RNA–Protein interactions for RNA: ENST00000409870.1

C2orf88-204, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C2orf88, Length 1,441 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-204ENST00000409870 ZNF853P0CG23 659 aa33.47■■■□□ 2.95
C2orf88-204ENST00000409870 YY1P25490 414 aa33.47■■■□□ 2.95
C2orf88-204ENST00000409870 LAS1LQ9Y4W2 734 aaKnown RBP33.47■■■□□ 2.95
C2orf88-204ENST00000409870 DNAJC10Q8IXB1 793 aa33.46■■■□□ 2.95
C2orf88-204ENST00000409870 EIF4A1P60842 406 aaKnown RBP33.45■■■□□ 2.95
C2orf88-204ENST00000409870 GNAI1P63096 354 aa33.45■■■□□ 2.95
C2orf88-204ENST00000409870 IL16Q14005 1332 aa33.45■■■□□ 2.95
C2orf88-204ENST00000409870 UTRNP46939 3433 aa33.44■■■□□ 2.94
C2orf88-204ENST00000409870 ZNF521Q96K83 1311 aa33.44■■■□□ 2.94
C2orf88-204ENST00000409870 CNTNAP4Q9C0A0 1308 aa33.44■■■□□ 2.94
C2orf88-204ENST00000409870 LAMB4A4D0S4 1761 aa33.44■■■□□ 2.94
C2orf88-204ENST00000409870 MYH14Q7Z406 1995 aaKnown RBP33.44■■■□□ 2.94
C2orf88-204ENST00000409870 WDR63Q8IWG1 891 aa33.44■■■□□ 2.94
C2orf88-204ENST00000409870 AK7Q96M32 723 aa33.44■■■□□ 2.94
C2orf88-204ENST00000409870 FLAD1Q8NFF5 587 aa33.43■■■□□ 2.94
C2orf88-204ENST00000409870 MBIPQ9NS73 344 aa33.42■■■□□ 2.94
C2orf88-204ENST00000409870 SNRPA1P09661 255 aaKnown RBP33.41■■■□□ 2.94
C2orf88-204ENST00000409870 KLHL34Q8N239 644 aa33.41■■■□□ 2.94
C2orf88-204ENST00000409870 TEX13AQ9BXU3 409 aaPredicted RBP33.41■■■□□ 2.94
C2orf88-204ENST00000409870 CYP19A1P11511 503 aaPredicted RBP33.39■■■□□ 2.94
C2orf88-204ENST00000409870 RC3H1Q5TC82 1133 aaKnown RBP33.39■■■□□ 2.94
C2orf88-204ENST00000409870 CRKLP46109 303 aaKnown RBP33.38■■■□□ 2.93
C2orf88-204ENST00000409870 PRAMEF22A3QJZ6 481 aa33.37■■■□□ 2.93
C2orf88-204ENST00000409870 GIGYF1O75420 1035 aaPredicted RBP33.37■■■□□ 2.93
C2orf88-204ENST00000409870 MSL1Q68DK7 614 aa33.37■■■□□ 2.93
C2orf88-204ENST00000409870 STARD3NLO95772 234 aa33.36■■■□□ 2.93
C2orf88-204ENST00000409870 GNPATO15228 680 aa33.35■■■□□ 2.93
C2orf88-204ENST00000409870 AMIGO3Q86WK7 504 aa33.35■■■□□ 2.93
C2orf88-204ENST00000409870 CCDC87Q9NVE4 849 aa33.35■■■□□ 2.93
C2orf88-204ENST00000409870 CHD4Q14839 1912 aa33.35■■■□□ 2.93
C2orf88-204ENST00000409870 INTS5Q6P9B9 1019 aaKnown RBP33.34■■■□□ 2.93
C2orf88-204ENST00000409870 USP16Q9Y5T5 823 aa33.34■■■□□ 2.93
C2orf88-204ENST00000409870 PHF14O94880 888 aa33.33■■■□□ 2.93
C2orf88-204ENST00000409870 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.32■■■□□ 2.92
C2orf88-204ENST00000409870 SSFA2P28290 1259 aa33.32■■■□□ 2.92
C2orf88-204ENST00000409870 TSR2Q969E8 191 aaKnown RBP33.32■■■□□ 2.92
C2orf88-204ENST00000409870 KRT24Q2M2I5 525 aa33.31■■■□□ 2.92
C2orf88-204ENST00000409870 SPINK5Q9NQ38 1064 aaPredicted RBP33.31■■■□□ 2.92
C2orf88-204ENST00000409870 FANCIQ9NVI1 1328 aa33.3■■■□□ 2.92
C2orf88-204ENST00000409870 RPS6KA4O75676 772 aa33.3■■■□□ 2.92
C2orf88-204ENST00000409870 HNRNPUQ00839 825 aaKnown RBP eCLIP33.3■■■□□ 2.92
C2orf88-204ENST00000409870 ZBTB1Q9Y2K1 713 aa33.3■■■□□ 2.92
C2orf88-204ENST00000409870 GOLGB1Q14789 3259 aaKnown RBP33.29■■■□□ 2.92
C2orf88-204ENST00000409870 RTCBQ9Y3I0 505 aaKnown RBP33.29■■■□□ 2.92
C2orf88-204ENST00000409870 NLGN2Q8NFZ4 835 aa33.28■■■□□ 2.92
C2orf88-204ENST00000409870 C4AP0C0L4 1744 aa33.28■■■□□ 2.92
C2orf88-204ENST00000409870 GOLGA2Q08379 1002 aa33.28■■■□□ 2.92
C2orf88-204ENST00000409870 SOS1Q07889 1333 aaPredicted RBP33.27■■■□□ 2.92
C2orf88-204ENST00000409870 HOXB7P09629 217 aa33.27■■■□□ 2.92
C2orf88-204ENST00000409870 SMIM5Q71RC9 77 aa33.27■■■□□ 2.92
C2orf88-204ENST00000409870 MYH16Q9H6N6 1097 aa33.27■■■□□ 2.92
C2orf88-204ENST00000409870 A1BGP04217 495 aa33.26■■■□□ 2.91
C2orf88-204ENST00000409870 GPR162Q16538 588 aa33.26■■■□□ 2.91
C2orf88-204ENST00000409870 ADRA2BP18089 450 aa33.25■■■□□ 2.91
C2orf88-204ENST00000409870 DUSP27Q5VZP5 1158 aa33.24■■■□□ 2.91
C2orf88-204ENST00000409870 CANXP27824 592 aaKnown RBP33.23■■■□□ 2.91
C2orf88-204ENST00000409870 E9PSI1 815 aa33.22■■■□□ 2.91
C2orf88-204ENST00000409870 C8orf58Q8NAV2 365 aa33.22■■■□□ 2.91
C2orf88-204ENST00000409870 COL15A1P39059 1388 aa33.22■■■□□ 2.91
C2orf88-204ENST00000409870 ERBB4Q15303 1308 aa33.21■■■□□ 2.91
C2orf88-204ENST00000409870 IL6STP40189 918 aaPredicted RBP33.2■■■□□ 2.91
C2orf88-204ENST00000409870 EIF5P55010 431 aaKnown RBP33.2■■■□□ 2.91
C2orf88-204ENST00000409870 TRAPPC3LQ5T215 181 aa33.2■■■□□ 2.91
C2orf88-204ENST00000409870 PELP1Q8IZL8 1130 aaKnown RBP33.2■■■□□ 2.91
C2orf88-204ENST00000409870 NBPF26B4DH59 902 aa33.19■■■□□ 2.9
C2orf88-204ENST00000409870 SLFN5Q08AF3 891 aa33.19■■■□□ 2.9
C2orf88-204ENST00000409870 NBPF10Q6P3W6 841 aaKnown RBP33.19■■■□□ 2.9
C2orf88-204ENST00000409870 NBPF15Q8N660 670 aa33.19■■■□□ 2.9
C2orf88-204ENST00000409870 EIF2S2P20042 333 aaKnown RBP33.19■■■□□ 2.9
C2orf88-204ENST00000409870 ARHGEF1Q92888 912 aaKnown RBP33.19■■■□□ 2.9
C2orf88-204ENST00000409870 PIP4K2AP48426 406 aaPredicted RBP33.18■■■□□ 2.9
C2orf88-204ENST00000409870 TSPYL6Q8N831 410 aa33.18■■■□□ 2.9
C2orf88-204ENST00000409870 CDCA7LQ96GN5 454 aa33.18■■■□□ 2.9
C2orf88-204ENST00000409870 CD2APQ9Y5K6 639 aa33.18■■■□□ 2.9
C2orf88-204ENST00000409870 ZBED9Q6R2W3 1325 aa33.17■■■□□ 2.9
C2orf88-204ENST00000409870 ELL2O00472 640 aaPredicted RBP33.17■■■□□ 2.9
C2orf88-204ENST00000409870 HDGFL1Q5TGJ6 251 aa33.17■■■□□ 2.9
C2orf88-204ENST00000409870 EXOSC9Q06265 439 aaKnown RBP33.15■■■□□ 2.9
C2orf88-204ENST00000409870 RFC4P35249 363 aa33.14■■■□□ 2.9
C2orf88-204ENST00000409870 TWISTNBQ3B726 338 aaPredicted RBP33.14■■■□□ 2.9
C2orf88-204ENST00000409870 TRMT2AQ8IZ69 625 aaKnown RBP33.13■■■□□ 2.89
C2orf88-204ENST00000409870 NECTIN2Q92692 538 aa33.13■■■□□ 2.89
C2orf88-204ENST00000409870 ZNF330Q9Y3S2 320 aaPredicted RBP33.13■■■□□ 2.89
C2orf88-204ENST00000409870 SCN7AQ01118 1682 aa33.13■■■□□ 2.89
C2orf88-204ENST00000409870 A0A087WZG4 1122 aa33.12■■■□□ 2.89
C2orf88-204ENST00000409870 PDIA6Q15084 440 aa33.12■■■□□ 2.89
C2orf88-204ENST00000409870 USP42Q9H9J4 1324 aaKnown RBP33.12■■■□□ 2.89
C2orf88-204ENST00000409870 BCORQ6W2J9 1755 aa33.11■■■□□ 2.89
C2orf88-204ENST00000409870 YBX3P16989 372 aaKnown RBP eCLIP33.11■■■□□ 2.891e-8■□□□□ 10.1
C2orf88-204ENST00000409870 NPM2Q86SE8 214 aaKnown RBP33.11■■■□□ 2.89
C2orf88-204ENST00000409870 LRP10Q7Z4F1 713 aa33.1■■■□□ 2.89
C2orf88-204ENST00000409870 ZNF784Q8NCA9 323 aaPredicted RBP33.1■■■□□ 2.89
C2orf88-204ENST00000409870 CHMP4AQ9BY43 222 aa33.1■■■□□ 2.89
C2orf88-204ENST00000409870 DDX21Q9NR30 783 aaKnown RBP eCLIP33.1■■■□□ 2.89
C2orf88-204ENST00000409870 CHPF2Q9P2E5 772 aa33.1■■■□□ 2.89
C2orf88-204ENST00000409870 MYL6BP14649 208 aa33.09■■■□□ 2.89
C2orf88-204ENST00000409870 PROSER3Q2NL68 480 aa33.09■■■□□ 2.89
C2orf88-204ENST00000409870 SRP68Q9UHB9 627 aaKnown RBP33.09■■■□□ 2.89
C2orf88-204ENST00000409870 NARFQ9UHQ1 456 aa33.09■■■□□ 2.89
C2orf88-204ENST00000409870 DBF4Q9UBU7 674 aaPredicted RBP33.08■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms