RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 RREB1Q92766 1687 aa12.42□□□□□ -0.42
POLR1A-202ENST00000409024 SLC4A2P04920 1241 aa12.42□□□□□ -0.42
POLR1A-202ENST00000409024 INTS3Q68E01 1043 aaKnown RBP12.42□□□□□ -0.42
POLR1A-202ENST00000409024 SYT17Q9BSW7 474 aa12.42□□□□□ -0.42
POLR1A-202ENST00000409024 NUP188Q5SRE5 1749 aa12.42□□□□□ -0.42
POLR1A-202ENST00000409024 VIRMAQ69YN4 1812 aaKnown RBP12.41□□□□□ -0.42
POLR1A-202ENST00000409024 KDM2BQ8NHM5 1336 aa12.41□□□□□ -0.42
POLR1A-202ENST00000409024 CABP4P57796 275 aa12.41□□□□□ -0.42
POLR1A-202ENST00000409024 KRT24Q2M2I5 525 aa12.41□□□□□ -0.42
POLR1A-202ENST00000409024 HDGFL1Q5TGJ6 251 aa12.41□□□□□ -0.42
POLR1A-202ENST00000409024 ZNF790Q6PG37 636 aa12.41□□□□□ -0.42
POLR1A-202ENST00000409024 BARGINQ6ZT62 677 aa12.4□□□□□ -0.42
POLR1A-202ENST00000409024 ITPRIPQ8IWB1 547 aa12.4□□□□□ -0.42
POLR1A-202ENST00000409024 TMEM57Q8N5G2 664 aa12.4□□□□□ -0.42
POLR1A-202ENST00000409024 RWDD1Q9H446 243 aaPredicted RBP12.4□□□□□ -0.42
POLR1A-202ENST00000409024 ZBTB40Q9NUA8 1239 aa12.4□□□□□ -0.42
POLR1A-202ENST00000409024 CHD4Q14839 1912 aa12.39□□□□□ -0.43
POLR1A-202ENST00000409024 EXOC5O00471 708 aa12.39□□□□□ -0.43
POLR1A-202ENST00000409024 ZBTB7AO95365 584 aa12.39□□□□□ -0.43
POLR1A-202ENST00000409024 CCT4P50991 539 aaKnown RBP12.39□□□□□ -0.43
POLR1A-202ENST00000409024 TTC5Q8N0Z6 440 aa12.39□□□□□ -0.43
POLR1A-202ENST00000409024 NFATC2IPQ8NCF5 419 aa12.39□□□□□ -0.43
POLR1A-202ENST00000409024 FHDC1Q9C0D6 1143 aaPredicted RBP12.39□□□□□ -0.43
POLR1A-202ENST00000409024 USP35Q9P2H5 1018 aa12.39□□□□□ -0.43
POLR1A-202ENST00000409024 DBF4Q9UBU7 674 aaPredicted RBP12.39□□□□□ -0.43
POLR1A-202ENST00000409024 ZBTB7BO15156 539 aaPredicted RBP12.38□□□□□ -0.43
POLR1A-202ENST00000409024 PTGER2P43116 358 aa12.38□□□□□ -0.43
POLR1A-202ENST00000409024 HDAC1Q13547 482 aaPredicted RBP12.38□□□□□ -0.43
POLR1A-202ENST00000409024 FMNL2Q96PY5 1086 aa12.38□□□□□ -0.43
POLR1A-202ENST00000409024 TNNQ9UQP3 1299 aa12.38□□□□□ -0.43
POLR1A-202ENST00000409024 ATF5Q9Y2D1 282 aaPredicted RBP12.38□□□□□ -0.43
POLR1A-202ENST00000409024 PXDNLA1KZ92 1463 aa12.38□□□□□ -0.43
POLR1A-202ENST00000409024 PLSCR1O15162 318 aa12.37□□□□□ -0.43
POLR1A-202ENST00000409024 SNRPA1P09661 255 aaKnown RBP12.37□□□□□ -0.43
POLR1A-202ENST00000409024 FLIIQ13045 1269 aa12.37□□□□□ -0.43
POLR1A-202ENST00000409024 HYPKQ9NX55 129 aa12.37□□□□□ -0.43
POLR1A-202ENST00000409024 SHANK3Q9BYB0 1731 aa12.37□□□□□ -0.43
POLR1A-202ENST00000409024 TNS2Q63HR2 1409 aa12.37□□□□□ -0.43
POLR1A-202ENST00000409024 ERBB4Q15303 1308 aa12.37□□□□□ -0.43
POLR1A-202ENST00000409024 IBTKQ9P2D0 1353 aaPredicted RBP12.36□□□□□ -0.43
POLR1A-202ENST00000409024 KCNQ3O43525 872 aa12.36□□□□□ -0.43
POLR1A-202ENST00000409024 BCL11BQ9C0K0 894 aaPredicted RBP12.36□□□□□ -0.43
POLR1A-202ENST00000409024 PDGFDQ9GZP0 370 aaPredicted RBP12.36□□□□□ -0.43
POLR1A-202ENST00000409024 ANO8Q9HCE9 1232 aaPredicted RBP12.36□□□□□ -0.43
POLR1A-202ENST00000409024 WNK3Q9BYP7 1800 aa12.36□□□□□ -0.43
POLR1A-202ENST00000409024 TCERG1O14776 1098 aaKnown RBP12.35□□□□□ -0.43
POLR1A-202ENST00000409024 DDX54Q8TDD1 881 aaKnown RBP12.35□□□□□ -0.43
POLR1A-202ENST00000409024 DDX21Q9NR30 783 aaKnown RBP eCLIP12.35□□□□□ -0.43
POLR1A-202ENST00000409024 FKBP5Q13451 457 aaPredicted RBP12.34□□□□□ -0.43
POLR1A-202ENST00000409024 VSIG10Q8N0Z9 540 aa12.34□□□□□ -0.43
POLR1A-202ENST00000409024 TEX13AQ9BXU3 409 aaPredicted RBP12.34□□□□□ -0.43
POLR1A-202ENST00000409024 TMOD3Q9NYL9 352 aa12.34□□□□□ -0.43
POLR1A-202ENST00000409024 PCDHB15Q9Y5E8 787 aa12.34□□□□□ -0.43
POLR1A-202ENST00000409024 DDX58O95786 925 aaKnown RBP12.33□□□□□ -0.44
POLR1A-202ENST00000409024 EIF2S2P20042 333 aaKnown RBP12.33□□□□□ -0.44
POLR1A-202ENST00000409024 DDB1Q16531 1140 aa12.33□□□□□ -0.44
POLR1A-202ENST00000409024 GPR162Q16538 588 aa12.33□□□□□ -0.44
POLR1A-202ENST00000409024 G2E3Q7L622 706 aa12.33□□□□□ -0.44
POLR1A-202ENST00000409024 RPAP2Q8IXW5 612 aaPredicted RBP12.33□□□□□ -0.44
POLR1A-202ENST00000409024 ZNF496Q96IT1 587 aaPredicted RBP12.33□□□□□ -0.44
POLR1A-202ENST00000409024 HDAC5Q9UQL6 1122 aa12.33□□□□□ -0.44
POLR1A-202ENST00000409024 PAPPAQ13219 1627 aa12.33□□□□□ -0.44
POLR1A-202ENST00000409024 IGHDP01880 384 aa12.32□□□□□ -0.44
POLR1A-202ENST00000409024 GNAI3P08754 354 aa12.32□□□□□ -0.44
POLR1A-202ENST00000409024 SLC39A6Q13433 755 aa12.32□□□□□ -0.44
POLR1A-202ENST00000409024 MTFR1LQ9H019 292 aa12.32□□□□□ -0.44
POLR1A-202ENST00000409024 CHPF2Q9P2E5 772 aa12.32□□□□□ -0.44
POLR1A-202ENST00000409024 UBR2Q8IWV8 1755 aa12.31□□□□□ -0.44
POLR1A-202ENST00000409024 ATP10DQ9P241 1426 aa12.31□□□□□ -0.44
POLR1A-202ENST00000409024 GCC1Q96CN9 775 aa12.31□□□□□ -0.44
POLR1A-202ENST00000409024 STK32BQ9NY57 414 aa12.31□□□□□ -0.44
POLR1A-202ENST00000409024 N4BP2Q86UW6 1770 aaPredicted RBP12.3□□□□□ -0.44
POLR1A-202ENST00000409024 CASZ1Q86V15 1759 aa12.3□□□□□ -0.44
POLR1A-202ENST00000409024 ALDH1L1O75891 902 aa12.3□□□□□ -0.44
POLR1A-202ENST00000409024 KSR2Q6VAB6 950 aa12.3□□□□□ -0.44
POLR1A-202ENST00000409024 SMC5Q8IY18 1101 aa12.3□□□□□ -0.44
POLR1A-202ENST00000409024 PROM2Q8N271 834 aa12.3□□□□□ -0.44
POLR1A-202ENST00000409024 DNAAF4Q8WXU2 420 aa12.3□□□□□ -0.44
POLR1A-202ENST00000409024 ARXQ96QS3 562 aa12.3□□□□□ -0.44
POLR1A-202ENST00000409024 BCL9O00512 1426 aa12.29□□□□□ -0.44
POLR1A-202ENST00000409024 LAMB4A4D0S4 1761 aa12.29□□□□□ -0.44
POLR1A-202ENST00000409024 KCPQ6ZWJ8 1503 aa12.29□□□□□ -0.44
POLR1A-202ENST00000409024 PDIA6Q15084 440 aa12.29□□□□□ -0.44
POLR1A-202ENST00000409024 SLC15A2Q16348 729 aa12.29□□□□□ -0.44
POLR1A-202ENST00000409024 NECTIN2Q92692 538 aa12.29□□□□□ -0.44
POLR1A-202ENST00000409024 SGIP1Q9BQI5 828 aa12.29□□□□□ -0.44
POLR1A-202ENST00000409024 PHAXQ9H814 394 aaKnown RBP12.29□□□□□ -0.44
POLR1A-202ENST00000409024 GNAI2P04899 355 aa12.28□□□□□ -0.44
POLR1A-202ENST00000409024 SLC4A10Q6U841 1118 aa12.28□□□□□ -0.44
POLR1A-202ENST00000409024 ANKRD44Q8N8A2 993 aa12.28□□□□□ -0.44
POLR1A-202ENST00000409024 PIGBQ92521 554 aa12.28□□□□□ -0.44
POLR1A-202ENST00000409024 SRCIN1Q9C0H9 1055 aa12.28□□□□□ -0.44
POLR1A-202ENST00000409024 TOGARAM1Q9Y4F4 1720 aa12.28□□□□□ -0.44
POLR1A-202ENST00000409024 PI4KAP2A4QPH2 592 aa12.27□□□□□ -0.45
POLR1A-202ENST00000409024 F6X3S4 739 aa12.27□□□□□ -0.45
POLR1A-202ENST00000409024 HMMRO75330 724 aa12.27□□□□□ -0.45
POLR1A-202ENST00000409024 BEND3Q5T5X7 828 aa12.27□□□□□ -0.45
POLR1A-202ENST00000409024 PI4KAP1Q8N8J0 262 aa12.27□□□□□ -0.45
POLR1A-202ENST00000409024 USP16Q9Y5T5 823 aa12.27□□□□□ -0.45
POLR1A-202ENST00000409024 C5P01031 1676 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms