15■□□□□ 0.02
GABRE-202ENST00000417300 CHMP4AQ9BY43 222 aa15.15■□□□□ 0.02
GABRE-202ENST00000417300 NOB1Q9ULX3 412 aaKnown RBP15.15■□□□□ 0.02
GABRE-202ENST00000417300 CCDC85CA6NKD9 419 aa15.14■□□□□ 0.01
GABRE-202ENST00000417300 KCNQ3O43525 872 aa15.14■□□□□ 0.01
GABRE-202ENST00000417300 TRIM27P14373 513 aa15.14■□□□□ 0.01
GABRE-202ENST00000417300 CABP4P57796 275 aa15.14■□□□□ 0.01
GABRE-202ENST00000417300 C9orf131Q5VYM1 1079 aa15.14■□□□□ 0.01
GABRE-202ENST00000417300 ZNF790Q6PG37 636 aa15.14■□□□□ 0.01
GABRE-202ENST00000417300 NFATC2IPQ8NCF5 419 aa15.14■□□□□ 0.01
GABRE-202ENST00000417300 DDX54Q8TDD1 881 aaKnown RBP15.14■□□□□ 0.01
GABRE-202ENST00000417300 CCNL1Q9UK58 526 aaPredicted RBP15.14■□□□□ 0.01
GABRE-202ENST00000417300 BCS1LQ9Y276 419 aa15.14■□□□□ 0.01
GABRE-202ENST00000417300 ITGB4P16144 1822 aa15.13■□□□□ 0.01
GABRE-202ENST00000417300 CCDC30Q5VVM6 783 aa15.13■□□□□ 0.01
GABRE-202ENST00000417300 C10orf71Q711Q0 1435 aa15.13■□□□□ 0.01
GABRE-202ENST00000417300 DZIP1LQ8IYY4 767 aaKnown RBP15.13■□□□□ 0.01
GABRE-202ENST00000417300 FLAD1Q8NFF5 587 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms