RNA–Protein interactions for RNA: ENST00000413358.6

HCG18-234, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 916 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-234ENST00000413358 ZNF790Q6PG37 636 aa11.54□□□□□ -0.56
HCG18-234ENST00000413358 PIGBQ92521 554 aa11.54□□□□□ -0.56
HCG18-234ENST00000413358 SMARCC1Q92922 1105 aaPredicted RBP11.54□□□□□ -0.56
HCG18-234ENST00000413358 COL23A1Q86Y22 540 aaPredicted RBP11.53□□□□□ -0.56
HCG18-234ENST00000413358 NLGN2Q8NFZ4 835 aa11.53□□□□□ -0.56
HCG18-234ENST00000413358 FMNL2Q96PY5 1086 aa11.53□□□□□ -0.56
HCG18-234ENST00000413358 KCPQ6ZWJ8 1503 aa11.53□□□□□ -0.56
HCG18-234ENST00000413358 UBR2Q8IWV8 1755 aa11.53□□□□□ -0.56
HCG18-234ENST00000413358 KCNQ3O43525 872 aa11.52□□□□□ -0.57
HCG18-234ENST00000413358 CT47B1P0C2W7 299 aaPredicted RBP11.52□□□□□ -0.57
HCG18-234ENST00000413358 EIF4A1P60842 406 aaKnown RBP11.52□□□□□ -0.57
HCG18-234ENST00000413358 TWISTNBQ3B726 338 aaPredicted RBP11.52□□□□□ -0.57
HCG18-234ENST00000413358 MSL1Q68DK7 614 aa11.52□□□□□ -0.57
HCG18-234ENST00000413358 AK7Q96M32 723 aa11.52□□□□□ -0.57
HCG18-234ENST00000413358 PALLDQ8WX93 1383 aa11.52□□□□□ -0.57
HCG18-234ENST00000413358 QSER1Q2KHR3 1735 aa11.52□□□□□ -0.57
HCG18-234ENST00000413358 ELL2O00472 640 aaPredicted RBP11.51□□□□□ -0.57
HCG18-234ENST00000413358 PTCD1O75127 700 aaKnown RBP11.51□□□□□ -0.57
HCG18-234ENST00000413358 KRT24Q2M2I5 525 aa11.51□□□□□ -0.57
HCG18-234ENST00000413358 ASAP1Q9ULH1 1129 aa11.51□□□□□ -0.57
HCG18-234ENST00000413358 CD2APQ9Y5K6 639 aa11.51□□□□□ -0.57
HCG18-234ENST00000413358 SOS1Q07889 1333 aaPredicted RBP11.51□□□□□ -0.57
HCG18-234ENST00000413358 LAMB4A4D0S4 1761 aa11.51□□□□□ -0.57
HCG18-234ENST00000413358 C5P01031 1676 aa11.5□□□□□ -0.57
HCG18-234ENST00000413358 HOXB7P09629 217 aa11.5□□□□□ -0.57
HCG18-234ENST00000413358 TSPYL6Q8N831 410 aa11.5□□□□□ -0.57
HCG18-234ENST00000413358 C8orf58Q8NAV2 365 aa11.5□□□□□ -0.57
HCG18-234ENST00000413358 ZNF496Q96IT1 587 aaPredicted RBP11.5□□□□□ -0.57
HCG18-234ENST00000413358 RBM42Q9BTD8 480 aaKnown RBP11.5□□□□□ -0.57
HCG18-234ENST00000413358 ATG3Q9NT62 314 aa11.5□□□□□ -0.57
HCG18-234ENST00000413358 RCAN3Q9UKA8 241 aa11.5□□□□□ -0.57
HCG18-234ENST00000413358 HEG1Q9ULI3 1381 aa11.5□□□□□ -0.57
HCG18-234ENST00000413358 HDGFL1Q5TGJ6 251 aa11.49□□□□□ -0.57
HCG18-234ENST00000413358 ZNF428Q96B54 188 aa11.49□□□□□ -0.57
HCG18-234ENST00000413358 CHMP4AQ9BY43 222 aa11.49□□□□□ -0.57
HCG18-234ENST00000413358 PHF14O94880 888 aa11.48□□□□□ -0.57
HCG18-234ENST00000413358 SNRPA1P09661 255 aaKnown RBP11.48□□□□□ -0.57
HCG18-234ENST00000413358 STK31Q9BXU1 1019 aa11.48□□□□□ -0.57
HCG18-234ENST00000413358 GPBP1L1Q9HC44 474 aaPredicted RBP11.48□□□□□ -0.57
HCG18-234ENST00000413358 SMC4Q9NTJ3 1288 aa11.48□□□□□ -0.57
HCG18-234ENST00000413358 LY75O60449 1722 aa11.48□□□□□ -0.57
HCG18-234ENST00000413358 YBX3P16989 372 aaKnown RBP eCLIP11.47□□□□□ -0.57
HCG18-234ENST00000413358 EIF2S2P20042 333 aaKnown RBP11.47□□□□□ -0.57
HCG18-234ENST00000413358 CANXP27824 592 aaKnown RBP11.47□□□□□ -0.57
HCG18-234ENST00000413358 CCDC30Q5VVM6 783 aa11.47□□□□□ -0.57
HCG18-234ENST00000413358 NECTIN2Q92692 538 aa11.47□□□□□ -0.57
HCG18-234ENST00000413358 BCL2L13Q9BXK5 485 aa11.47□□□□□ -0.57
HCG18-234ENST00000413358 KIF16BQ96L93 1317 aa11.46□□□□□ -0.57
HCG18-234ENST00000413358 LOC102724428A0A0B4J2F2 783 aa11.46□□□□□ -0.57
HCG18-234ENST00000413358 VAMP4O75379 141 aa11.46□□□□□ -0.57
HCG18-234ENST00000413358 RARSP54136 660 aaKnown RBP11.46□□□□□ -0.57
HCG18-234ENST00000413358 SIK1P57059 783 aa11.46□□□□□ -0.57
HCG18-234ENST00000413358 ALDH1L2Q3SY69 923 aa11.46□□□□□ -0.57
HCG18-234ENST00000413358 VSIG10Q8N0Z9 540 aa11.46□□□□□ -0.57
HCG18-234ENST00000413358 TJP1Q07157 1748 aa11.46□□□□□ -0.58
HCG18-234ENST00000413358 CICQ96RK0 1608 aaPredicted RBP11.46□□□□□ -0.58
HCG18-234ENST00000413358 PRAMEF22A3QJZ6 481 aa11.45□□□□□ -0.58
HCG18-234ENST00000413358 TCERG1O14776 1098 aaKnown RBP11.45□□□□□ -0.58
HCG18-234ENST00000413358 SSFA2P28290 1259 aa11.45□□□□□ -0.58
HCG18-234ENST00000413358 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.45□□□□□ -0.58
HCG18-234ENST00000413358 SSH1Q8WYL5 1049 aa11.45□□□□□ -0.58
HCG18-234ENST00000413358 TEX13AQ9BXU3 409 aaPredicted RBP11.45□□□□□ -0.58
HCG18-234ENST00000413358 COL24A1Q17RW2 1714 aa11.44□□□□□ -0.58
HCG18-234ENST00000413358 ZNF831Q5JPB2 1677 aa11.44□□□□□ -0.58
HCG18-234ENST00000413358 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.44□□□□□ -0.58
HCG18-234ENST00000413358 STARD3NLO95772 234 aa11.44□□□□□ -0.58
HCG18-234ENST00000413358 ATP6V1AP38606 617 aa11.44□□□□□ -0.58
HCG18-234ENST00000413358 DNAJC10Q8IXB1 793 aa11.44□□□□□ -0.58
HCG18-234ENST00000413358 TUBGCP6Q96RT7 1819 aa11.44□□□□□ -0.58
HCG18-234ENST00000413358 ERBB4Q15303 1308 aa11.43□□□□□ -0.58
HCG18-234ENST00000413358 BCAR3O75815 825 aa11.43□□□□□ -0.58
HCG18-234ENST00000413358 FRAT1Q92837 279 aaPredicted RBP11.43□□□□□ -0.58
HCG18-234ENST00000413358 CHPF2Q9P2E5 772 aa11.43□□□□□ -0.58
HCG18-234ENST00000413358 DBF4Q9UBU7 674 aaPredicted RBP11.43□□□□□ -0.58
HCG18-234ENST00000413358 ATP10DQ9P241 1426 aa11.43□□□□□ -0.58
HCG18-234ENST00000413358 GNPATO15228 680 aa11.42□□□□□ -0.58
HCG18-234ENST00000413358 RRP1P56182 461 aaKnown RBP11.42□□□□□ -0.58
HCG18-234ENST00000413358 ZNF526Q8TF50 670 aaPredicted RBP11.42□□□□□ -0.58
HCG18-234ENST00000413358 SLC4A9Q96Q91 983 aa11.42□□□□□ -0.58
HCG18-234ENST00000413358 SUPT16HQ9Y5B9 1047 aaKnown RBP11.42□□□□□ -0.58
HCG18-234ENST00000413358 USP16Q9Y5T5 823 aa11.42□□□□□ -0.58
HCG18-234ENST00000413358 COL5A3P25940 1745 aaPredicted RBP11.42□□□□□ -0.58
HCG18-234ENST00000413358 SLC4A2P04920 1241 aa11.41□□□□□ -0.58
HCG18-234ENST00000413358 MYL6BP14649 208 aa11.41□□□□□ -0.58
HCG18-234ENST00000413358 ITPK1Q13572 414 aa11.41□□□□□ -0.58
HCG18-234ENST00000413358 TRAPPC3LQ5T215 181 aa11.41□□□□□ -0.58
HCG18-234ENST00000413358 NPM2Q86SE8 214 aaKnown RBP11.41□□□□□ -0.58
HCG18-234ENST00000413358 MRPL50Q8N5N7 158 aaKnown RBP11.41□□□□□ -0.58
HCG18-234ENST00000413358 DDX21Q9NR30 783 aaKnown RBP eCLIP11.41□□□□□ -0.58
HCG18-234ENST00000413358 WWC3Q9ULE0 1092 aa11.41□□□□□ -0.58
HCG18-234ENST00000413358 RTCBQ9Y3I0 505 aaKnown RBP11.41□□□□□ -0.58
HCG18-234ENST00000413358 ZNF330Q9Y3S2 320 aaPredicted RBP11.41□□□□□ -0.58
HCG18-234ENST00000413358 C4BP0C0L5 1744 aa11.4□□□□□ -0.58
HCG18-234ENST00000413358 IPO8O15397 1037 aaKnown RBP11.4□□□□□ -0.58
HCG18-234ENST00000413358 ANXA1P04083 346 aa11.4□□□□□ -0.58
HCG18-234ENST00000413358 NEFLP07196 543 aa11.4□□□□□ -0.58
HCG18-234ENST00000413358 CYP19A1P11511 503 aaPredicted RBP11.4□□□□□ -0.58
HCG18-234ENST00000413358 CRKLP46109 303 aaKnown RBP11.4□□□□□ -0.58
HCG18-234ENST00000413358 PIP4K2AP48426 406 aaPredicted RBP11.4□□□□□ -0.58
HCG18-234ENST00000413358 LINC00116Q8NCU8 138 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms