RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 RHPN1Q8TCX5 695 aa12.79□□□□□ -0.36
PPP4R1-203ENST00000400556 PA2G4Q9UQ80 394 aaKnown RBP12.79□□□□□ -0.36
PPP4R1-203ENST00000400556 TMEM2Q9UHN6 1383 aa12.78□□□□□ -0.36
PPP4R1-203ENST00000400556 CUL4AQ13619 759 aa12.78□□□□□ -0.36
PPP4R1-203ENST00000400556 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.78□□□□□ -0.36
PPP4R1-203ENST00000400556 TCEANC2Q96MN5 208 aa12.78□□□□□ -0.36
PPP4R1-203ENST00000400556 SPATA31D1Q6ZQQ2 1576 aa12.78□□□□□ -0.36
PPP4R1-203ENST00000400556 UQCRHLA0A096LP55 91 aa12.78□□□□□ -0.36
PPP4R1-203ENST00000400556 UQCRHP07919 91 aa12.78□□□□□ -0.36
PPP4R1-203ENST00000400556 AK2P54819 239 aa12.78□□□□□ -0.36
PPP4R1-203ENST00000400556 COL9A3Q14050 684 aaPredicted RBP12.78□□□□□ -0.36
PPP4R1-203ENST00000400556 DNTTIP2Q5QJE6 756 aaKnown RBP12.78□□□□□ -0.36
PPP4R1-203ENST00000400556 ZKSCAN5Q9Y2L8 839 aa12.78□□□□□ -0.36
PPP4R1-203ENST00000400556 REREQ9P2R6 1566 aa12.78□□□□□ -0.36
PPP4R1-203ENST00000400556 MBD3O95983 291 aa12.78□□□□□ -0.36
PPP4R1-203ENST00000400556 HCLS1P14317 486 aaPredicted RBP12.78□□□□□ -0.36
PPP4R1-203ENST00000400556 GLIPR1L2Q4G1C9 344 aa12.78□□□□□ -0.36
PPP4R1-203ENST00000400556 IGSF1Q8N6C5 1336 aa12.78□□□□□ -0.36
PPP4R1-203ENST00000400556 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.77□□□□□ -0.36
PPP4R1-203ENST00000400556 FAM177BA6PVY3 158 aa12.77□□□□□ -0.36
PPP4R1-203ENST00000400556 TPM2P07951 284 aa12.77□□□□□ -0.36
PPP4R1-203ENST00000400556 HOXC9P31274 260 aa12.77□□□□□ -0.36
PPP4R1-203ENST00000400556 CCDC83Q8IWF9 413 aa12.77□□□□□ -0.37
PPP4R1-203ENST00000400556 ZMYND15Q9H091 742 aa12.77□□□□□ -0.37
PPP4R1-203ENST00000400556 SNX14Q9Y5W7 946 aa12.77□□□□□ -0.37
PPP4R1-203ENST00000400556 CASTP20810 708 aaKnown RBP12.77□□□□□ -0.37
PPP4R1-203ENST00000400556 ADAMTS13Q76LX8 1427 aa12.77□□□□□ -0.37
PPP4R1-203ENST00000400556 TTC12Q9H892 705 aaPredicted RBP12.76□□□□□ -0.37
PPP4R1-203ENST00000400556 ARHGEF10O15013 1369 aa12.76□□□□□ -0.37
PPP4R1-203ENST00000400556 ADCK5Q3MIX3 580 aa12.76□□□□□ -0.37
PPP4R1-203ENST00000400556 FAM173BQ6P4H8 233 aa12.76□□□□□ -0.37
PPP4R1-203ENST00000400556 MPRIPQ6WCQ1 1025 aa12.76□□□□□ -0.37
PPP4R1-203ENST00000400556 NECAB1Q8N987 351 aa12.76□□□□□ -0.37
PPP4R1-203ENST00000400556 LRRC59Q96AG4 307 aaKnown RBP12.76□□□□□ -0.37
PPP4R1-203ENST00000400556 SBNO1A3KN83 1393 aa12.76□□□□□ -0.37
PPP4R1-203ENST00000400556 AKAP12Q02952 1782 aa12.76□□□□□ -0.37
PPP4R1-203ENST00000400556 FERMT3Q86UX7 667 aa12.76□□□□□ -0.37
PPP4R1-203ENST00000400556 PI4K2BQ8TCG2 481 aa12.76□□□□□ -0.37
PPP4R1-203ENST00000400556 PTPRUQ92729 1446 aa12.76□□□□□ -0.37
PPP4R1-203ENST00000400556 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.76□□□□□ -0.37
PPP4R1-203ENST00000400556 PRAMEF22A3QJZ6 481 aa12.75□□□□□ -0.37
PPP4R1-203ENST00000400556 VPS37CA5D8V6 355 aaPredicted RBP12.75□□□□□ -0.37
PPP4R1-203ENST00000400556 HSPA4P34932 840 aa12.75□□□□□ -0.37
PPP4R1-203ENST00000400556 MCM2P49736 904 aa12.75□□□□□ -0.37
PPP4R1-203ENST00000400556 RUFY3Q7L099 469 aa12.75□□□□□ -0.37
PPP4R1-203ENST00000400556 PTH1RQ03431 593 aa12.75□□□□□ -0.37
PPP4R1-203ENST00000400556 GIMAP6Q6P9H5 292 aa12.75□□□□□ -0.37
PPP4R1-203ENST00000400556 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.75□□□□□ -0.37
PPP4R1-203ENST00000400556 SYT1P21579 422 aa12.75□□□□□ -0.37
PPP4R1-203ENST00000400556 PRPF40BQ6NWY9 871 aaKnown RBP12.75□□□□□ -0.37
PPP4R1-203ENST00000400556 LMOD2Q6P5Q4 547 aa12.75□□□□□ -0.37
PPP4R1-203ENST00000400556 SSH3Q8TE77 659 aa12.75□□□□□ -0.37
PPP4R1-203ENST00000400556 STAP2Q9UGK3 403 aa12.75□□□□□ -0.37
PPP4R1-203ENST00000400556 PPP6R1Q9UPN7 881 aa12.74□□□□□ -0.37
PPP4R1-203ENST00000400556 USP31Q70CQ4 1352 aa12.74□□□□□ -0.37
PPP4R1-203ENST00000400556 NRKQ7Z2Y5 1582 aa12.74□□□□□ -0.37
PPP4R1-203ENST00000400556 SGSM2O43147 1006 aa12.74□□□□□ -0.37
PPP4R1-203ENST00000400556 CWF19L2Q2TBE0 894 aaKnown RBP12.74□□□□□ -0.37
PPP4R1-203ENST00000400556 JAKMIP1Q96N16 626 aaKnown RBP12.74□□□□□ -0.37
PPP4R1-203ENST00000400556 WDR33Q9C0J8 1336 aaKnown RBP12.74□□□□□ -0.37
PPP4R1-203ENST00000400556 DNM1Q05193 864 aaKnown RBP12.74□□□□□ -0.37
PPP4R1-203ENST00000400556 AIMP1Q12904 312 aaKnown RBP12.74□□□□□ -0.37
PPP4R1-203ENST00000400556 SIL1Q9H173 461 aa12.74□□□□□ -0.37
PPP4R1-203ENST00000400556 SMC3Q9UQE7 1217 aa12.74□□□□□ -0.37
PPP4R1-203ENST00000400556 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.74□□□□□ -0.37
PPP4R1-203ENST00000400556 RPAP1Q9BWH6 1393 aaPredicted RBP12.74□□□□□ -0.37
PPP4R1-203ENST00000400556 ANAPC15P60006 121 aa12.73□□□□□ -0.37
PPP4R1-203ENST00000400556 CCDC39Q9UFE4 941 aa12.73□□□□□ -0.37
PPP4R1-203ENST00000400556 TECPR2O15040 1411 aa12.73□□□□□ -0.37
PPP4R1-203ENST00000400556 PROSER3Q2NL68 480 aa12.73□□□□□ -0.37
PPP4R1-203ENST00000400556 SIRT1Q96EB6 747 aa12.73□□□□□ -0.37
PPP4R1-203ENST00000400556 INTS4Q96HW7 963 aaKnown RBP12.73□□□□□ -0.37
PPP4R1-203ENST00000400556 DIAPH3Q9NSV4 1193 aa12.73□□□□□ -0.37
PPP4R1-203ENST00000400556 EID1Q9Y6B2 187 aa12.73□□□□□ -0.37
PPP4R1-203ENST00000400556 MAP3K5Q99683 1374 aa12.73□□□□□ -0.37
PPP4R1-203ENST00000400556 KCNJ4P48050 445 aa12.73□□□□□ -0.37
PPP4R1-203ENST00000400556 LSG1Q9H089 658 aaKnown RBP12.73□□□□□ -0.37
PPP4R1-203ENST00000400556 CCDC9Q9Y3X0 531 aaKnown RBP12.73□□□□□ -0.37
PPP4R1-203ENST00000400556 KDRP35968 1356 aa12.73□□□□□ -0.37
PPP4R1-203ENST00000400556 RAD50Q92878 1312 aa12.73□□□□□ -0.37
PPP4R1-203ENST00000400556 STX6O43752 255 aa12.72□□□□□ -0.37
PPP4R1-203ENST00000400556 NBPF6Q5VWK0 638 aa12.72□□□□□ -0.37
PPP4R1-203ENST00000400556 CNTROBQ8N137 903 aa12.72□□□□□ -0.37
PPP4R1-203ENST00000400556 KLHDC4Q8TBB5 520 aa12.72□□□□□ -0.37
PPP4R1-203ENST00000400556 NBPF4Q96M43 638 aa12.72□□□□□ -0.37
PPP4R1-203ENST00000400556 ZNF500O60304 480 aaPredicted RBP12.72□□□□□ -0.37
PPP4R1-203ENST00000400556 DNAAF4Q8WXU2 420 aa12.72□□□□□ -0.37
PPP4R1-203ENST00000400556 SYAP1Q96A49 352 aaPredicted RBP12.72□□□□□ -0.37
PPP4R1-203ENST00000400556 KCNA6P17658 529 aa12.72□□□□□ -0.37
PPP4R1-203ENST00000400556 SPC24Q8NBT2 197 aa12.72□□□□□ -0.37
PPP4R1-203ENST00000400556 KIF1BPQ96EK5 621 aa12.72□□□□□ -0.37
PPP4R1-203ENST00000400556 CCDC8Q9H0W5 538 aaPredicted RBP12.72□□□□□ -0.37
PPP4R1-203ENST00000400556 ADCY5O95622 1261 aa12.71□□□□□ -0.37
PPP4R1-203ENST00000400556 ZSCAN22P10073 491 aaPredicted RBP12.71□□□□□ -0.37
PPP4R1-203ENST00000400556 GJB2P29033 226 aa12.71□□□□□ -0.37
PPP4R1-203ENST00000400556 C9orf78Q9NZ63 289 aaPredicted RBP12.71□□□□□ -0.37
PPP4R1-203ENST00000400556 RGPD8O14715 1765 aaPredicted RBP12.71□□□□□ -0.37
PPP4R1-203ENST00000400556 BCL11BQ9C0K0 894 aaPredicted RBP12.71□□□□□ -0.37
PPP4R1-203ENST00000400556 TEFQ10587 303 aa12.71□□□□□ -0.38
PPP4R1-203ENST00000400556 CAMK4Q16566 473 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms