RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 MIER1Q8N108 512 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 MNS1Q8NEH6 495 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 NUCB2P80303 420 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 CABP2Q9NPB3 220 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 EHBP1Q8NDI1 1231 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 RCAN3Q9UKA8 241 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 TPCN1Q9ULQ1 816 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 PRPHP41219 470 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 HNRNPMP52272 730 aaKnown RBP eCLIP3.19□□□□□ -1.9
CHD9-202ENST00000398510 PDE4BQ07343 736 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 NOLC1Q14978 699 aaKnown RBP eCLIP3.19□□□□□ -1.9
CHD9-202ENST00000398510 TMED8Q6PL24 325 aaPredicted RBP3.19□□□□□ -1.9
CHD9-202ENST00000398510 CDC5LQ99459 802 aaKnown RBP3.19□□□□□ -1.9
CHD9-202ENST00000398510 KCNG1Q9UIX4 513 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 ERLIN1O75477 346 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 BAG3O95817 575 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 AEBP1Q8IUX7 1158 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 FAM114A1Q8IWE2 563 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 PRDM11Q9NQV5 511 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 HDAC9Q9UKV0 1011 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 CFAP45Q9UL16 551 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 PDZRN3Q9UPQ7 1066 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 TNNQ9UQP3 1299 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 RAD50Q92878 1312 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 ANKRD36BQ8N2N9 1353 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 ASXL2Q76L83 1435 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 USP32Q8NFA0 1604 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 TCHHQ07283 1943 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 A2MP01023 1474 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 CBFA2T2O43439 604 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 NT5C2P49902 561 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 FKBP5Q13451 457 aaPredicted RBP3.19□□□□□ -1.9
CHD9-202ENST00000398510 TMOD3Q9NYL9 352 aa3.19□□□□□ -1.9
CHD9-202ENST00000398510 KIF2AO00139 706 aaPredicted RBP3.18□□□□□ -1.9
CHD9-202ENST00000398510 CALM1P0DP23 149 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 CALM2P0DP24 149 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 CALM3P0DP25 149 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 CABP4P57796 275 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 SEPT7Q16181 437 aaKnown RBP3.18□□□□□ -1.9
CHD9-202ENST00000398510 TMCO3Q6UWJ1 677 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 ZNF804AQ7Z570 1209 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 FLAD1Q8NFF5 587 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 KIAA1524Q8TCG1 905 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 GOLGA1Q92805 767 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 ANKIB1Q9P2G1 1089 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 MLH3Q9UHC1 1453 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 ATP10DQ9P241 1426 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 KIF11P52732 1056 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 ANAPC15P60006 121 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 AMPD3Q01432 767 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 SLC26A8Q96RN1 970 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 IFT172Q9UG01 1749 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 ADGRB2O60241 1585 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 PARD3Q8TEW0 1356 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 PARP4Q9UKK3 1724 aaKnown RBP3.18□□□□□ -1.9
CHD9-202ENST00000398510 CCDC152Q4G0S7 254 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.18□□□□□ -1.9
CHD9-202ENST00000398510 V9GYY5 206 aaPredicted RBP3.18□□□□□ -1.9
CHD9-202ENST00000398510 PPLO60437 1756 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 PDE6BP35913 854 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 TNNI2P48788 182 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 TMEM266Q2M3C6 531 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 MAP9Q49MG5 647 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 PPP1R42Q7Z4L9 355 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 CEP112Q8N8E3 955 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 NLRP2Q9NX02 1062 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 RAD21O60216 631 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 USO1O60763 962 aaKnown RBP3.18□□□□□ -1.9
CHD9-202ENST00000398510 TNFAIP1Q13829 316 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 NFE2L2Q16236 605 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 FAM161AQ3B820 660 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 TOM1L2Q6ZVM7 507 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 CCDC117Q8IWD4 279 aaPredicted RBP3.18□□□□□ -1.9
CHD9-202ENST00000398510 CLASRPQ8N2M8 674 aaKnown RBP3.18□□□□□ -1.9
CHD9-202ENST00000398510 ZC3H15Q8WU90 426 aaKnown RBP3.18□□□□□ -1.9
CHD9-202ENST00000398510 JDP2Q8WYK2 163 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 ZMYM4Q5VZL5 1548 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 E2F5Q15329 346 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 SLC17A8Q8NDX2 589 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 USH1CQ9Y6N9 552 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 IFI16Q16666 785 aaKnown RBP3.18□□□□□ -1.9
CHD9-202ENST00000398510 TNRQ92752 1358 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 BRD2P25440 801 aaKnown RBP3.18□□□□□ -1.9
CHD9-202ENST00000398510 DDX11Q96FC9 970 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 SMTNL1A8MU46 457 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 EPB41L2O43491 1005 aaKnown RBP3.18□□□□□ -1.9
CHD9-202ENST00000398510 PAX3P23760 479 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 ESCO1Q5FWF5 840 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 SASS6Q6UVJ0 657 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 BICDL1Q6ZP65 573 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 ERMNQ8TAM6 284 aa3.18□□□□□ -1.9
CHD9-202ENST00000398510 PCMTD1Q96MG8 357 aaPredicted RBP3.18□□□□□ -1.9
CHD9-202ENST00000398510 GOLIM4O00461 696 aa3.17□□□□□ -1.9
CHD9-202ENST00000398510 MCTP2Q6DN12 878 aa3.17□□□□□ -1.9
CHD9-202ENST00000398510 SLC4A10Q6U841 1118 aa3.17□□□□□ -1.9
CHD9-202ENST00000398510 PROM2Q8N271 834 aa3.17□□□□□ -1.9
CHD9-202ENST00000398510 NOP58Q9Y2X3 529 aaKnown RBP3.17□□□□□ -1.9
CHD9-202ENST00000398510 BAG4O95429 457 aaKnown RBP3.17□□□□□ -1.9
CHD9-202ENST00000398510 IMMTQ16891 758 aaKnown RBP3.17□□□□□ -1.9
CHD9-202ENST00000398510 HYPKQ9NX55 129 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms