RNA–Protein interactions for RNA: ENST00000396741.3

CYTH3-202, Transcript of cytohesin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CYTH3, Length 4,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-202ENST00000396741 XRCC6P12956 609 aaKnown RBP eCLIP17.51■□□□□ 0.39
CYTH3-202ENST00000396741 CCT2P78371 535 aaKnown RBP17.51■□□□□ 0.39
CYTH3-202ENST00000396741 TSR1Q2NL82 804 aaKnown RBP17.51■□□□□ 0.39
CYTH3-202ENST00000396741 METTL24Q5JXM2 366 aa17.51■□□□□ 0.39
CYTH3-202ENST00000396741 IFIT1P09914 478 aaKnown RBP17.5■□□□□ 0.39
CYTH3-202ENST00000396741 RAB11FIP4Q86YS3 637 aa17.5■□□□□ 0.39
CYTH3-202ENST00000396741 CKAP2LQ8IYA6 745 aa17.5■□□□□ 0.39
CYTH3-202ENST00000396741 NUP62CLQ9H1M0 184 aa17.5■□□□□ 0.39
CYTH3-202ENST00000396741 HYPKQ9NX55 129 aa17.5■□□□□ 0.39
CYTH3-202ENST00000396741 NPC1L1Q9UHC9 1359 aa17.5■□□□□ 0.39
CYTH3-202ENST00000396741 LETM1O95202 739 aaPredicted RBP17.5■□□□□ 0.39
CYTH3-202ENST00000396741 SART3Q15020 963 aaKnown RBP17.5■□□□□ 0.39
CYTH3-202ENST00000396741 COPS6Q7L5N1 327 aa17.5■□□□□ 0.39
CYTH3-202ENST00000396741 ZMYM4Q5VZL5 1548 aa17.5■□□□□ 0.39
CYTH3-202ENST00000396741 LRRC2Q9BYS8 371 aa17.5■□□□□ 0.39
CYTH3-202ENST00000396741 ABCC1P33527 1531 aa17.49■□□□□ 0.39
CYTH3-202ENST00000396741 PIK3R4Q99570 1358 aa17.49■□□□□ 0.39
CYTH3-202ENST00000396741 GOLIM4O00461 696 aa17.49■□□□□ 0.39
CYTH3-202ENST00000396741 TTLL5Q6EMB2 1281 aa17.49■□□□□ 0.39
CYTH3-202ENST00000396741 DDX46Q7L014 1031 aaKnown RBP17.49■□□□□ 0.39
CYTH3-202ENST00000396741 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.49■□□□□ 0.39
CYTH3-202ENST00000396741 MAST1Q9Y2H9 1570 aa17.49■□□□□ 0.39
CYTH3-202ENST00000396741 TPM1P09493 284 aa17.49■□□□□ 0.39
CYTH3-202ENST00000396741 BRPF1P55201 1214 aaPredicted RBP17.49■□□□□ 0.39
CYTH3-202ENST00000396741 XAGE3Q8WTP9 111 aa17.49■□□□□ 0.39
CYTH3-202ENST00000396741 ZNF396Q96N95 335 aaPredicted RBP17.49■□□□□ 0.39
CYTH3-202ENST00000396741 USP25Q9UHP3 1055 aa17.49■□□□□ 0.39
CYTH3-202ENST00000396741 BLMP54132 1417 aaPredicted RBP17.49■□□□□ 0.39
CYTH3-202ENST00000396741 ATP7AQ04656 1500 aa17.48■□□□□ 0.39
CYTH3-202ENST00000396741 NAT10Q9H0A0 1025 aaKnown RBP17.48■□□□□ 0.39
CYTH3-202ENST00000396741 ESYT1Q9BSJ8 1104 aa17.48■□□□□ 0.39
CYTH3-202ENST00000396741 HOOK1Q9UJC3 728 aaKnown RBP17.48■□□□□ 0.39
CYTH3-202ENST00000396741 HAND2P61296 217 aa17.48■□□□□ 0.39
CYTH3-202ENST00000396741 ATP8B2P98198 1209 aa17.48■□□□□ 0.39
CYTH3-202ENST00000396741 ZMYM3Q14202 1370 aa17.47■□□□□ 0.39
CYTH3-202ENST00000396741 KRT32Q14532 448 aa17.47■□□□□ 0.39
CYTH3-202ENST00000396741 ANKRD13DQ6ZTN6 518 aa17.47■□□□□ 0.39
CYTH3-202ENST00000396741 ZSCAN30Q86W11 494 aa17.47■□□□□ 0.39
CYTH3-202ENST00000396741 TMOD3Q9NYL9 352 aa17.47■□□□□ 0.39
CYTH3-202ENST00000396741 UGGT1Q9NYU2 1555 aa17.47■□□□□ 0.39
CYTH3-202ENST00000396741 GJB2P29033 226 aa17.46■□□□□ 0.39
CYTH3-202ENST00000396741 OLFM4Q6UX06 510 aa17.46■□□□□ 0.39
CYTH3-202ENST00000396741 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.46■□□□□ 0.39
CYTH3-202ENST00000396741 ADAMTS2O95450 1211 aa17.46■□□□□ 0.39
CYTH3-202ENST00000396741 CPA1P15085 419 aa17.46■□□□□ 0.39
CYTH3-202ENST00000396741 TDO2P48775 406 aa17.46■□□□□ 0.39
CYTH3-202ENST00000396741 NFATC2IPQ8NCF5 419 aa17.46■□□□□ 0.38
CYTH3-202ENST00000396741 LRP2BPQ9P2M1 347 aa17.46■□□□□ 0.38
CYTH3-202ENST00000396741 STX6O43752 255 aa17.45■□□□□ 0.38
CYTH3-202ENST00000396741 IFNL2Q8IZJ0 200 aa17.45■□□□□ 0.38
CYTH3-202ENST00000396741 TTC21AQ8NDW8 1320 aa17.45■□□□□ 0.38
CYTH3-202ENST00000396741 MEX3CQ5U5Q3 659 aaKnown RBP17.45■□□□□ 0.38
CYTH3-202ENST00000396741 A0A0U1RQG5 324 aaPredicted RBP17.45■□□□□ 0.38
CYTH3-202ENST00000396741 PIP4K2BP78356 416 aa17.45■□□□□ 0.38
CYTH3-202ENST00000396741 NOC3LQ8WTT2 800 aaKnown RBP17.45■□□□□ 0.38
CYTH3-202ENST00000396741 EVI5LQ96CN4 794 aa17.44■□□□□ 0.38
CYTH3-202ENST00000396741 FLT4P35916 1363 aa17.44■□□□□ 0.38
CYTH3-202ENST00000396741 STARD3NLO95772 234 aa17.44■□□□□ 0.38
CYTH3-202ENST00000396741 MAP3K11Q16584 847 aa17.44■□□□□ 0.38
CYTH3-202ENST00000396741 NCBP3Q53F19 620 aaKnown RBP17.44■□□□□ 0.38
CYTH3-202ENST00000396741 FAM177A1Q8N128 213 aaPredicted RBP17.44■□□□□ 0.38
CYTH3-202ENST00000396741 RAI14Q9P0K7 980 aa17.44■□□□□ 0.38
CYTH3-202ENST00000396741 MSH6P52701 1360 aa17.43■□□□□ 0.38
CYTH3-202ENST00000396741 CFAP45Q9UL16 551 aa17.43■□□□□ 0.38
CYTH3-202ENST00000396741 PLA2R1Q13018 1463 aa17.43■□□□□ 0.38
CYTH3-202ENST00000396741 XBP1P17861 261 aa17.43■□□□□ 0.38
CYTH3-202ENST00000396741 IFIT5Q13325 482 aaKnown RBP17.43■□□□□ 0.38
CYTH3-202ENST00000396741 KLHL40Q2TBA0 621 aa17.43■□□□□ 0.38
CYTH3-202ENST00000396741 AIDAQ96BJ3 306 aa17.43■□□□□ 0.38
CYTH3-202ENST00000396741 IMMTQ16891 758 aaKnown RBP17.43■□□□□ 0.38
CYTH3-202ENST00000396741 ANKRD20A12PQ8NF67 263 aa17.43■□□□□ 0.38
CYTH3-202ENST00000396741 LGR6Q9HBX8 967 aa17.43■□□□□ 0.38
CYTH3-202ENST00000396741 TRMT112Q9UI30 125 aaKnown RBP17.43■□□□□ 0.38
CYTH3-202ENST00000396741 U3KPZ7 1027 aaPredicted RBP17.43■□□□□ 0.38
CYTH3-202ENST00000396741 ATP10AO60312 1499 aa17.43■□□□□ 0.38
CYTH3-202ENST00000396741 GCP02774 474 aa17.42■□□□□ 0.38
CYTH3-202ENST00000396741 HOXC9P31274 260 aa17.42■□□□□ 0.38
CYTH3-202ENST00000396741 CTNNA3Q9UI47 895 aa17.42■□□□□ 0.38
CYTH3-202ENST00000396741 CCDC69A6NI79 296 aa17.42■□□□□ 0.38
CYTH3-202ENST00000396741 GRM8O00222 908 aa17.42■□□□□ 0.38
CYTH3-202ENST00000396741 NACAP1Q9BZK3 213 aa17.42■□□□□ 0.38
CYTH3-202ENST00000396741 MINDY4BA8MYZ0 360 aa17.42■□□□□ 0.38
CYTH3-202ENST00000396741 SERPINC1P01008 464 aa17.42■□□□□ 0.38
CYTH3-202ENST00000396741 HCLS1P14317 486 aaPredicted RBP17.42■□□□□ 0.38
CYTH3-202ENST00000396741 LMBR1LQ6UX01 489 aa17.42■□□□□ 0.38
CYTH3-202ENST00000396741 MNS1Q8NEH6 495 aa17.42■□□□□ 0.38
CYTH3-202ENST00000396741 IPO7O95373 1038 aaKnown RBP17.41■□□□□ 0.38
CYTH3-202ENST00000396741 ZSCAN23Q3MJ62 389 aa17.41■□□□□ 0.38
CYTH3-202ENST00000396741 TRIM22Q8IYM9 498 aa17.41■□□□□ 0.38
CYTH3-202ENST00000396741 PNMA6EA0A0J9YXQ4 647 aa17.41■□□□□ 0.38
CYTH3-202ENST00000396741 CHL1O00533 1208 aa17.41■□□□□ 0.38
CYTH3-202ENST00000396741 GIMAP6Q6P9H5 292 aa17.41■□□□□ 0.38
CYTH3-202ENST00000396741 KLHDC4Q8TBB5 520 aa17.41■□□□□ 0.38
CYTH3-202ENST00000396741 TRIM34Q9BYJ4 488 aa17.41■□□□□ 0.38
CYTH3-202ENST00000396741 SH2B1Q9NRF2 756 aaPredicted RBP17.41■□□□□ 0.38
CYTH3-202ENST00000396741 KDM5CP41229 1560 aa17.41■□□□□ 0.38
CYTH3-202ENST00000396741 SNRPA1P09661 255 aaKnown RBP17.4■□□□□ 0.38
CYTH3-202ENST00000396741 SNX21Q969T3 373 aa17.4■□□□□ 0.38
CYTH3-202ENST00000396741 USP26Q9BXU7 913 aa17.4■□□□□ 0.38
CYTH3-202ENST00000396741 KSR2Q6VAB6 950 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms