RNA–Protein interactions for RNA: ENST00000402259.5

HDAC11-202, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-202ENST00000402259 R3HDM1Q15032 1099 aaKnown RBP22.6■■□□□ 1.21
HDAC11-202ENST00000402259 SOS1Q07889 1333 aaPredicted RBP22.59■■□□□ 1.21
HDAC11-202ENST00000402259 CASZ1Q86V15 1759 aa22.59■■□□□ 1.21
HDAC11-202ENST00000402259 RPS6KA4O75676 772 aa22.59■■□□□ 1.21
HDAC11-202ENST00000402259 SSFA2P28290 1259 aa22.59■■□□□ 1.21
HDAC11-202ENST00000402259 INTS5Q6P9B9 1019 aaKnown RBP22.59■■□□□ 1.21
HDAC11-202ENST00000402259 MYH16Q9H6N6 1097 aa22.59■■□□□ 1.21
HDAC11-202ENST00000402259 USP16Q9Y5T5 823 aa22.59■■□□□ 1.21
HDAC11-202ENST00000402259 GNPATO15228 680 aa22.58■■□□□ 1.21
HDAC11-202ENST00000402259 ADRA2BP18089 450 aa22.58■■□□□ 1.21
HDAC11-202ENST00000402259 GOLGA2Q08379 1002 aa22.58■■□□□ 1.21
HDAC11-202ENST00000402259 RTCBQ9Y3I0 505 aaKnown RBP22.58■■□□□ 1.21
HDAC11-202ENST00000402259 PNPLA7Q6ZV29 1317 aa22.57■■□□□ 1.2
HDAC11-202ENST00000402259 PRAMEF22A3QJZ6 481 aa22.57■■□□□ 1.2
HDAC11-202ENST00000402259 HNRNPUQ00839 825 aaKnown RBP eCLIP22.57■■□□□ 1.2
HDAC11-202ENST00000402259 ERBB4Q15303 1308 aa22.57■■□□□ 1.2
HDAC11-202ENST00000402259 FANCIQ9NVI1 1328 aa22.57■■□□□ 1.2
HDAC11-202ENST00000402259 PSDA5PKW4 1024 aaPredicted RBP22.55■■□□□ 1.2
HDAC11-202ENST00000402259 E9PSI1 815 aa22.55■■□□□ 1.2
HDAC11-202ENST00000402259 TSR2Q969E8 191 aaKnown RBP22.55■■□□□ 1.2
HDAC11-202ENST00000402259 SPINK5Q9NQ38 1064 aaPredicted RBP22.55■■□□□ 1.2
HDAC11-202ENST00000402259 ZBTB1Q9Y2K1 713 aa22.55■■□□□ 1.2
HDAC11-202ENST00000402259 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.54■■□□□ 1.2
HDAC11-202ENST00000402259 DUSP27Q5VZP5 1158 aa22.54■■□□□ 1.2
HDAC11-202ENST00000402259 CHMP4AQ9BY43 222 aa22.54■■□□□ 1.2
HDAC11-202ENST00000402259 A1BGP04217 495 aa22.53■■□□□ 1.2
HDAC11-202ENST00000402259 IL6STP40189 918 aaPredicted RBP22.53■■□□□ 1.2
HDAC11-202ENST00000402259 KRT24Q2M2I5 525 aa22.53■■□□□ 1.2
HDAC11-202ENST00000402259 AMIGO3Q86WK7 504 aa22.53■■□□□ 1.2
HDAC11-202ENST00000402259 SLC16A10Q8TF71 515 aa22.53■■□□□ 1.2
HDAC11-202ENST00000402259 C4AP0C0L4 1744 aa22.53■■□□□ 1.2
HDAC11-202ENST00000402259 EIF5P55010 431 aaKnown RBP22.52■■□□□ 1.2
HDAC11-202ENST00000402259 SLFN5Q08AF3 891 aa22.52■■□□□ 1.2
HDAC11-202ENST00000402259 TRAPPC3LQ5T215 181 aa22.52■■□□□ 1.2
HDAC11-202ENST00000402259 COL23A1Q86Y22 540 aaPredicted RBP22.52■■□□□ 1.2
HDAC11-202ENST00000402259 ZBED9Q6R2W3 1325 aa22.52■■□□□ 1.2
HDAC11-202ENST00000402259 C8orf58Q8NAV2 365 aa22.51■■□□□ 1.19
HDAC11-202ENST00000402259 COL15A1P39059 1388 aa22.5■■□□□ 1.19
HDAC11-202ENST00000402259 A0A087WZG4 1122 aa22.5■■□□□ 1.19
HDAC11-202ENST00000402259 PHF14O94880 888 aa22.5■■□□□ 1.19
HDAC11-202ENST00000402259 CANXP27824 592 aaKnown RBP22.5■■□□□ 1.19
HDAC11-202ENST00000402259 TRMT2AQ8IZ69 625 aaKnown RBP22.5■■□□□ 1.19
HDAC11-202ENST00000402259 COL24A1Q17RW2 1714 aa22.49■■□□□ 1.19
HDAC11-202ENST00000402259 NBPF26B4DH59 902 aa22.49■■□□□ 1.19
HDAC11-202ENST00000402259 HDGFL1Q5TGJ6 251 aa22.49■■□□□ 1.19
HDAC11-202ENST00000402259 NBPF10Q6P3W6 841 aaKnown RBP22.49■■□□□ 1.19
HDAC11-202ENST00000402259 NBPF15Q8N660 670 aa22.49■■□□□ 1.19
HDAC11-202ENST00000402259 ARHGEF1Q92888 912 aaKnown RBP22.49■■□□□ 1.19
HDAC11-202ENST00000402259 EIF2S2P20042 333 aaKnown RBP22.48■■□□□ 1.19
HDAC11-202ENST00000402259 PDGFDQ9GZP0 370 aaPredicted RBP22.48■■□□□ 1.19
HDAC11-202ENST00000402259 EXOSC9Q06265 439 aaKnown RBP22.47■■□□□ 1.19
HDAC11-202ENST00000402259 TWISTNBQ3B726 338 aaPredicted RBP22.47■■□□□ 1.19
HDAC11-202ENST00000402259 TSPYL6Q8N831 410 aa22.47■■□□□ 1.19
HDAC11-202ENST00000402259 RFC4P35249 363 aa22.46■■□□□ 1.19
HDAC11-202ENST00000402259 NPM2Q86SE8 214 aaKnown RBP22.46■■□□□ 1.19
HDAC11-202ENST00000402259 CDCA7LQ96GN5 454 aa22.46■■□□□ 1.19
HDAC11-202ENST00000402259 MTFR1LQ9H019 292 aa22.46■■□□□ 1.19
HDAC11-202ENST00000402259 DDX21Q9NR30 783 aaKnown RBP eCLIP22.46■■□□□ 1.19
HDAC11-202ENST00000402259 ELL2O00472 640 aaPredicted RBP22.45■■□□□ 1.18
HDAC11-202ENST00000402259 MSH5O43196 834 aa22.45■■□□□ 1.18
HDAC11-202ENST00000402259 PDIA6Q15084 440 aa22.45■■□□□ 1.18
HDAC11-202ENST00000402259 SMIM5Q71RC9 77 aa22.45■■□□□ 1.18
HDAC11-202ENST00000402259 DBF4Q9UBU7 674 aaPredicted RBP22.45■■□□□ 1.18
HDAC11-202ENST00000402259 NARFQ9UHQ1 456 aa22.45■■□□□ 1.18
HDAC11-202ENST00000402259 USP42Q9H9J4 1324 aaKnown RBP22.45■■□□□ 1.18
HDAC11-202ENST00000402259 CACNA1FO60840 1977 aa22.45■■□□□ 1.18
HDAC11-202ENST00000402259 RGL2O15211 777 aa22.44■■□□□ 1.18
HDAC11-202ENST00000402259 SCN7AQ01118 1682 aa22.44■■□□□ 1.18
HDAC11-202ENST00000402259 CCDC30Q5VVM6 783 aa22.44■■□□□ 1.18
HDAC11-202ENST00000402259 LRP10Q7Z4F1 713 aa22.44■■□□□ 1.18
HDAC11-202ENST00000402259 BCORQ6W2J9 1755 aa22.43■■□□□ 1.18
HDAC11-202ENST00000402259 VAMP4O75379 141 aa22.43■■□□□ 1.18
HDAC11-202ENST00000402259 PIP4K2AP48426 406 aaPredicted RBP22.43■■□□□ 1.18
HDAC11-202ENST00000402259 ZPR1O75312 459 aa22.42■■□□□ 1.18
HDAC11-202ENST00000402259 CHPF2Q9P2E5 772 aa22.42■■□□□ 1.18
HDAC11-202ENST00000402259 GYS1P13807 737 aa22.41■■□□□ 1.18
HDAC11-202ENST00000402259 NECTIN2Q92692 538 aa22.41■■□□□ 1.18
HDAC11-202ENST00000402259 HYPKQ9NX55 129 aa22.41■■□□□ 1.18
HDAC11-202ENST00000402259 ZNF330Q9Y3S2 320 aaPredicted RBP22.41■■□□□ 1.18
HDAC11-202ENST00000402259 LRP5O75197 1615 aa22.41■■□□□ 1.18
HDAC11-202ENST00000402259 ZBTB7AO95365 584 aa22.4■■□□□ 1.18
HDAC11-202ENST00000402259 CT47B1P0C2W7 299 aaPredicted RBP22.4■■□□□ 1.18
HDAC11-202ENST00000402259 MYL6BP14649 208 aa22.4■■□□□ 1.18
HDAC11-202ENST00000402259 PROSER3Q2NL68 480 aa22.4■■□□□ 1.18
HDAC11-202ENST00000402259 DZIP3Q86Y13 1208 aaKnown RBP22.4■■□□□ 1.18
HDAC11-202ENST00000402259 NLGN1Q8N2Q7 840 aa22.4■■□□□ 1.18
HDAC11-202ENST00000402259 ZNF428Q96B54 188 aa22.4■■□□□ 1.18
HDAC11-202ENST00000402259 SPON1Q9HCB6 807 aa22.4■■□□□ 1.18
HDAC11-202ENST00000402259 SRP68Q9UHB9 627 aaKnown RBP22.39■■□□□ 1.17
HDAC11-202ENST00000402259 CAMTA2O94983 1202 aa22.38■■□□□ 1.17
HDAC11-202ENST00000402259 USPL1Q5W0Q7 1092 aa22.38■■□□□ 1.17
HDAC11-202ENST00000402259 STK31Q9BXU1 1019 aa22.38■■□□□ 1.17
HDAC11-202ENST00000402259 TBC1D2BQ9UPU7 963 aa22.38■■□□□ 1.17
HDAC11-202ENST00000402259 ERVV-1B6SEH8 477 aa22.37■■□□□ 1.17
HDAC11-202ENST00000402259 CLEC4GQ6UXB4 293 aa22.37■■□□□ 1.17
HDAC11-202ENST00000402259 KIF6Q6ZMV9 814 aa22.37■■□□□ 1.17
HDAC11-202ENST00000402259 SGIP1Q9BQI5 828 aa22.37■■□□□ 1.17
HDAC11-202ENST00000402259 ANXA1P04083 346 aa22.36■■□□□ 1.17
HDAC11-202ENST00000402259 BCL2L12Q9HB09 334 aa22.36■■□□□ 1.17
HDAC11-202ENST00000402259 MAP3K15Q6ZN16 1313 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms