RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 HYPKQ9NX55 129 aa25.88■■□□□ 1.73
PTPA-208ENST00000411917 USP16Q9Y5T5 823 aa25.88■■□□□ 1.73
PTPA-208ENST00000411917 EP400Q96L91 3159 aa25.87■■□□□ 1.73
PTPA-208ENST00000411917 TRIM37O94972 964 aa25.87■■□□□ 1.73
PTPA-208ENST00000411917 KAT6BQ8WYB5 2073 aa25.87■■□□□ 1.73
PTPA-208ENST00000411917 PRAMEF22A3QJZ6 481 aa25.86■■□□□ 1.73
PTPA-208ENST00000411917 SLC4A2P04920 1241 aa25.86■■□□□ 1.73
PTPA-208ENST00000411917 CYP19A1P11511 503 aaPredicted RBP25.86■■□□□ 1.73
PTPA-208ENST00000411917 MS4A1P11836 297 aa25.86■■□□□ 1.73
PTPA-208ENST00000411917 SUPT16HQ9Y5B9 1047 aaKnown RBP25.86■■□□□ 1.73
PTPA-208ENST00000411917 RREB1Q92766 1687 aa25.86■■□□□ 1.73
PTPA-208ENST00000411917 TNS1Q9HBL0 1735 aaKnown RBP25.85■■□□□ 1.73
PTPA-208ENST00000411917 PDIA6Q15084 440 aa25.85■■□□□ 1.73
PTPA-208ENST00000411917 DNAJC10Q8IXB1 793 aa25.85■■□□□ 1.73
PTPA-208ENST00000411917 EIF2S2P20042 333 aaKnown RBP25.84■■□□□ 1.73
PTPA-208ENST00000411917 ATP6V1AP38606 617 aa25.84■■□□□ 1.73
PTPA-208ENST00000411917 PDE3AQ14432 1141 aa25.84■■□□□ 1.73
PTPA-208ENST00000411917 LRP10Q7Z4F1 713 aa25.84■■□□□ 1.73
PTPA-208ENST00000411917 CCDC125Q86Z20 511 aa25.84■■□□□ 1.73
PTPA-208ENST00000411917 CHPF2Q9P2E5 772 aa25.84■■□□□ 1.73
PTPA-208ENST00000411917 COL5A3P25940 1745 aaPredicted RBP25.83■■□□□ 1.73
PTPA-208ENST00000411917 RC3H1Q5TC82 1133 aaKnown RBP25.83■■□□□ 1.73
PTPA-208ENST00000411917 ZKSCAN2Q63HK3 967 aa25.83■■□□□ 1.73
PTPA-208ENST00000411917 CNTNAP4Q9C0A0 1308 aa25.83■■□□□ 1.73
PTPA-208ENST00000411917 API5Q9BZZ5 524 aaKnown RBP25.82■■□□□ 1.72
PTPA-208ENST00000411917 ATF7IPQ6VMQ6 1270 aa25.81■■□□□ 1.72
PTPA-208ENST00000411917 BCL2L13Q9BXK5 485 aa25.81■■□□□ 1.72
PTPA-208ENST00000411917 CCNL1Q9UK58 526 aaPredicted RBP25.81■■□□□ 1.72
PTPA-208ENST00000411917 FLIIQ13045 1269 aa25.8■■□□□ 1.72
PTPA-208ENST00000411917 ITPK1Q13572 414 aa25.8■■□□□ 1.72
PTPA-208ENST00000411917 NOB1Q9ULX3 412 aaKnown RBP25.8■■□□□ 1.72
PTPA-208ENST00000411917 IBTKQ9P2D0 1353 aaPredicted RBP25.79■■□□□ 1.72
PTPA-208ENST00000411917 NBPF26B4DH59 902 aa25.78■■□□□ 1.72
PTPA-208ENST00000411917 IL6STP40189 918 aaPredicted RBP25.78■■□□□ 1.72
PTPA-208ENST00000411917 NBPF14Q5TI25 921 aa25.78■■□□□ 1.72
PTPA-208ENST00000411917 NBPF10Q6P3W6 841 aaKnown RBP25.78■■□□□ 1.72
PTPA-208ENST00000411917 NBPF15Q8N660 670 aa25.78■■□□□ 1.72
PTPA-208ENST00000411917 CCDC87Q9NVE4 849 aa25.78■■□□□ 1.72
PTPA-208ENST00000411917 PXDNLA1KZ92 1463 aa25.78■■□□□ 1.72
PTPA-208ENST00000411917 RGL2O15211 777 aa25.77■■□□□ 1.72
PTPA-208ENST00000411917 APBA3O96018 575 aa25.76■■□□□ 1.71
PTPA-208ENST00000411917 TRIM27P14373 513 aa25.76■■□□□ 1.71
PTPA-208ENST00000411917 ABCC4O15439 1325 aa25.76■■□□□ 1.71
PTPA-208ENST00000411917 DDX58O95786 925 aaKnown RBP25.75■■□□□ 1.71
PTPA-208ENST00000411917 A1BGP04217 495 aa25.75■■□□□ 1.71
PTPA-208ENST00000411917 CANXP27824 592 aaKnown RBP25.75■■□□□ 1.71
PTPA-208ENST00000411917 CRKLP46109 303 aaKnown RBP25.75■■□□□ 1.71
PTPA-208ENST00000411917 PROSER3Q2NL68 480 aa25.75■■□□□ 1.71
PTPA-208ENST00000411917 INTS5Q6P9B9 1019 aaKnown RBP25.75■■□□□ 1.71
PTPA-208ENST00000411917 NECTIN2Q92692 538 aa25.75■■□□□ 1.71
PTPA-208ENST00000411917 LINC00116Q8NCU8 138 aa25.74■■□□□ 1.71
PTPA-208ENST00000411917 FRAT1Q92837 279 aaPredicted RBP25.74■■□□□ 1.71
PTPA-208ENST00000411917 TAF1LQ8IZX4 1826 aa25.73■■□□□ 1.71
PTPA-208ENST00000411917 TCERG1O14776 1098 aaKnown RBP25.73■■□□□ 1.71
PTPA-208ENST00000411917 EIF5P55010 431 aaKnown RBP25.73■■□□□ 1.71
PTPA-208ENST00000411917 TXNRD1Q16881 649 aa25.73■■□□□ 1.71
PTPA-208ENST00000411917 ERICH6BQ5W0A0 696 aa25.73■■□□□ 1.71
PTPA-208ENST00000411917 G2E3Q7L622 706 aa25.73■■□□□ 1.71
PTPA-208ENST00000411917 DZIP1LQ8IYY4 767 aaKnown RBP25.73■■□□□ 1.71
PTPA-208ENST00000411917 PROM2Q8N271 834 aa25.72■■□□□ 1.71
PTPA-208ENST00000411917 PHAXQ9H814 394 aaKnown RBP25.72■■□□□ 1.71
PTPA-208ENST00000411917 ZBTB1Q9Y2K1 713 aa25.72■■□□□ 1.71
PTPA-208ENST00000411917 SF3B2Q13435 895 aaKnown RBP25.71■■□□□ 1.71
PTPA-208ENST00000411917 FKBP5Q13451 457 aaPredicted RBP25.71■■□□□ 1.71
PTPA-208ENST00000411917 AAMPQ13685 434 aa25.71■■□□□ 1.71
PTPA-208ENST00000411917 KSR2Q6VAB6 950 aa25.71■■□□□ 1.71
PTPA-208ENST00000411917 LRRC4BQ9NT99 713 aa25.71■■□□□ 1.71
PTPA-208ENST00000411917 C4BP0C0L5 1744 aa25.71■■□□□ 1.71
PTPA-208ENST00000411917 ATP10DQ9P241 1426 aa25.71■■□□□ 1.71
PTPA-208ENST00000411917 CAMKK2Q96RR4 588 aa25.7■■□□□ 1.7
PTPA-208ENST00000411917 A0A087WZG4 1122 aa25.69■■□□□ 1.7
PTPA-208ENST00000411917 PLIN1O60240 522 aa25.69■■□□□ 1.7
PTPA-208ENST00000411917 RPS6KA4O75676 772 aa25.69■■□□□ 1.7
PTPA-208ENST00000411917 NEFLP07196 543 aa25.69■■□□□ 1.7
PTPA-208ENST00000411917 MYL6BP14649 208 aa25.69■■□□□ 1.7
PTPA-208ENST00000411917 ADRA2BP18089 450 aa25.69■■□□□ 1.7
PTPA-208ENST00000411917 BAG6P46379 1132 aa25.69■■□□□ 1.7
PTPA-208ENST00000411917 INTS3Q68E01 1043 aaKnown RBP25.69■■□□□ 1.7
PTPA-208ENST00000411917 COPS6Q7L5N1 327 aa25.69■■□□□ 1.7
PTPA-208ENST00000411917 FTSJ3Q8IY81 847 aaKnown RBP25.69■■□□□ 1.7
PTPA-208ENST00000411917 PLBD2Q8NHP8 589 aa25.69■■□□□ 1.7
PTPA-208ENST00000411917 XAGE3Q8WTP9 111 aa25.69■■□□□ 1.7
PTPA-208ENST00000411917 ADCY9O60503 1353 aa25.68■■□□□ 1.7
PTPA-208ENST00000411917 ERVV-1B6SEH8 477 aa25.67■■□□□ 1.7
PTPA-208ENST00000411917 ANXA1P04083 346 aa25.67■■□□□ 1.7
PTPA-208ENST00000411917 CCT4P50991 539 aaKnown RBP25.67■■□□□ 1.7
PTPA-208ENST00000411917 ANKRD13DQ6ZTN6 518 aa25.67■■□□□ 1.7
PTPA-208ENST00000411917 MYH14Q7Z406 1995 aaKnown RBP25.67■■□□□ 1.7
PTPA-208ENST00000411917 N4BP2Q86UW6 1770 aaPredicted RBP25.67■■□□□ 1.7
PTPA-208ENST00000411917 DNAAF4Q8WXU2 420 aa25.66■■□□□ 1.7
PTPA-208ENST00000411917 CHMP4BQ9H444 224 aaKnown RBP25.66■■□□□ 1.7
PTPA-208ENST00000411917 PI4KAP2A4QPH2 592 aa25.65■■□□□ 1.7
PTPA-208ENST00000411917 NPM2Q86SE8 214 aaKnown RBP25.65■■□□□ 1.7
PTPA-208ENST00000411917 PI4KAP1Q8N8J0 262 aa25.65■■□□□ 1.7
PTPA-208ENST00000411917 COL15A1P39059 1388 aa25.65■■□□□ 1.7
PTPA-208ENST00000411917 RLBP1P12271 317 aa25.64■■□□□ 1.7
PTPA-208ENST00000411917 MVPQ14764 893 aaKnown RBP25.64■■□□□ 1.7
PTPA-208ENST00000411917 MAP3K15Q6ZN16 1313 aa25.63■■□□□ 1.69
PTPA-208ENST00000411917 SSFA2P28290 1259 aa25.63■■□□□ 1.69
PTPA-208ENST00000411917 C20orf194Q5TEA3 1177 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms