RNA–Protein interactions for RNA: ENST00000397370.3

RBM39-205, Transcript of RNA binding motif protein 39, humanhuman

TSL 2 BASIC

Gene RBM39, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-205ENST00000397370 LAMB4A4D0S4 1761 aa21.02■□□□□ 0.96
RBM39-205ENST00000397370 GIGYF1O75420 1035 aaPredicted RBP21.02■□□□□ 0.96
RBM39-205ENST00000397370 MBIPQ9NS73 344 aa21.02■□□□□ 0.96
RBM39-205ENST00000397370 CCDC87Q9NVE4 849 aa21.02■□□□□ 0.96
RBM39-205ENST00000397370 USP16Q9Y5T5 823 aa21.02■□□□□ 0.96
RBM39-205ENST00000397370 RPS6KA4O75676 772 aa21.01■□□□□ 0.95
RBM39-205ENST00000397370 SSFA2P28290 1259 aa21.01■□□□□ 0.95
RBM39-205ENST00000397370 SMIM5Q71RC9 77 aa21.01■□□□□ 0.95
RBM39-205ENST00000397370 COL23A1Q86Y22 540 aaPredicted RBP21.01■□□□□ 0.95
RBM39-205ENST00000397370 WDR63Q8IWG1 891 aa21.01■□□□□ 0.95
RBM39-205ENST00000397370 FLAD1Q8NFF5 587 aa21.01■□□□□ 0.95
RBM39-205ENST00000397370 RTCBQ9Y3I0 505 aaKnown RBP21.01■□□□□ 0.95
RBM39-205ENST00000397370 IL16Q14005 1332 aa21.01■□□□□ 0.95
RBM39-205ENST00000397370 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21■□□□□ 0.95
RBM39-205ENST00000397370 PHF14O94880 888 aa21■□□□□ 0.95
RBM39-205ENST00000397370 ZBTB1Q9Y2K1 713 aa20.99■□□□□ 0.95
RBM39-205ENST00000397370 ZNF521Q96K83 1311 aa20.98■□□□□ 0.95
RBM39-205ENST00000397370 MSH5O43196 834 aa20.97■□□□□ 0.95
RBM39-205ENST00000397370 A1BGP04217 495 aa20.97■□□□□ 0.95
RBM39-205ENST00000397370 KRT24Q2M2I5 525 aa20.97■□□□□ 0.95
RBM39-205ENST00000397370 TRAPPC3LQ5T215 181 aa20.97■□□□□ 0.95
RBM39-205ENST00000397370 SOS1Q07889 1333 aaPredicted RBP20.97■□□□□ 0.95
RBM39-205ENST00000397370 C4AP0C0L4 1744 aa20.96■□□□□ 0.95
RBM39-205ENST00000397370 ADRA2BP18089 450 aa20.96■□□□□ 0.95
RBM39-205ENST00000397370 CANXP27824 592 aaKnown RBP20.96■□□□□ 0.95
RBM39-205ENST00000397370 SLC16A10Q8TF71 515 aa20.96■□□□□ 0.95
RBM39-205ENST00000397370 ZBTB7AO95365 584 aa20.95■□□□□ 0.94
RBM39-205ENST00000397370 ARHGEF1Q92888 912 aaKnown RBP20.95■□□□□ 0.94
RBM39-205ENST00000397370 TSR2Q969E8 191 aaKnown RBP20.95■□□□□ 0.94
RBM39-205ENST00000397370 IL6STP40189 918 aaPredicted RBP20.93■□□□□ 0.94
RBM39-205ENST00000397370 EIF5P55010 431 aaKnown RBP20.93■□□□□ 0.94
RBM39-205ENST00000397370 MTFR1LQ9H019 292 aa20.93■□□□□ 0.94
RBM39-205ENST00000397370 SPINK5Q9NQ38 1064 aaPredicted RBP20.93■□□□□ 0.94
RBM39-205ENST00000397370 COL24A1Q17RW2 1714 aa20.92■□□□□ 0.94
RBM39-205ENST00000397370 NBPF26B4DH59 902 aa20.92■□□□□ 0.94
RBM39-205ENST00000397370 RFC4P35249 363 aa20.92■□□□□ 0.94
RBM39-205ENST00000397370 PIP4K2AP48426 406 aaPredicted RBP20.92■□□□□ 0.94
RBM39-205ENST00000397370 DUSP27Q5VZP5 1158 aa20.92■□□□□ 0.94
RBM39-205ENST00000397370 NBPF10Q6P3W6 841 aaKnown RBP20.92■□□□□ 0.94
RBM39-205ENST00000397370 NBPF15Q8N660 670 aa20.92■□□□□ 0.94
RBM39-205ENST00000397370 COL15A1P39059 1388 aa20.92■□□□□ 0.94
RBM39-205ENST00000397370 HOXB7P09629 217 aa20.91■□□□□ 0.94
RBM39-205ENST00000397370 EIF2S2P20042 333 aaKnown RBP20.91■□□□□ 0.94
RBM39-205ENST00000397370 SPON1Q9HCB6 807 aa20.91■□□□□ 0.94
RBM39-205ENST00000397370 FANCIQ9NVI1 1328 aa20.91■□□□□ 0.94
RBM39-205ENST00000397370 ATF5Q9Y2D1 282 aaPredicted RBP20.91■□□□□ 0.94
RBM39-205ENST00000397370 GOLGA2Q08379 1002 aa20.9■□□□□ 0.94
RBM39-205ENST00000397370 C8orf58Q8NAV2 365 aa20.9■□□□□ 0.94
RBM39-205ENST00000397370 LRP5O75197 1615 aa20.89■□□□□ 0.94
RBM39-205ENST00000397370 ERBB4Q15303 1308 aa20.89■□□□□ 0.93
RBM39-205ENST00000397370 MYH16Q9H6N6 1097 aa20.89■□□□□ 0.93
RBM39-205ENST00000397370 ZNF330Q9Y3S2 320 aaPredicted RBP20.89■□□□□ 0.93
RBM39-205ENST00000397370 USP42Q9H9J4 1324 aaKnown RBP20.88■□□□□ 0.93
RBM39-205ENST00000397370 A0A087WZG4 1122 aa20.88■□□□□ 0.93
RBM39-205ENST00000397370 ELL2O00472 640 aaPredicted RBP20.88■□□□□ 0.93
RBM39-205ENST00000397370 HNRNPUQ00839 825 aaKnown RBP eCLIP20.88■□□□□ 0.93
RBM39-205ENST00000397370 SRP68Q9UHB9 627 aaKnown RBP20.88■□□□□ 0.93
RBM39-205ENST00000397370 HDGFL1Q5TGJ6 251 aa20.87■□□□□ 0.93
RBM39-205ENST00000397370 MSL1Q68DK7 614 aa20.87■□□□□ 0.93
RBM39-205ENST00000397370 NPM2Q86SE8 214 aaKnown RBP20.87■□□□□ 0.93
RBM39-205ENST00000397370 TSPYL6Q8N831 410 aa20.87■□□□□ 0.93
RBM39-205ENST00000397370 NECTIN2Q92692 538 aa20.87■□□□□ 0.93
RBM39-205ENST00000397370 NARFQ9UHQ1 456 aa20.87■□□□□ 0.93
RBM39-205ENST00000397370 E9PSI1 815 aa20.86■□□□□ 0.93
RBM39-205ENST00000397370 ZPR1O75312 459 aa20.86■□□□□ 0.93
RBM39-205ENST00000397370 GYS1P13807 737 aa20.86■□□□□ 0.93
RBM39-205ENST00000397370 PTGER2P43116 358 aa20.86■□□□□ 0.93
RBM39-205ENST00000397370 SGIP1Q9BQI5 828 aa20.86■□□□□ 0.93
RBM39-205ENST00000397370 MYL6BP14649 208 aa20.85■□□□□ 0.93
RBM39-205ENST00000397370 SLFN5Q08AF3 891 aa20.85■□□□□ 0.93
RBM39-205ENST00000397370 PDIA6Q15084 440 aa20.85■□□□□ 0.93
RBM39-205ENST00000397370 USPL1Q5W0Q7 1092 aa20.85■□□□□ 0.93
RBM39-205ENST00000397370 TBC1D2BQ9UPU7 963 aa20.85■□□□□ 0.93
RBM39-205ENST00000397370 SCN7AQ01118 1682 aa20.84■□□□□ 0.93
RBM39-205ENST00000397370 EXOSC9Q06265 439 aaKnown RBP20.84■□□□□ 0.93
RBM39-205ENST00000397370 TWISTNBQ3B726 338 aaPredicted RBP20.84■□□□□ 0.93
RBM39-205ENST00000397370 DZIP3Q86Y13 1208 aaKnown RBP20.84■□□□□ 0.93
RBM39-205ENST00000397370 CDCA7LQ96GN5 454 aa20.84■□□□□ 0.93
RBM39-205ENST00000397370 ARXQ96QS3 562 aa20.84■□□□□ 0.93
RBM39-205ENST00000397370 BCORQ6W2J9 1755 aa20.84■□□□□ 0.93
RBM39-205ENST00000397370 ANXA1P04083 346 aa20.83■□□□□ 0.93
RBM39-205ENST00000397370 PROSER3Q2NL68 480 aa20.83■□□□□ 0.93
RBM39-205ENST00000397370 LRP10Q7Z4F1 713 aa20.83■□□□□ 0.93
RBM39-205ENST00000397370 NLGN1Q8N2Q7 840 aa20.83■□□□□ 0.93
RBM39-205ENST00000397370 DDX21Q9NR30 783 aaKnown RBP eCLIP20.83■□□□□ 0.93
RBM39-205ENST00000397370 CHPF2Q9P2E5 772 aa20.83■□□□□ 0.93
RBM39-205ENST00000397370 POLD1P28340 1107 aa20.82■□□□□ 0.92
RBM39-205ENST00000397370 FKBP8Q14318 412 aa20.82■□□□□ 0.92
RBM39-205ENST00000397370 BCL2L12Q9HB09 334 aa20.82■□□□□ 0.92
RBM39-205ENST00000397370 CAMTA2O94983 1202 aa20.81■□□□□ 0.92
RBM39-205ENST00000397370 TRMT2AQ8IZ69 625 aaKnown RBP20.81■□□□□ 0.92
RBM39-205ENST00000397370 CHMP4AQ9BY43 222 aa20.81■□□□□ 0.92
RBM39-205ENST00000397370 DBF4Q9UBU7 674 aaPredicted RBP20.81■□□□□ 0.92
RBM39-205ENST00000397370 VAMP4O75379 141 aa20.8■□□□□ 0.92
RBM39-205ENST00000397370 CCDC30Q5VVM6 783 aa20.8■□□□□ 0.92
RBM39-205ENST00000397370 CACNA1FO60840 1977 aa20.79■□□□□ 0.92
RBM39-205ENST00000397370 TTLL7Q6ZT98 887 aa20.79■□□□□ 0.92
RBM39-205ENST00000397370 NUP98P52948 1817 aa20.78■□□□□ 0.92
RBM39-205ENST00000397370 MMP10P09238 476 aa20.78■□□□□ 0.92
RBM39-205ENST00000397370 HYPKQ9NX55 129 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms